RNA–Protein interactions for RNA: ENST00000559596.5

NUSAP1-208, Transcript of nucleolar and spindle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NUSAP1, Length 1,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUSAP1-208ENST00000559596 NISCHQ9Y2I1 1504 aa28.19■■■□□ 2.1
NUSAP1-208ENST00000559596 CCDC180Q9P1Z9 1646 aa24.27■■□□□ 1.48
NUSAP1-208ENST00000559596 ZCCHC6Q5VYS8 1495 aaKnown RBP23.83■■□□□ 1.4
NUSAP1-208ENST00000559596 SHROOM4Q9ULL8 1493 aa23.49■■□□□ 1.35
NUSAP1-208ENST00000559596 DCAF1Q9Y4B6 1507 aa23.33■■□□□ 1.33
NUSAP1-208ENST00000559596 AEBP2Q6ZN18 517 aaPredicted RBP23.24■■□□□ 1.31
NUSAP1-208ENST00000559596 DCAF8L2P0C7V8 631 aa23.09■■□□□ 1.29
NUSAP1-208ENST00000559596 SUPT5HO00267 1087 aaKnown RBP22.99■■□□□ 1.27
NUSAP1-208ENST00000559596 MYO15BQ96JP2 1530 aa22.8■■□□□ 1.24
NUSAP1-208ENST00000559596 ABCC9O60706 1549 aa22.45■■□□□ 1.19
NUSAP1-208ENST00000559596 NACADO15069 1562 aa22.45■■□□□ 1.18
NUSAP1-208ENST00000559596 SCRIBQ14160 1630 aa22.41■■□□□ 1.18
NUSAP1-208ENST00000559596 CHIC1Q5VXU3 224 aa22.37■■□□□ 1.17
NUSAP1-208ENST00000559596 RSF1Q96T23 1441 aaPredicted RBP22.14■■□□□ 1.14
NUSAP1-208ENST00000559596 RB1CC1Q8TDY2 1594 aa22.09■■□□□ 1.13
NUSAP1-208ENST00000559596 CECR2Q9BXF3 1484 aa21.81■■□□□ 1.08
NUSAP1-208ENST00000559596 MROH2BQ7Z745 1585 aa21.79■■□□□ 1.08
NUSAP1-208ENST00000559596 BAZ1AQ9NRL2 1556 aaPredicted RBP21.74■■□□□ 1.07
NUSAP1-208ENST00000559596 WIZO95785 1651 aa21.65■■□□□ 1.06
NUSAP1-208ENST00000559596 UNC13AQ9UPW8 1703 aa21.6■■□□□ 1.05
NUSAP1-208ENST00000559596 TRIM41Q8WV44 630 aa21.6■■□□□ 1.05
NUSAP1-208ENST00000559596 SMARCA4P51532 1647 aa21.53■■□□□ 1.04
NUSAP1-208ENST00000559596 LOC105371045A0A1W2PR82 267 aa21.51■■□□□ 1.03
NUSAP1-208ENST00000559596 TOP2AP11388 1531 aaKnown RBP21.48■■□□□ 1.03
NUSAP1-208ENST00000559596 EIF4G1Q04637 1599 aaKnown RBP21.37■■□□□ 1.01
NUSAP1-208ENST00000559596 PCGF6Q9BYE7 350 aa21.35■■□□□ 1.01
NUSAP1-208ENST00000559596 BICRAQ9NZM4 1560 aa21.34■■□□□ 1.01
NUSAP1-208ENST00000559596 HRCP23327 699 aa21.33■■□□□ 1.01
NUSAP1-208ENST00000559596 SMARCA2P51531 1590 aa21.28■■□□□ 1
NUSAP1-208ENST00000559596 CCDC88BA6NC98 1476 aa21.26■□□□□ 0.99
NUSAP1-208ENST00000559596 PEG3Q9GZU2 1588 aa21.23■□□□□ 0.99
NUSAP1-208ENST00000559596 TRIM26Q12899 539 aaPredicted RBP21.21■□□□□ 0.99
NUSAP1-208ENST00000559596 FAM9AQ8IZU1 332 aaPredicted RBP21.18■□□□□ 0.98
NUSAP1-208ENST00000559596 PABPN1Q86U42 306 aaKnown RBP eCLIP21.16■□□□□ 0.98
NUSAP1-208ENST00000559596 ABCC8Q09428 1581 aa21.02■□□□□ 0.96
NUSAP1-208ENST00000559596 ATAD2BQ9ULI0 1458 aa20.99■□□□□ 0.95
NUSAP1-208ENST00000559596 EEA1Q15075 1411 aa20.98■□□□□ 0.95
NUSAP1-208ENST00000559596 BAZ1BQ9UIG0 1483 aaKnown RBP20.95■□□□□ 0.94
NUSAP1-208ENST00000559596 WRNQ14191 1432 aaPredicted RBP eCLIP20.85■□□□□ 0.93
NUSAP1-208ENST00000559596 EHMT2Q96KQ7 1210 aa20.84■□□□□ 0.93
NUSAP1-208ENST00000559596 ZEB1P37275 1124 aaPredicted RBP20.82■□□□□ 0.92
NUSAP1-208ENST00000559596 POTEDQ86YR6 584 aa20.8■□□□□ 0.92
NUSAP1-208ENST00000559596 SOGA1O94964 1423 aa20.78■□□□□ 0.92
NUSAP1-208ENST00000559596 TNIKQ9UKE5 1360 aa20.76■□□□□ 0.91
NUSAP1-208ENST00000559596 CSRNP3Q8WYN3 585 aa20.75■□□□□ 0.91
NUSAP1-208ENST00000559596 HMGXB3Q12766 1538 aa20.74■□□□□ 0.91
NUSAP1-208ENST00000559596 GOLGA3Q08378 1498 aa20.71■□□□□ 0.91
NUSAP1-208ENST00000559596 SYNJ1O43426 1573 aa20.7■□□□□ 0.9
NUSAP1-208ENST00000559596 NCAPD3P42695 1498 aa20.69■□□□□ 0.9
NUSAP1-208ENST00000559596 CEP162Q5TB80 1403 aa20.69■□□□□ 0.9
NUSAP1-208ENST00000559596 PPARGC1BQ86YN6 1023 aaKnown RBP20.64■□□□□ 0.9
NUSAP1-208ENST00000559596 CEP164Q9UPV0 1460 aa20.63■□□□□ 0.89
NUSAP1-208ENST00000559596 RUSC2Q8N2Y8 1516 aa20.63■□□□□ 0.89
NUSAP1-208ENST00000559596 KIF21BO75037 1637 aa20.63■□□□□ 0.89
NUSAP1-208ENST00000559596 TOP2BQ02880 1626 aa20.59■□□□□ 0.89
NUSAP1-208ENST00000559596 UBTFP17480 764 aaKnown RBP20.57■□□□□ 0.88
NUSAP1-208ENST00000559596 BIVM-ERCC5R4GMW8 1640 aa20.55■□□□□ 0.88
NUSAP1-208ENST00000559596 CFTRP13569 1480 aa20.44■□□□□ 0.86
NUSAP1-208ENST00000559596 PRDM2Q13029 1718 aa20.39■□□□□ 0.85
NUSAP1-208ENST00000559596 CLIP1P30622 1438 aa20.39■□□□□ 0.85
NUSAP1-208ENST00000559596 ERICH3Q5RHP9 1530 aa20.37■□□□□ 0.85
NUSAP1-208ENST00000559596 RAPGEF2Q9Y4G8 1499 aa20.34■□□□□ 0.85
NUSAP1-208ENST00000559596 CUX1P39880 1505 aa20.33■□□□□ 0.84
NUSAP1-208ENST00000559596 VPS8Q8N3P4 1428 aa20.31■□□□□ 0.84
NUSAP1-208ENST00000559596 KIF27Q86VH2 1401 aa20.29■□□□□ 0.84
NUSAP1-208ENST00000559596 PRXQ9BXM0 1461 aa20.29■□□□□ 0.84
NUSAP1-208ENST00000559596 CCER1Q8TC90 406 aaPredicted RBP20.27■□□□□ 0.83
NUSAP1-208ENST00000559596 CADPSQ9ULU8 1353 aa20.23■□□□□ 0.83
NUSAP1-208ENST00000559596 APLP2Q06481 763 aa20.21■□□□□ 0.83
NUSAP1-208ENST00000559596 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.19■□□□□ 0.82
NUSAP1-208ENST00000559596 CC2D2AQ9P2K1 1620 aa20.19■□□□□ 0.82
NUSAP1-208ENST00000559596 TTBK1Q5TCY1 1321 aaPredicted RBP20.17■□□□□ 0.82
NUSAP1-208ENST00000559596 SENP3Q9H4L4 574 aaPredicted RBP20.16■□□□□ 0.82
NUSAP1-208ENST00000559596 CUX2O14529 1486 aa20.05■□□□□ 0.8
NUSAP1-208ENST00000559596 ARAP1Q96P48 1450 aa20.05■□□□□ 0.8
NUSAP1-208ENST00000559596 FGD5Q6ZNL6 1462 aa20.02■□□□□ 0.8
NUSAP1-208ENST00000559596 FANCD2Q9BXW9 1451 aa20.01■□□□□ 0.79
NUSAP1-208ENST00000559596 RANGAP1P46060 587 aaPredicted RBP19.98■□□□□ 0.79
NUSAP1-208ENST00000559596 IGF1RP08069 1367 aa19.98■□□□□ 0.79
NUSAP1-208ENST00000559596 DNMBPQ6XZF7 1577 aa19.97■□□□□ 0.79
NUSAP1-208ENST00000559596 CARMIL1Q5VZK9 1371 aa19.93■□□□□ 0.78
NUSAP1-208ENST00000559596 ARHGAP35Q9NRY4 1499 aa19.92■□□□□ 0.78
NUSAP1-208ENST00000559596 LAMC3Q9Y6N6 1575 aa19.89■□□□□ 0.78
NUSAP1-208ENST00000559596 HNRNPUL2Q1KMD3 747 aaKnown RBP19.89■□□□□ 0.77
NUSAP1-208ENST00000559596 ABCA10Q8WWZ4 1543 aa19.87■□□□□ 0.77
NUSAP1-208ENST00000559596 TOPBP1Q92547 1522 aa19.86■□□□□ 0.77
NUSAP1-208ENST00000559596 MAP3K1Q13233 1512 aa19.85■□□□□ 0.77
NUSAP1-208ENST00000559596 RRBP1Q9P2E9 1410 aaKnown RBP19.81■□□□□ 0.76
NUSAP1-208ENST00000559596 POLA1P09884 1462 aaPredicted RBP19.81■□□□□ 0.76
NUSAP1-208ENST00000559596 CUL7Q14999 1698 aa19.81■□□□□ 0.76
NUSAP1-208ENST00000559596 CLSPNQ9HAW4 1339 aa19.78■□□□□ 0.76
NUSAP1-208ENST00000559596 FHAD1B1AJZ9 1412 aa19.78■□□□□ 0.76
NUSAP1-208ENST00000559596 NESP48681 1621 aa19.77■□□□□ 0.76
NUSAP1-208ENST00000559596 KANK4Q5T7N3 995 aaPredicted RBP19.76■□□□□ 0.75
NUSAP1-208ENST00000559596 RAD54L2Q9Y4B4 1467 aa19.74■□□□□ 0.75
NUSAP1-208ENST00000559596 TIAM1Q13009 1591 aa19.74■□□□□ 0.75
NUSAP1-208ENST00000559596 PDS5BQ9NTI5 1447 aa19.74■□□□□ 0.75
NUSAP1-208ENST00000559596 DIEXFQ68CQ4 756 aaKnown RBP19.73■□□□□ 0.75
NUSAP1-208ENST00000559596 EFCAB5A4FU69 1503 aa19.73■□□□□ 0.75
NUSAP1-208ENST00000559596 ZNF316A6NFI3 1004 aaPredicted RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms