RNA–Protein interactions for RNA: ENST00000560747.5

NUSAP1-212, Transcript of nucleolar and spindle associated protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NUSAP1, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUSAP1-212ENST00000560747 NISCHQ9Y2I1 1504 aa19.65■□□□□ 0.74
NUSAP1-212ENST00000560747 AEBP2Q6ZN18 517 aaPredicted RBP18.3■□□□□ 0.52
NUSAP1-212ENST00000560747 CHIC1Q5VXU3 224 aa17.23■□□□□ 0.35
NUSAP1-212ENST00000560747 CCDC180Q9P1Z9 1646 aa16.94■□□□□ 0.3
NUSAP1-212ENST00000560747 ZCCHC6Q5VYS8 1495 aaKnown RBP16.54■□□□□ 0.24
NUSAP1-212ENST00000560747 SHROOM4Q9ULL8 1493 aa16.3■□□□□ 0.2
NUSAP1-212ENST00000560747 DCAF8L2P0C7V8 631 aa16.25■□□□□ 0.19
NUSAP1-212ENST00000560747 DCAF1Q9Y4B6 1507 aa16.17■□□□□ 0.18
NUSAP1-212ENST00000560747 ABCC9O60706 1549 aa16.01■□□□□ 0.15
NUSAP1-212ENST00000560747 MYO15BQ96JP2 1530 aa15.88■□□□□ 0.13
NUSAP1-212ENST00000560747 SENP3Q9H4L4 574 aaPredicted RBP15.78■□□□□ 0.12
NUSAP1-212ENST00000560747 NACADO15069 1562 aa15.75■□□□□ 0.11
NUSAP1-212ENST00000560747 SUPT5HO00267 1087 aaKnown RBP15.75■□□□□ 0.11
NUSAP1-212ENST00000560747 SCRIBQ14160 1630 aa15.74■□□□□ 0.11
NUSAP1-212ENST00000560747 PELP1Q8IZL8 1130 aaKnown RBP15.71■□□□□ 0.11
NUSAP1-212ENST00000560747 MYT1Q01538 1121 aa15.59■□□□□ 0.09
NUSAP1-212ENST00000560747 RB1CC1Q8TDY2 1594 aa15.58■□□□□ 0.08
NUSAP1-212ENST00000560747 PHF23Q9BUL5 403 aaPredicted RBP15.48■□□□□ 0.07
NUSAP1-212ENST00000560747 RSF1Q96T23 1441 aaPredicted RBP15.36■□□□□ 0.05
NUSAP1-212ENST00000560747 UNC13AQ9UPW8 1703 aa15.35■□□□□ 0.05
NUSAP1-212ENST00000560747 CECR2Q9BXF3 1484 aa15.35■□□□□ 0.05
NUSAP1-212ENST00000560747 MROH2BQ7Z745 1585 aa15.25■□□□□ 0.03
NUSAP1-212ENST00000560747 BICRAQ9NZM4 1560 aa15.21■□□□□ 0.03
NUSAP1-212ENST00000560747 TTBK1Q5TCY1 1321 aaPredicted RBP15.21■□□□□ 0.03
NUSAP1-212ENST00000560747 PABPN1Q86U42 306 aaKnown RBP eCLIP15.19■□□□□ 0.02
NUSAP1-212ENST00000560747 WIZO95785 1651 aa15.12■□□□□ 0.01
NUSAP1-212ENST00000560747 BAZ1AQ9NRL2 1556 aaPredicted RBP15.11■□□□□ 0.01
NUSAP1-212ENST00000560747 SMARCA4P51532 1647 aa15.05■□□□□ 0
NUSAP1-212ENST00000560747 SLC24A1O60721 1099 aa15□□□□□ -0.01
NUSAP1-212ENST00000560747 TOP2AP11388 1531 aaKnown RBP14.9□□□□□ -0.02
NUSAP1-212ENST00000560747 PRKCSHP14314 528 aaPredicted RBP14.9□□□□□ -0.02
NUSAP1-212ENST00000560747 PEG3Q9GZU2 1588 aa14.83□□□□□ -0.04
NUSAP1-212ENST00000560747 CCDC88BA6NC98 1476 aa14.82□□□□□ -0.04
NUSAP1-212ENST00000560747 SMARCA2P51531 1590 aa14.81□□□□□ -0.04
NUSAP1-212ENST00000560747 ATAD2BQ9ULI0 1458 aa14.79□□□□□ -0.04
NUSAP1-212ENST00000560747 EIF4G1Q04637 1599 aaKnown RBP14.78□□□□□ -0.04
NUSAP1-212ENST00000560747 TRIM41Q8WV44 630 aa14.72□□□□□ -0.05
NUSAP1-212ENST00000560747 APLP2Q06481 763 aa14.69□□□□□ -0.06
NUSAP1-212ENST00000560747 FOXD1Q16676 465 aa14.68□□□□□ -0.06
NUSAP1-212ENST00000560747 BAZ1BQ9UIG0 1483 aaKnown RBP14.68□□□□□ -0.06
NUSAP1-212ENST00000560747 LOC105371045A0A1W2PR82 267 aa14.67□□□□□ -0.06
NUSAP1-212ENST00000560747 ABCC8Q09428 1581 aa14.6□□□□□ -0.07
NUSAP1-212ENST00000560747 NCAPD3P42695 1498 aa14.59□□□□□ -0.07
NUSAP1-212ENST00000560747 FAM9AQ8IZU1 332 aaPredicted RBP14.55□□□□□ -0.08
NUSAP1-212ENST00000560747 HMGXB3Q12766 1538 aa14.55□□□□□ -0.08
NUSAP1-212ENST00000560747 ERICH6Q7L0X2 663 aa14.54□□□□□ -0.08
NUSAP1-212ENST00000560747 CC2D2AQ9P2K1 1620 aa14.45□□□□□ -0.1
NUSAP1-212ENST00000560747 WRNQ14191 1432 aaPredicted RBP eCLIP14.41□□□□□ -0.1
NUSAP1-212ENST00000560747 EHMT2Q96KQ7 1210 aa14.4□□□□□ -0.1
NUSAP1-212ENST00000560747 SYNJ1O43426 1573 aa14.39□□□□□ -0.11
NUSAP1-212ENST00000560747 SOGA1O94964 1423 aa14.38□□□□□ -0.11
NUSAP1-212ENST00000560747 RUSC2Q8N2Y8 1516 aa14.35□□□□□ -0.11
NUSAP1-212ENST00000560747 CFTRP13569 1480 aa14.33□□□□□ -0.11
NUSAP1-212ENST00000560747 DAXXQ9UER7 740 aaPredicted RBP14.26□□□□□ -0.13
NUSAP1-212ENST00000560747 TOP2BQ02880 1626 aa14.25□□□□□ -0.13
NUSAP1-212ENST00000560747 CADPSQ9ULU8 1353 aa14.24□□□□□ -0.13
NUSAP1-212ENST00000560747 CUX1P39880 1505 aa14.23□□□□□ -0.13
NUSAP1-212ENST00000560747 CSRNP3Q8WYN3 585 aa14.23□□□□□ -0.13
NUSAP1-212ENST00000560747 DNAJC5BQ9UF47 199 aa14.23□□□□□ -0.13
NUSAP1-212ENST00000560747 EEA1Q15075 1411 aa14.22□□□□□ -0.13
NUSAP1-212ENST00000560747 BIVM-ERCC5R4GMW8 1640 aa14.22□□□□□ -0.13
NUSAP1-212ENST00000560747 POTEDQ86YR6 584 aa14.19□□□□□ -0.14
NUSAP1-212ENST00000560747 BCL11AQ9H165 835 aa14.18□□□□□ -0.14
NUSAP1-212ENST00000560747 PRDM2Q13029 1718 aa14.18□□□□□ -0.14
NUSAP1-212ENST00000560747 NESP48681 1621 aa14.15□□□□□ -0.14
NUSAP1-212ENST00000560747 PCGF6Q9BYE7 350 aa14.14□□□□□ -0.15
NUSAP1-212ENST00000560747 TNIKQ9UKE5 1360 aa14.1□□□□□ -0.15
NUSAP1-212ENST00000560747 FANCD2Q9BXW9 1451 aa14.1□□□□□ -0.15
NUSAP1-212ENST00000560747 GOLGA3Q08378 1498 aa14.09□□□□□ -0.15
NUSAP1-212ENST00000560747 KIF21BO75037 1637 aa14.08□□□□□ -0.16
NUSAP1-212ENST00000560747 CEP162Q5TB80 1403 aa14.08□□□□□ -0.16
NUSAP1-212ENST00000560747 UBTFP17480 764 aaKnown RBP14.07□□□□□ -0.16
NUSAP1-212ENST00000560747 CEP164Q9UPV0 1460 aa14.06□□□□□ -0.16
NUSAP1-212ENST00000560747 RAPGEF2Q9Y4G8 1499 aa14.05□□□□□ -0.16
NUSAP1-212ENST00000560747 FGD5Q6ZNL6 1462 aa14.02□□□□□ -0.17
NUSAP1-212ENST00000560747 LAMC3Q9Y6N6 1575 aa14.01□□□□□ -0.17
NUSAP1-212ENST00000560747 TRIM26Q12899 539 aaPredicted RBP14.01□□□□□ -0.17
NUSAP1-212ENST00000560747 KIF27Q86VH2 1401 aa14□□□□□ -0.17
NUSAP1-212ENST00000560747 PRXQ9BXM0 1461 aa14□□□□□ -0.17
NUSAP1-212ENST00000560747 PPARGC1BQ86YN6 1023 aaKnown RBP13.99□□□□□ -0.17
NUSAP1-212ENST00000560747 MSH5O43196 834 aa13.98□□□□□ -0.17
NUSAP1-212ENST00000560747 TOPBP1Q92547 1522 aa13.97□□□□□ -0.17
NUSAP1-212ENST00000560747 DNMBPQ6XZF7 1577 aa13.97□□□□□ -0.17
NUSAP1-212ENST00000560747 CUX2O14529 1486 aa13.97□□□□□ -0.17
NUSAP1-212ENST00000560747 URB2Q14146 1524 aaKnown RBP13.95□□□□□ -0.18
NUSAP1-212ENST00000560747 RAD54L2Q9Y4B4 1467 aa13.94□□□□□ -0.18
NUSAP1-212ENST00000560747 IGF1RP08069 1367 aa13.93□□□□□ -0.18
NUSAP1-212ENST00000560747 ERICH3Q5RHP9 1530 aa13.93□□□□□ -0.18
NUSAP1-212ENST00000560747 POLA1P09884 1462 aaPredicted RBP13.93□□□□□ -0.18
NUSAP1-212ENST00000560747 HRCP23327 699 aa13.93□□□□□ -0.18
NUSAP1-212ENST00000560747 PDS5BQ9NTI5 1447 aa13.92□□□□□ -0.18
NUSAP1-212ENST00000560747 CLIP1P30622 1438 aa13.91□□□□□ -0.18
NUSAP1-212ENST00000560747 SCAF1Q9H7N4 1312 aaKnown RBP13.91□□□□□ -0.18
NUSAP1-212ENST00000560747 KIF21AQ7Z4S6 1674 aa13.9□□□□□ -0.18
NUSAP1-212ENST00000560747 RANGAP1P46060 587 aaPredicted RBP13.88□□□□□ -0.19
NUSAP1-212ENST00000560747 ABCA10Q8WWZ4 1543 aa13.87□□□□□ -0.19
NUSAP1-212ENST00000560747 CARMIL1Q5VZK9 1371 aa13.83□□□□□ -0.2
NUSAP1-212ENST00000560747 WDR97A6NE52 1622 aa13.8□□□□□ -0.2
NUSAP1-212ENST00000560747 VPS8Q8N3P4 1428 aa13.8□□□□□ -0.2
NUSAP1-212ENST00000560747 ARAP1Q96P48 1450 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms