RNA–Protein interactions for RNA: ENST00000413636.6

CIRBP-202, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-202ENST00000413636 NISCHQ9Y2I1 1504 aa43.69■■■■■ 4.58
CIRBP-202ENST00000413636 CCDC180Q9P1Z9 1646 aa38.54■■■■□ 3.76
CIRBP-202ENST00000413636 ABCC9O60706 1549 aa37.15■■■■□ 3.54
CIRBP-202ENST00000413636 ZCCHC6Q5VYS8 1495 aaKnown RBP36.53■■■■□ 3.44
CIRBP-202ENST00000413636 DCAF8L2P0C7V8 631 aa36.3■■■■□ 3.4
CIRBP-202ENST00000413636 DCAF1Q9Y4B6 1507 aa36.14■■■■□ 3.38
CIRBP-202ENST00000413636 NACADO15069 1562 aa36.07■■■■□ 3.36
CIRBP-202ENST00000413636 MYO15BQ96JP2 1530 aa36.03■■■■□ 3.36
CIRBP-202ENST00000413636 RB1CC1Q8TDY2 1594 aa35.97■■■■□ 3.35
CIRBP-202ENST00000413636 SCRIBQ14160 1630 aa35.28■■■■□ 3.24
CIRBP-202ENST00000413636 UNC13AQ9UPW8 1703 aa35.23■■■■□ 3.23
CIRBP-202ENST00000413636 SHROOM4Q9ULL8 1493 aa35■■■■□ 3.19
CIRBP-202ENST00000413636 BICRAQ9NZM4 1560 aa34.88■■■■□ 3.17
CIRBP-202ENST00000413636 PABPN1Q86U42 306 aaKnown RBP eCLIP34.83■■■■□ 3.17
CIRBP-202ENST00000413636 CECR2Q9BXF3 1484 aa34■■■■□ 3.03
CIRBP-202ENST00000413636 EIF4G1Q04637 1599 aaKnown RBP33.9■■■■□ 3.02
CIRBP-202ENST00000413636 BAZ1AQ9NRL2 1556 aaPredicted RBP33.82■■■■□ 3
CIRBP-202ENST00000413636 SMARCA4P51532 1647 aa33.77■■■■□ 3
CIRBP-202ENST00000413636 MROH2BQ7Z745 1585 aa33.71■■■□□ 2.99
CIRBP-202ENST00000413636 CC2D2AQ9P2K1 1620 aa33.62■■■□□ 2.97
CIRBP-202ENST00000413636 RSF1Q96T23 1441 aaPredicted RBP33.54■■■□□ 2.96
CIRBP-202ENST00000413636 DNAJC5BQ9UF47 199 aa33.5■■■□□ 2.95
CIRBP-202ENST00000413636 ATAD2BQ9ULI0 1458 aa33.42■■■□□ 2.94
CIRBP-202ENST00000413636 WIZO95785 1651 aa33.4■■■□□ 2.94
CIRBP-202ENST00000413636 PEG3Q9GZU2 1588 aa33.4■■■□□ 2.94
CIRBP-202ENST00000413636 SMARCA2P51531 1590 aa33.4■■■□□ 2.94
CIRBP-202ENST00000413636 NCAPD3P42695 1498 aa33.27■■■□□ 2.92
CIRBP-202ENST00000413636 SUPT5HO00267 1087 aaKnown RBP33.24■■■□□ 2.91
CIRBP-202ENST00000413636 BAZ1BQ9UIG0 1483 aaKnown RBP33.19■■■□□ 2.9
CIRBP-202ENST00000413636 HMGXB3Q12766 1538 aa33.18■■■□□ 2.9
CIRBP-202ENST00000413636 TOP2AP11388 1531 aaKnown RBP33.05■■■□□ 2.88
CIRBP-202ENST00000413636 CCDC88BA6NC98 1476 aa32.66■■■□□ 2.82
CIRBP-202ENST00000413636 CADPSQ9ULU8 1353 aa32.35■■■□□ 2.77
CIRBP-202ENST00000413636 NESP48681 1621 aa32.34■■■□□ 2.77
CIRBP-202ENST00000413636 LAMC3Q9Y6N6 1575 aa32.3■■■□□ 2.76
CIRBP-202ENST00000413636 CFTRP13569 1480 aa32.3■■■□□ 2.76
CIRBP-202ENST00000413636 PRDM2Q13029 1718 aa32.15■■■□□ 2.74
CIRBP-202ENST00000413636 PDS5BQ9NTI5 1447 aa32.05■■■□□ 2.72
CIRBP-202ENST00000413636 FANCD2Q9BXW9 1451 aa32■■■□□ 2.71
CIRBP-202ENST00000413636 KIF21AQ7Z4S6 1674 aa31.98■■■□□ 2.71
CIRBP-202ENST00000413636 ERCC6Q03468 1493 aa31.94■■■□□ 2.7
CIRBP-202ENST00000413636 CEP164Q9UPV0 1460 aa31.9■■■□□ 2.7
CIRBP-202ENST00000413636 ABCC8Q09428 1581 aa31.71■■■□□ 2.67
CIRBP-202ENST00000413636 MRC2Q9UBG0 1479 aa31.71■■■□□ 2.67
CIRBP-202ENST00000413636 THOC2Q8NI27 1593 aaKnown RBP31.69■■■□□ 2.66
CIRBP-202ENST00000413636 URB2Q14146 1524 aaKnown RBP31.65■■■□□ 2.66
CIRBP-202ENST00000413636 WRNQ14191 1432 aaPredicted RBP eCLIP31.61■■■□□ 2.651e-6■■■■■ 58.5
CIRBP-202ENST00000413636 DNMBPQ6XZF7 1577 aa31.58■■■□□ 2.65
CIRBP-202ENST00000413636 WDR62O43379 1518 aa31.58■■■□□ 2.65
CIRBP-202ENST00000413636 CUX1P39880 1505 aa31.58■■■□□ 2.65
CIRBP-202ENST00000413636 TOPBP1Q92547 1522 aa31.57■■■□□ 2.64
CIRBP-202ENST00000413636 SYNJ1O43426 1573 aa31.52■■■□□ 2.64
CIRBP-202ENST00000413636 TOP2BQ02880 1626 aa31.47■■■□□ 2.63
CIRBP-202ENST00000413636 BIVM-ERCC5R4GMW8 1640 aa31.46■■■□□ 2.63
CIRBP-202ENST00000413636 CHIC1Q5VXU3 224 aa31.38■■■□□ 2.61
CIRBP-202ENST00000413636 FGD5Q6ZNL6 1462 aa31.37■■■□□ 2.61
CIRBP-202ENST00000413636 POLA1P09884 1462 aaPredicted RBP31.34■■■□□ 2.61
CIRBP-202ENST00000413636 TRIM41Q8WV44 630 aa31.33■■■□□ 2.61
CIRBP-202ENST00000413636 CUX2O14529 1486 aa31.33■■■□□ 2.61
CIRBP-202ENST00000413636 SOGA1O94964 1423 aa31.23■■■□□ 2.59
CIRBP-202ENST00000413636 RAD54L2Q9Y4B4 1467 aa31.22■■■□□ 2.59
CIRBP-202ENST00000413636 IFT140Q96RY7 1462 aa31.18■■■□□ 2.58
CIRBP-202ENST00000413636 TARBP1Q13395 1621 aaKnown RBP31.18■■■□□ 2.58
CIRBP-202ENST00000413636 WDR97A6NE52 1622 aa31.08■■■□□ 2.57
CIRBP-202ENST00000413636 ABCA10Q8WWZ4 1543 aa31.07■■■□□ 2.57
CIRBP-202ENST00000413636 ZNF608Q9ULD9 1512 aaPredicted RBP31.03■■■□□ 2.56
CIRBP-202ENST00000413636 TDRD9Q8NDG6 1382 aaKnown RBP30.99■■■□□ 2.55
CIRBP-202ENST00000413636 AQRO60306 1485 aaKnown RBP eCLIP30.93■■■□□ 2.543e-10■■■■■ 35.8
CIRBP-202ENST00000413636 EIF4G3O43432 1585 aaKnown RBP30.93■■■□□ 2.54
CIRBP-202ENST00000413636 ABCA5Q8WWZ7 1642 aa30.91■■■□□ 2.54
CIRBP-202ENST00000413636 KIF27Q86VH2 1401 aa30.88■■■□□ 2.53
CIRBP-202ENST00000413636 GAPVD1Q14C86 1478 aa30.87■■■□□ 2.53
CIRBP-202ENST00000413636 RUSC2Q8N2Y8 1516 aa30.86■■■□□ 2.53
CIRBP-202ENST00000413636 PBRM1Q86U86 1689 aa30.8■■■□□ 2.52
CIRBP-202ENST00000413636 GRIN2BQ13224 1484 aa30.77■■■□□ 2.52
CIRBP-202ENST00000413636 FAM9AQ8IZU1 332 aaPredicted RBP30.72■■■□□ 2.51
CIRBP-202ENST00000413636 ERICH3Q5RHP9 1530 aa30.71■■■□□ 2.51
CIRBP-202ENST00000413636 EEA1Q15075 1411 aa30.71■■■□□ 2.51
CIRBP-202ENST00000413636 IGF1RP08069 1367 aa30.69■■■□□ 2.5
CIRBP-202ENST00000413636 SNAPC4Q5SXM2 1469 aa30.66■■■□□ 2.5
CIRBP-202ENST00000413636 MAGI1Q96QZ7 1491 aaPredicted RBP30.61■■■□□ 2.49
CIRBP-202ENST00000413636 CSRNP3Q8WYN3 585 aa30.61■■■□□ 2.49
CIRBP-202ENST00000413636 CUL7Q14999 1698 aa30.57■■■□□ 2.48
CIRBP-202ENST00000413636 ADAMTS12P58397 1594 aa30.57■■■□□ 2.48
CIRBP-202ENST00000413636 FHAD1B1AJZ9 1412 aa30.52■■■□□ 2.48
CIRBP-202ENST00000413636 CARMIL1Q5VZK9 1371 aa30.52■■■□□ 2.48
CIRBP-202ENST00000413636 SYNJ2O15056 1496 aa30.49■■■□□ 2.47
CIRBP-202ENST00000413636 PRXQ9BXM0 1461 aa30.46■■■□□ 2.47
CIRBP-202ENST00000413636 FBLN2P98095 1184 aa30.46■■■□□ 2.47
CIRBP-202ENST00000413636 CHMP7Q8WUX9 453 aaPredicted RBP30.44■■■□□ 2.46
CIRBP-202ENST00000413636 CHD1O14646 1710 aa30.44■■■□□ 2.46
CIRBP-202ENST00000413636 RAPGEF2Q9Y4G8 1499 aa30.41■■■□□ 2.46
CIRBP-202ENST00000413636 GRIN2AQ12879 1464 aa30.38■■■□□ 2.45
CIRBP-202ENST00000413636 KIF21BO75037 1637 aa30.37■■■□□ 2.45
CIRBP-202ENST00000413636 EHMT2Q96KQ7 1210 aa30.3■■■□□ 2.44
CIRBP-202ENST00000413636 GOLGA3Q08378 1498 aa30.25■■■□□ 2.43
CIRBP-202ENST00000413636 CEP170Q5SW79 1584 aa30.23■■■□□ 2.43
CIRBP-202ENST00000413636 NUP160Q12769 1436 aa30.2■■■□□ 2.43
CIRBP-202ENST00000413636 OSCARQ8IYS5 282 aa30.17■■■□□ 2.42
CIRBP-202ENST00000413636 UBTFP17480 764 aaKnown RBP30.14■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms