RNA–Protein interactions for RNA: ENST00000560177.5

NUSAP1-210, Transcript of nucleolar and spindle associated protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NUSAP1, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUSAP1-210ENST00000560177 AEBP2Q6ZN18 517 aaPredicted RBP19.25■□□□□ 0.67
NUSAP1-210ENST00000560177 CHIC1Q5VXU3 224 aa17.84■□□□□ 0.45
NUSAP1-210ENST00000560177 NISCHQ9Y2I1 1504 aa16.64■□□□□ 0.25
NUSAP1-210ENST00000560177 SENP3Q9H4L4 574 aaPredicted RBP16.35■□□□□ 0.21
NUSAP1-210ENST00000560177 PHF23Q9BUL5 403 aaPredicted RBP16.15■□□□□ 0.18
NUSAP1-210ENST00000560177 FOXD1Q16676 465 aa15.39■□□□□ 0.05
NUSAP1-210ENST00000560177 POTEDQ86YR6 584 aa14.9□□□□□ -0.02
NUSAP1-210ENST00000560177 PELP1Q8IZL8 1130 aaKnown RBP14.78□□□□□ -0.04
NUSAP1-210ENST00000560177 CCDC180Q9P1Z9 1646 aa14.76□□□□□ -0.05
NUSAP1-210ENST00000560177 MYT1Q01538 1121 aa14.57□□□□□ -0.08
NUSAP1-210ENST00000560177 MSH5O43196 834 aa14.43□□□□□ -0.1
NUSAP1-210ENST00000560177 ABCC9O60706 1549 aa14.36□□□□□ -0.11
NUSAP1-210ENST00000560177 PIAS4Q8N2W9 510 aaPredicted RBP14.29□□□□□ -0.12
NUSAP1-210ENST00000560177 PPP6R1Q9UPN7 881 aa14.13□□□□□ -0.15
NUSAP1-210ENST00000560177 ADRA2BP18089 450 aa14.06□□□□□ -0.16
NUSAP1-210ENST00000560177 TTBK1Q5TCY1 1321 aaPredicted RBP14.03□□□□□ -0.16
NUSAP1-210ENST00000560177 PLPPR3Q6T4P5 718 aa14□□□□□ -0.17
NUSAP1-210ENST00000560177 SLC24A1O60721 1099 aa13.99□□□□□ -0.17
NUSAP1-210ENST00000560177 NACADO15069 1562 aa13.89□□□□□ -0.19
NUSAP1-210ENST00000560177 ZCCHC6Q5VYS8 1495 aaKnown RBP13.88□□□□□ -0.19
NUSAP1-210ENST00000560177 RB1CC1Q8TDY2 1594 aa13.87□□□□□ -0.19
NUSAP1-210ENST00000560177 MYO15BQ96JP2 1530 aa13.87□□□□□ -0.19
NUSAP1-210ENST00000560177 DCAF8L2P0C7V8 631 aa13.84□□□□□ -0.19
NUSAP1-210ENST00000560177 DCAF1Q9Y4B6 1507 aa13.81□□□□□ -0.2
NUSAP1-210ENST00000560177 HRCP23327 699 aa13.74□□□□□ -0.21
NUSAP1-210ENST00000560177 UNC13AQ9UPW8 1703 aa13.46□□□□□ -0.26
NUSAP1-210ENST00000560177 PABPN1Q86U42 306 aaKnown RBP eCLIP13.44□□□□□ -0.26
NUSAP1-210ENST00000560177 SCRIBQ14160 1630 aa13.43□□□□□ -0.26
NUSAP1-210ENST00000560177 PRKCSHP14314 528 aaPredicted RBP13.42□□□□□ -0.26
NUSAP1-210ENST00000560177 BICRAQ9NZM4 1560 aa13.42□□□□□ -0.26
NUSAP1-210ENST00000560177 SCAF1Q9H7N4 1312 aaKnown RBP13.39□□□□□ -0.27
NUSAP1-210ENST00000560177 SHROOM4Q9ULL8 1493 aa13.38□□□□□ -0.27
NUSAP1-210ENST00000560177 ERICH6Q7L0X2 663 aa13.27□□□□□ -0.29
NUSAP1-210ENST00000560177 APLP2Q06481 763 aa13.24□□□□□ -0.29
NUSAP1-210ENST00000560177 BCL11AQ9H165 835 aa13.19□□□□□ -0.3
NUSAP1-210ENST00000560177 PPARGC1BQ86YN6 1023 aaKnown RBP13.14□□□□□ -0.31
NUSAP1-210ENST00000560177 DNAJC5BQ9UF47 199 aa13.13□□□□□ -0.31
NUSAP1-210ENST00000560177 EIF4G1Q04637 1599 aaKnown RBP13.08□□□□□ -0.32
NUSAP1-210ENST00000560177 MAPK8IP2Q13387 824 aaPredicted RBP13.05□□□□□ -0.32
NUSAP1-210ENST00000560177 FAM9AQ8IZU1 332 aaPredicted RBP13.01□□□□□ -0.33
NUSAP1-210ENST00000560177 CC2D2AQ9P2K1 1620 aa12.99□□□□□ -0.33
NUSAP1-210ENST00000560177 CENPBP07199 599 aaPredicted RBP12.93□□□□□ -0.34
NUSAP1-210ENST00000560177 CECR2Q9BXF3 1484 aa12.93□□□□□ -0.34
NUSAP1-210ENST00000560177 DMRT2Q9Y5R5 561 aa12.92□□□□□ -0.34
NUSAP1-210ENST00000560177 BAZ1AQ9NRL2 1556 aaPredicted RBP12.9□□□□□ -0.34
NUSAP1-210ENST00000560177 DAXXQ9UER7 740 aaPredicted RBP12.9□□□□□ -0.34
NUSAP1-210ENST00000560177 SMARCA4P51532 1647 aa12.88□□□□□ -0.35
NUSAP1-210ENST00000560177 ACIN1Q9UKV3 1341 aaKnown RBP12.87□□□□□ -0.35
NUSAP1-210ENST00000560177 NCAPD3P42695 1498 aa12.83□□□□□ -0.35
NUSAP1-210ENST00000560177 ATAD2BQ9ULI0 1458 aa12.82□□□□□ -0.36
NUSAP1-210ENST00000560177 SMARCA2P51531 1590 aa12.82□□□□□ -0.36
NUSAP1-210ENST00000560177 MROH2BQ7Z745 1585 aa12.8□□□□□ -0.36
NUSAP1-210ENST00000560177 PCGF6Q9BYE7 350 aa12.79□□□□□ -0.36
NUSAP1-210ENST00000560177 PEG3Q9GZU2 1588 aa12.79□□□□□ -0.36
NUSAP1-210ENST00000560177 HMGXB3Q12766 1538 aa12.76□□□□□ -0.37
NUSAP1-210ENST00000560177 ZEB1P37275 1124 aaPredicted RBP12.73□□□□□ -0.37
NUSAP1-210ENST00000560177 CACNB1Q02641 598 aaPredicted RBP12.72□□□□□ -0.37
NUSAP1-210ENST00000560177 BAZ1BQ9UIG0 1483 aaKnown RBP12.72□□□□□ -0.37
NUSAP1-210ENST00000560177 RSF1Q96T23 1441 aaPredicted RBP12.71□□□□□ -0.38
NUSAP1-210ENST00000560177 GTF3C3Q9Y5Q9 886 aa12.69□□□□□ -0.38
NUSAP1-210ENST00000560177 NEUROD1Q13562 356 aa12.68□□□□□ -0.38
NUSAP1-210ENST00000560177 ANP32EQ9BTT0 268 aa12.66□□□□□ -0.38
NUSAP1-210ENST00000560177 WIZO95785 1651 aa12.63□□□□□ -0.39
NUSAP1-210ENST00000560177 EHMT2Q96KQ7 1210 aa12.57□□□□□ -0.4
NUSAP1-210ENST00000560177 TOP2AP11388 1531 aaKnown RBP12.56□□□□□ -0.4
NUSAP1-210ENST00000560177 DCAF8L1A6NGE4 600 aa12.53□□□□□ -0.4
NUSAP1-210ENST00000560177 LAMC3Q9Y6N6 1575 aa12.46□□□□□ -0.42
NUSAP1-210ENST00000560177 CADPSQ9ULU8 1353 aa12.46□□□□□ -0.42
NUSAP1-210ENST00000560177 CSRNP3Q8WYN3 585 aa12.44□□□□□ -0.42
NUSAP1-210ENST00000560177 NESP48681 1621 aa12.44□□□□□ -0.42
NUSAP1-210ENST00000560177 CCDC88BA6NC98 1476 aa12.4□□□□□ -0.42
NUSAP1-210ENST00000560177 ERCC6Q03468 1493 aa12.4□□□□□ -0.42
NUSAP1-210ENST00000560177 PDS5BQ9NTI5 1447 aa12.4□□□□□ -0.42
NUSAP1-210ENST00000560177 CFTRP13569 1480 aa12.39□□□□□ -0.43
NUSAP1-210ENST00000560177 SUPT5HO00267 1087 aaKnown RBP12.38□□□□□ -0.43
NUSAP1-210ENST00000560177 NCBP3Q53F19 620 aaKnown RBP12.37□□□□□ -0.43
NUSAP1-210ENST00000560177 TRIM26Q12899 539 aaPredicted RBP12.36□□□□□ -0.43
NUSAP1-210ENST00000560177 EIF5BO60841 1220 aaKnown RBP12.35□□□□□ -0.43
NUSAP1-210ENST00000560177 RNF39Q9H2S5 420 aa12.34□□□□□ -0.43
NUSAP1-210ENST00000560177 RTN4Q9NQC3 1192 aaKnown RBP12.34□□□□□ -0.43
NUSAP1-210ENST00000560177 UBE2Q2Q8WVN8 375 aa12.33□□□□□ -0.44
NUSAP1-210ENST00000560177 FANCD2Q9BXW9 1451 aa12.29□□□□□ -0.44
NUSAP1-210ENST00000560177 CUX2O14529 1486 aa12.28□□□□□ -0.44
NUSAP1-210ENST00000560177 CEP164Q9UPV0 1460 aa12.27□□□□□ -0.44
NUSAP1-210ENST00000560177 HOXD11P31277 338 aaPredicted RBP12.26□□□□□ -0.45
NUSAP1-210ENST00000560177 PPP4R3CPQ6ZMV5 832 aa12.26□□□□□ -0.45
NUSAP1-210ENST00000560177 KIF21AQ7Z4S6 1674 aa12.25□□□□□ -0.45
NUSAP1-210ENST00000560177 MRC2Q9UBG0 1479 aa12.25□□□□□ -0.45
NUSAP1-210ENST00000560177 THOC2Q8NI27 1593 aaKnown RBP12.25□□□□□ -0.45
NUSAP1-210ENST00000560177 PRDM2Q13029 1718 aa12.21□□□□□ -0.45
NUSAP1-210ENST00000560177 WDR62O43379 1518 aa12.2□□□□□ -0.46
NUSAP1-210ENST00000560177 CLSPNQ9HAW4 1339 aa12.19□□□□□ -0.46
NUSAP1-210ENST00000560177 ANO8Q9HCE9 1232 aaPredicted RBP12.18□□□□□ -0.46
NUSAP1-210ENST00000560177 URB2Q14146 1524 aaKnown RBP12.15□□□□□ -0.47
NUSAP1-210ENST00000560177 TSHZ2Q9NRE2 1034 aa12.14□□□□□ -0.47
NUSAP1-210ENST00000560177 ABCC8Q09428 1581 aa12.14□□□□□ -0.47
NUSAP1-210ENST00000560177 TOPBP1Q92547 1522 aa12.09□□□□□ -0.47
NUSAP1-210ENST00000560177 DIEXFQ68CQ4 756 aaKnown RBP12.09□□□□□ -0.47
NUSAP1-210ENST00000560177 DNMBPQ6XZF7 1577 aa12.08□□□□□ -0.47
NUSAP1-210ENST00000560177 C1QBPQ07021 282 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms