RNA–Protein interactions for RNA: ENST00000567278.1

COTL1-205, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 2

Gene COTL1, Length 5,330 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-205ENST00000567278 DCAF8L2P0C7V8 631 aa19.17■□□□□ 0.66
COTL1-205ENST00000567278 SUPT5HO00267 1087 aaKnown RBP18.78■□□□□ 0.6
COTL1-205ENST00000567278 PELP1Q8IZL8 1130 aaKnown RBP18.59■□□□□ 0.57
COTL1-205ENST00000567278 NISCHQ9Y2I1 1504 aa18.33■□□□□ 0.53
COTL1-205ENST00000567278 SHROOM4Q9ULL8 1493 aa18.25■□□□□ 0.51
COTL1-205ENST00000567278 PCGF6Q9BYE7 350 aa18.11■□□□□ 0.49
COTL1-205ENST00000567278 EHMT2Q96KQ7 1210 aa18.09■□□□□ 0.49
COTL1-205ENST00000567278 MYT1Q01538 1121 aa18.03■□□□□ 0.48
COTL1-205ENST00000567278 CENPBP07199 599 aaPredicted RBP18.01■□□□□ 0.47
COTL1-205ENST00000567278 ZEB1P37275 1124 aaPredicted RBP17.93■□□□□ 0.46
COTL1-205ENST00000567278 APLP2Q06481 763 aa17.85■□□□□ 0.45
COTL1-205ENST00000567278 ERICH6Q7L0X2 663 aa17.79■□□□□ 0.44
COTL1-205ENST00000567278 CCER1Q8TC90 406 aaPredicted RBP17.71■□□□□ 0.43
COTL1-205ENST00000567278 FAM9AQ8IZU1 332 aaPredicted RBP17.7■□□□□ 0.42
COTL1-205ENST00000567278 TTBK1Q5TCY1 1321 aaPredicted RBP17.6■□□□□ 0.41
COTL1-205ENST00000567278 HRCP23327 699 aa17.47■□□□□ 0.39
COTL1-205ENST00000567278 NEFLP07196 543 aa17.43■□□□□ 0.38
COTL1-205ENST00000567278 YTHDC1Q96MU7 727 aaKnown RBP17.42■□□□□ 0.38
COTL1-205ENST00000567278 TRIM41Q8WV44 630 aa17.38■□□□□ 0.37
COTL1-205ENST00000567278 TRIM26Q12899 539 aaPredicted RBP17.3■□□□□ 0.36
COTL1-205ENST00000567278 RANGAP1P46060 587 aaPredicted RBP17.15■□□□□ 0.34
COTL1-205ENST00000567278 UBTFP17480 764 aaKnown RBP17.11■□□□□ 0.33
COTL1-205ENST00000567278 PPARGC1BQ86YN6 1023 aaKnown RBP17.03■□□□□ 0.32
COTL1-205ENST00000567278 ATP1B4Q9UN42 357 aaPredicted RBP16.95■□□□□ 0.3
COTL1-205ENST00000567278 CHIC1Q5VXU3 224 aa16.87■□□□□ 0.29
COTL1-205ENST00000567278 DAXXQ9UER7 740 aaPredicted RBP16.86■□□□□ 0.29
COTL1-205ENST00000567278 LOC105371045A0A1W2PR82 267 aa16.85■□□□□ 0.29
COTL1-205ENST00000567278 DIEXFQ68CQ4 756 aaKnown RBP16.83■□□□□ 0.29
COTL1-205ENST00000567278 RTL5Q5HYW3 569 aaPredicted RBP16.72■□□□□ 0.27
COTL1-205ENST00000567278 GTF3C3Q9Y5Q9 886 aa16.72■□□□□ 0.27
COTL1-205ENST00000567278 HNRNPUL2Q1KMD3 747 aaKnown RBP16.69■□□□□ 0.26
COTL1-205ENST00000567278 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.68■□□□□ 0.26
COTL1-205ENST00000567278 ITGAEP38570 1179 aa16.62■□□□□ 0.25
COTL1-205ENST00000567278 POLR3GLQ9BT43 218 aa16.55■□□□□ 0.24
COTL1-205ENST00000567278 ACIN1Q9UKV3 1341 aaKnown RBP16.51■□□□□ 0.23
COTL1-205ENST00000567278 ZNF316A6NFI3 1004 aaPredicted RBP16.49■□□□□ 0.23
COTL1-205ENST00000567278 BCANQ96GW7 911 aa16.46■□□□□ 0.22
COTL1-205ENST00000567278 CNGB1Q14028 1251 aaPredicted RBP16.41■□□□□ 0.22
COTL1-205ENST00000567278 CDK11AQ9UQ88 783 aaPredicted RBP16.4■□□□□ 0.22
COTL1-205ENST00000567278 CLSPNQ9HAW4 1339 aa16.37■□□□□ 0.21
COTL1-205ENST00000567278 ANP32CO43423 234 aa16.27■□□□□ 0.2
COTL1-205ENST00000567278 NEUROD1Q13562 356 aa16.18■□□□□ 0.18
COTL1-205ENST00000567278 FAM50AQ14320 339 aaKnown RBP16.16■□□□□ 0.18
COTL1-205ENST00000567278 ANP32AP39687 249 aaKnown RBP16.13■□□□□ 0.17
COTL1-205ENST00000567278 MYT1LQ9UL68 1186 aa16.08■□□□□ 0.16
COTL1-205ENST00000567278 TRIM52Q96A61 297 aa16.06■□□□□ 0.16
COTL1-205ENST00000567278 SCAF1Q9H7N4 1312 aaKnown RBP16.06■□□□□ 0.16
COTL1-205ENST00000567278 SLC4A1APQ9BWU0 796 aaKnown RBP16.04■□□□□ 0.16
COTL1-205ENST00000567278 FKBP8Q14318 412 aa16.03■□□□□ 0.16
COTL1-205ENST00000567278 EIF5BO60841 1220 aaKnown RBP16.02■□□□□ 0.16
COTL1-205ENST00000567278 DCAF1Q9Y4B6 1507 aa15.98■□□□□ 0.15
COTL1-205ENST00000567278 NPM2Q86SE8 214 aaKnown RBP15.94■□□□□ 0.14
COTL1-205ENST00000567278 ZNF326Q5BKZ1 582 aaKnown RBP15.9■□□□□ 0.14
COTL1-205ENST00000567278 GLIPR1L2Q4G1C9 344 aa15.9■□□□□ 0.14
COTL1-205ENST00000567278 ZBTB47Q9UFB7 747 aaPredicted RBP15.89■□□□□ 0.13
COTL1-205ENST00000567278 CANXP27824 592 aaKnown RBP15.86■□□□□ 0.13
COTL1-205ENST00000567278 HNRNPUQ00839 825 aaKnown RBP eCLIP15.82■□□□□ 0.12
COTL1-205ENST00000567278 CSRNP3Q8WYN3 585 aa15.8■□□□□ 0.12
COTL1-205ENST00000567278 NBR1Q14596 966 aa15.79■□□□□ 0.12
COTL1-205ENST00000567278 ANP32BQ92688 251 aaKnown RBP15.79■□□□□ 0.12
COTL1-205ENST00000567278 DDX10Q13206 875 aaKnown RBP15.76■□□□□ 0.11
COTL1-205ENST00000567278 MIER1Q8N108 512 aa15.75■□□□□ 0.11
COTL1-205ENST00000567278 ANP32EQ9BTT0 268 aa15.74■□□□□ 0.11
COTL1-205ENST00000567278 CCDC136Q96JN2 1154 aa15.71■□□□□ 0.11
COTL1-205ENST00000567278 TONSLQ96HA7 1378 aa15.69■□□□□ 0.1
COTL1-205ENST00000567278 UPF2Q9HAU5 1272 aaKnown RBP15.69■□□□□ 0.1
COTL1-205ENST00000567278 FAM9BQ8IZU0 186 aa15.68■□□□□ 0.1
COTL1-205ENST00000567278 BCL11AQ9H165 835 aa15.66■□□□□ 0.1
COTL1-205ENST00000567278 HSP90AA1P07900 732 aaKnown RBP15.64■□□□□ 0.1
COTL1-205ENST00000567278 NEFMP07197 916 aa15.62■□□□□ 0.09
COTL1-205ENST00000567278 IRX6P78412 446 aaPredicted RBP15.56■□□□□ 0.08
COTL1-205ENST00000567278 P3H3Q8IVL6 736 aa15.55■□□□□ 0.08
COTL1-205ENST00000567278 MRS2Q9HD23 443 aa15.54■□□□□ 0.08
COTL1-205ENST00000567278 TMC1Q8TDI8 760 aa15.53■□□□□ 0.08
COTL1-205ENST00000567278 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.52■□□□□ 0.08
COTL1-205ENST00000567278 ARXQ96QS3 562 aa15.52■□□□□ 0.07
COTL1-205ENST00000567278 SALL2Q9Y467 1007 aaPredicted RBP15.51■□□□□ 0.07
COTL1-205ENST00000567278 DDRGK1Q96HY6 314 aa15.48■□□□□ 0.07
COTL1-205ENST00000567278 PABPN1Q86U42 306 aaKnown RBP eCLIP15.47■□□□□ 0.07
COTL1-205ENST00000567278 SLC24A1O60721 1099 aa15.45■□□□□ 0.06
COTL1-205ENST00000567278 CCDC180Q9P1Z9 1646 aa15.42■□□□□ 0.06
COTL1-205ENST00000567278 MYO15BQ96JP2 1530 aa15.42■□□□□ 0.06
COTL1-205ENST00000567278 PPM1GO15355 546 aaPredicted RBP15.4■□□□□ 0.06
COTL1-205ENST00000567278 ARID3CA6NKF2 412 aa15.4■□□□□ 0.06
COTL1-205ENST00000567278 ZNF777Q9ULD5 760 aaPredicted RBP15.4■□□□□ 0.06
COTL1-205ENST00000567278 SUPT16HQ9Y5B9 1047 aaKnown RBP15.4■□□□□ 0.06
COTL1-205ENST00000567278 BECN1Q14457 450 aa15.39■□□□□ 0.05
COTL1-205ENST00000567278 ERICH6BQ5W0A0 696 aa15.39■□□□□ 0.05
COTL1-205ENST00000567278 TRIM44Q96DX7 344 aaPredicted RBP15.39■□□□□ 0.05
COTL1-205ENST00000567278 HIRIP3Q9BW71 556 aaPredicted RBP15.38■□□□□ 0.05
COTL1-205ENST00000567278 WDR43Q15061 677 aaKnown RBP eCLIP15.36■□□□□ 0.05
COTL1-205ENST00000567278 EIF4G2P78344 907 aaKnown RBP eCLIP15.35■□□□□ 0.05
COTL1-205ENST00000567278 ABCC9O60706 1549 aa15.34■□□□□ 0.05
COTL1-205ENST00000567278 NOP58Q9Y2X3 529 aaKnown RBP15.34■□□□□ 0.05
COTL1-205ENST00000567278 PPP4R2Q9NY27 417 aa15.33■□□□□ 0.04
COTL1-205ENST00000567278 RTN4Q9NQC3 1192 aaKnown RBP15.31■□□□□ 0.04
COTL1-205ENST00000567278 FBLN2P98095 1184 aa15.29■□□□□ 0.04
COTL1-205ENST00000567278 TNNT2P45379 298 aaPredicted RBP15.28■□□□□ 0.04
COTL1-205ENST00000567278 CHIC2Q9UKJ5 165 aa15.28■□□□□ 0.04
COTL1-205ENST00000567278 CLIP1P30622 1438 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms