RNA–Protein interactions for RNA: ENST00000591935.5

CIRBP-235, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene CIRBP, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-235ENST00000591935 NISCHQ9Y2I1 1504 aa43.02■■■■■ 4.48
CIRBP-235ENST00000591935 CCDC180Q9P1Z9 1646 aa38.43■■■■□ 3.74
CIRBP-235ENST00000591935 ABCC9O60706 1549 aa38.2■■■■□ 3.71
CIRBP-235ENST00000591935 RB1CC1Q8TDY2 1594 aa36.43■■■■□ 3.42
CIRBP-235ENST00000591935 NACADO15069 1562 aa36.26■■■■□ 3.39
CIRBP-235ENST00000591935 DCAF8L2P0C7V8 631 aa36.24■■■■□ 3.39
CIRBP-235ENST00000591935 MYO15BQ96JP2 1530 aa35.87■■■■□ 3.33
CIRBP-235ENST00000591935 UNC13AQ9UPW8 1703 aa35.73■■■■□ 3.31
CIRBP-235ENST00000591935 ZCCHC6Q5VYS8 1495 aaKnown RBP35.69■■■■□ 3.3
CIRBP-235ENST00000591935 PABPN1Q86U42 306 aaKnown RBP eCLIP35.65■■■■□ 3.31e-14■■□□□ 12.8
CIRBP-235ENST00000591935 DNAJC5BQ9UF47 199 aa35.64■■■■□ 3.3
CIRBP-235ENST00000591935 DCAF1Q9Y4B6 1507 aa35.5■■■■□ 3.27
CIRBP-235ENST00000591935 BICRAQ9NZM4 1560 aa35.43■■■■□ 3.26
CIRBP-235ENST00000591935 SCRIBQ14160 1630 aa35.09■■■■□ 3.21
CIRBP-235ENST00000591935 SHROOM4Q9ULL8 1493 aa34.96■■■■□ 3.19
CIRBP-235ENST00000591935 CC2D2AQ9P2K1 1620 aa34.52■■■■□ 3.12
CIRBP-235ENST00000591935 EIF4G1Q04637 1599 aaKnown RBP34.49■■■■□ 3.11
CIRBP-235ENST00000591935 CECR2Q9BXF3 1484 aa34.33■■■■□ 3.09
CIRBP-235ENST00000591935 SMARCA4P51532 1647 aa33.5■■■□□ 2.95
CIRBP-235ENST00000591935 NCAPD3P42695 1498 aa33.49■■■□□ 2.95
CIRBP-235ENST00000591935 ATAD2BQ9ULI0 1458 aa33.44■■■□□ 2.94
CIRBP-235ENST00000591935 BAZ1AQ9NRL2 1556 aaPredicted RBP33.34■■■□□ 2.93
CIRBP-235ENST00000591935 SMARCA2P51531 1590 aa33.32■■■□□ 2.92
CIRBP-235ENST00000591935 HMGXB3Q12766 1538 aa33.23■■■□□ 2.91
CIRBP-235ENST00000591935 MROH2BQ7Z745 1585 aa33.19■■■□□ 2.9
CIRBP-235ENST00000591935 PEG3Q9GZU2 1588 aa33.13■■■□□ 2.89
CIRBP-235ENST00000591935 BAZ1BQ9UIG0 1483 aaKnown RBP33.11■■■□□ 2.89
CIRBP-235ENST00000591935 NESP48681 1621 aa32.93■■■□□ 2.86
CIRBP-235ENST00000591935 ERCC6Q03468 1493 aa32.91■■■□□ 2.86
CIRBP-235ENST00000591935 WIZO95785 1651 aa32.82■■■□□ 2.84
CIRBP-235ENST00000591935 CUX2O14529 1486 aa32.77■■■□□ 2.84
CIRBP-235ENST00000591935 LAMC3Q9Y6N6 1575 aa32.67■■■□□ 2.82
CIRBP-235ENST00000591935 RSF1Q96T23 1441 aaPredicted RBP32.6■■■□□ 2.81
CIRBP-235ENST00000591935 KIF21AQ7Z4S6 1674 aa32.51■■■□□ 2.79
CIRBP-235ENST00000591935 PDS5BQ9NTI5 1447 aa32.49■■■□□ 2.79
CIRBP-235ENST00000591935 CADPSQ9ULU8 1353 aa32.48■■■□□ 2.79
CIRBP-235ENST00000591935 THOC2Q8NI27 1593 aaKnown RBP32.48■■■□□ 2.79
CIRBP-235ENST00000591935 DNAJC5Q9H3Z4 198 aa32.43■■■□□ 2.78
CIRBP-235ENST00000591935 TOP2AP11388 1531 aaKnown RBP32.36■■■□□ 2.77
CIRBP-235ENST00000591935 CFTRP13569 1480 aa32.17■■■□□ 2.74
CIRBP-235ENST00000591935 MRC2Q9UBG0 1479 aa32.16■■■□□ 2.74
CIRBP-235ENST00000591935 FANCD2Q9BXW9 1451 aa32.12■■■□□ 2.73
CIRBP-235ENST00000591935 CEP164Q9UPV0 1460 aa32.1■■■□□ 2.73
CIRBP-235ENST00000591935 WDR62O43379 1518 aa32.08■■■□□ 2.73
CIRBP-235ENST00000591935 CCDC88BA6NC98 1476 aa32.03■■■□□ 2.72
CIRBP-235ENST00000591935 PRDM2Q13029 1718 aa31.92■■■□□ 2.7
CIRBP-235ENST00000591935 URB2Q14146 1524 aaKnown RBP31.86■■■□□ 2.69
CIRBP-235ENST00000591935 TOPBP1Q92547 1522 aa31.56■■■□□ 2.64
CIRBP-235ENST00000591935 ABCC8Q09428 1581 aa31.51■■■□□ 2.64
CIRBP-235ENST00000591935 DNMBPQ6XZF7 1577 aa31.45■■■□□ 2.63
CIRBP-235ENST00000591935 IFT140Q96RY7 1462 aa31.45■■■□□ 2.62
CIRBP-235ENST00000591935 ZNF608Q9ULD9 1512 aaPredicted RBP31.44■■■□□ 2.62
CIRBP-235ENST00000591935 SUPT5HO00267 1087 aaKnown RBP31.43■■■□□ 2.62
CIRBP-235ENST00000591935 OSCARQ8IYS5 282 aa31.34■■■□□ 2.61
CIRBP-235ENST00000591935 TARBP1Q13395 1621 aaKnown RBP31.27■■■□□ 2.6
CIRBP-235ENST00000591935 POLA1P09884 1462 aaPredicted RBP31.25■■■□□ 2.59
CIRBP-235ENST00000591935 EIF4G3O43432 1585 aaKnown RBP31.24■■■□□ 2.59
CIRBP-235ENST00000591935 AQRO60306 1485 aaKnown RBP eCLIP31.19■■■□□ 2.582e-10■■■■■ 32.8
CIRBP-235ENST00000591935 RAD54L2Q9Y4B4 1467 aa31.17■■■□□ 2.58
CIRBP-235ENST00000591935 CUX1P39880 1505 aa31.14■■■□□ 2.58
CIRBP-235ENST00000591935 TRIM41Q8WV44 630 aa31.14■■■□□ 2.58
CIRBP-235ENST00000591935 SOGA1O94964 1423 aa31.13■■■□□ 2.57
CIRBP-235ENST00000591935 FGD5Q6ZNL6 1462 aa31.11■■■□□ 2.57
CIRBP-235ENST00000591935 TDRD9Q8NDG6 1382 aaKnown RBP31.05■■■□□ 2.56
CIRBP-235ENST00000591935 CHD1O14646 1710 aa31■■■□□ 2.55
CIRBP-235ENST00000591935 WDR97A6NE52 1622 aa30.95■■■□□ 2.55
CIRBP-235ENST00000591935 FBLN2P98095 1184 aa30.92■■■□□ 2.54
CIRBP-235ENST00000591935 RIMBP3CA6NJZ7 1639 aa30.91■■■□□ 2.54
CIRBP-235ENST00000591935 RIMBP3BA6NNM3 1639 aa30.91■■■□□ 2.54
CIRBP-235ENST00000591935 RIMBP3Q9UFD9 1639 aa30.91■■■□□ 2.54
CIRBP-235ENST00000591935 SNAPC4Q5SXM2 1469 aa30.84■■■□□ 2.53
CIRBP-235ENST00000591935 ARHGEF11O15085 1522 aa30.81■■■□□ 2.52
CIRBP-235ENST00000591935 GRIN2BQ13224 1484 aa30.79■■■□□ 2.52
CIRBP-235ENST00000591935 ABCA10Q8WWZ4 1543 aa30.75■■■□□ 2.51
CIRBP-235ENST00000591935 MAGI1Q96QZ7 1491 aaPredicted RBP30.75■■■□□ 2.51
CIRBP-235ENST00000591935 GAPVD1Q14C86 1478 aa30.74■■■□□ 2.51
CIRBP-235ENST00000591935 PBRM1Q86U86 1689 aa30.74■■■□□ 2.51
CIRBP-235ENST00000591935 CHMP7Q8WUX9 453 aaPredicted RBP30.72■■■□□ 2.51
CIRBP-235ENST00000591935 BIVM-ERCC5R4GMW8 1640 aa30.72■■■□□ 2.51
CIRBP-235ENST00000591935 SYNJ1O43426 1573 aa30.71■■■□□ 2.51
CIRBP-235ENST00000591935 TOP2BQ02880 1626 aa30.71■■■□□ 2.51
CIRBP-235ENST00000591935 WRNQ14191 1432 aaPredicted RBP eCLIP30.71■■■□□ 2.511e-6■■■■■ 58.5
CIRBP-235ENST00000591935 ABCA5Q8WWZ7 1642 aa30.69■■■□□ 2.5
CIRBP-235ENST00000591935 SYNJ2O15056 1496 aa30.65■■■□□ 2.5
CIRBP-235ENST00000591935 CYB5RLQ6IPT4 315 aa30.61■■■□□ 2.49
CIRBP-235ENST00000591935 CLASP1Q7Z460 1538 aa30.6■■■□□ 2.49
CIRBP-235ENST00000591935 ARAP1Q96P48 1450 aa30.54■■■□□ 2.48
CIRBP-235ENST00000591935 ADAMTS12P58397 1594 aa30.42■■■□□ 2.46
CIRBP-235ENST00000591935 GRIN2AQ12879 1464 aa30.4■■■□□ 2.46
CIRBP-235ENST00000591935 ERICH3Q5RHP9 1530 aa30.36■■■□□ 2.45
CIRBP-235ENST00000591935 FHAD1B1AJZ9 1412 aa30.35■■■□□ 2.45
CIRBP-235ENST00000591935 CEP170Q5SW79 1584 aa30.31■■■□□ 2.44
CIRBP-235ENST00000591935 NUP160Q12769 1436 aa30.29■■■□□ 2.44
CIRBP-235ENST00000591935 ERCC6L2Q5T890 1561 aa30.22■■■□□ 2.43
CIRBP-235ENST00000591935 TRHP20396 242 aaPredicted RBP30.15■■■□□ 2.42
CIRBP-235ENST00000591935 SHROOM2Q13796 1616 aa30.13■■■□□ 2.41
CIRBP-235ENST00000591935 IGF1RP08069 1367 aa30.1■■■□□ 2.41
CIRBP-235ENST00000591935 KIF27Q86VH2 1401 aa30.09■■■□□ 2.41
CIRBP-235ENST00000591935 JPH4Q96JJ6 628 aa30.03■■■□□ 2.4
CIRBP-235ENST00000591935 RUSC2Q8N2Y8 1516 aa29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms