RNA–Protein interactions for RNA: ENST00000523016.1

COX6C-209, Transcript of cytochrome c oxidase subunit 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COX6C, Length 745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6C-209ENST00000523016 AEBP2Q6ZN18 517 aaPredicted RBP21.21■□□□□ 0.99
COX6C-209ENST00000523016 CHIC1Q5VXU3 224 aa21.04■□□□□ 0.96
COX6C-209ENST00000523016 PHF23Q9BUL5 403 aaPredicted RBP18.5■□□□□ 0.55
COX6C-209ENST00000523016 SENP3Q9H4L4 574 aaPredicted RBP18.04■□□□□ 0.48
COX6C-209ENST00000523016 PLPPR3Q6T4P5 718 aa17.22■□□□□ 0.35
COX6C-209ENST00000523016 FOXD1Q16676 465 aa16.65■□□□□ 0.26
COX6C-209ENST00000523016 PPP6R1Q9UPN7 881 aa16.21■□□□□ 0.19
COX6C-209ENST00000523016 ADRA2BP18089 450 aa16.2■□□□□ 0.18
COX6C-209ENST00000523016 PIAS4Q8N2W9 510 aaPredicted RBP15.75■□□□□ 0.11
COX6C-209ENST00000523016 MSH5O43196 834 aa15.31■□□□□ 0.04
COX6C-209ENST00000523016 PPP4R3CPQ6ZMV5 832 aa15.17■□□□□ 0.02
COX6C-209ENST00000523016 KCNA4P22459 653 aa15.1■□□□□ 0.01
COX6C-209ENST00000523016 SCAF1Q9H7N4 1312 aaKnown RBP14.93□□□□□ -0.02
COX6C-209ENST00000523016 NCBP3Q53F19 620 aaKnown RBP14.91□□□□□ -0.02
COX6C-209ENST00000523016 CNKSR2Q8WXI2 1034 aa14.73□□□□□ -0.05
COX6C-209ENST00000523016 NPM3O75607 178 aaKnown RBP14.63□□□□□ -0.07
COX6C-209ENST00000523016 MAPK8IP2Q13387 824 aaPredicted RBP14.6□□□□□ -0.07
COX6C-209ENST00000523016 SLC4A1APQ9BWU0 796 aaKnown RBP14.45□□□□□ -0.1
COX6C-209ENST00000523016 DMRT2Q9Y5R5 561 aa14.44□□□□□ -0.1
COX6C-209ENST00000523016 RNF216Q9NWF9 866 aaPredicted RBP14.39□□□□□ -0.11
COX6C-209ENST00000523016 DNAJC5BQ9UF47 199 aa14.34□□□□□ -0.11
COX6C-209ENST00000523016 HOXD11P31277 338 aaPredicted RBP14.27□□□□□ -0.13
COX6C-209ENST00000523016 EHMT2Q96KQ7 1210 aa14.26□□□□□ -0.13
COX6C-209ENST00000523016 CSRNP3Q8WYN3 585 aa14.05□□□□□ -0.16
COX6C-209ENST00000523016 NISCHQ9Y2I1 1504 aa14.02□□□□□ -0.16
COX6C-209ENST00000523016 ZBTB22O15209 634 aa13.89□□□□□ -0.19
COX6C-209ENST00000523016 FOXD4L1Q9NU39 408 aa13.86□□□□□ -0.19
COX6C-209ENST00000523016 SLC4A2P04920 1241 aa13.76□□□□□ -0.21
COX6C-209ENST00000523016 DCAF8L1A6NGE4 600 aa13.68□□□□□ -0.22
COX6C-209ENST00000523016 MYCNP04198 464 aaPredicted RBP13.55□□□□□ -0.24
COX6C-209ENST00000523016 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.53□□□□□ -0.24
COX6C-209ENST00000523016 ATXN8OSP0DMR3 200 aa13.44□□□□□ -0.26
COX6C-209ENST00000523016 POTEDQ86YR6 584 aa13.4□□□□□ -0.26
COX6C-209ENST00000523016 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.35□□□□□ -0.27
COX6C-209ENST00000523016 HNRNPUL2Q1KMD3 747 aaKnown RBP13.35□□□□□ -0.27
COX6C-209ENST00000523016 U3KPZ7 1027 aaPredicted RBP13.35□□□□□ -0.27
COX6C-209ENST00000523016 SAMD1Q6SPF0 538 aaPredicted RBP13.3□□□□□ -0.28
COX6C-209ENST00000523016 APLP2Q06481 763 aa13.16□□□□□ -0.3
COX6C-209ENST00000523016 RNF39Q9H2S5 420 aa13.13□□□□□ -0.31
COX6C-209ENST00000523016 ATF5Q9Y2D1 282 aaPredicted RBP13.09□□□□□ -0.31
COX6C-209ENST00000523016 C1QBPQ07021 282 aaKnown RBP13.02□□□□□ -0.33
COX6C-209ENST00000523016 ZNF219Q9P2Y4 722 aaPredicted RBP12.92□□□□□ -0.34
COX6C-209ENST00000523016 SPINK5Q9NQ38 1064 aaPredicted RBP12.85□□□□□ -0.35
COX6C-209ENST00000523016 CAPN15O75808 1086 aa12.8□□□□□ -0.36
COX6C-209ENST00000523016 TRHP20396 242 aaPredicted RBP12.78□□□□□ -0.36
COX6C-209ENST00000523016 POLA2Q14181 598 aa12.69□□□□□ -0.38
COX6C-209ENST00000523016 FKBP8Q14318 412 aa12.65□□□□□ -0.38
COX6C-209ENST00000523016 FBLN2P98095 1184 aa12.6□□□□□ -0.39
COX6C-209ENST00000523016 ZBTB12Q9Y330 459 aaPredicted RBP12.58□□□□□ -0.4
COX6C-209ENST00000523016 MKRN4PQ13434 485 aaPredicted RBP12.57□□□□□ -0.4
COX6C-209ENST00000523016 DSG3P32926 999 aa12.56□□□□□ -0.4
COX6C-209ENST00000523016 ABCB7O75027 752 aa12.54□□□□□ -0.4
COX6C-209ENST00000523016 CACNB1Q02641 598 aaPredicted RBP12.54□□□□□ -0.4
COX6C-209ENST00000523016 SPDYE4A6NLX3 237 aa12.43□□□□□ -0.42
COX6C-209ENST00000523016 PROM2Q8N271 834 aa12.34□□□□□ -0.43
COX6C-209ENST00000523016 SPDYE2BA6NHP3 402 aa12.24□□□□□ -0.45
COX6C-209ENST00000523016 SPDYE6P0CI01 402 aa12.24□□□□□ -0.45
COX6C-209ENST00000523016 SPDYE2Q495Y8 402 aa12.24□□□□□ -0.45
COX6C-209ENST00000523016 FBXO3Q9UK99 471 aa12.24□□□□□ -0.45
COX6C-209ENST00000523016 OSCARQ8IYS5 282 aa12.21□□□□□ -0.45
COX6C-209ENST00000523016 ZNF692Q9BU19 519 aaPredicted RBP12.18□□□□□ -0.46
COX6C-209ENST00000523016 SSUH2Q9Y2M2 353 aa12.16□□□□□ -0.46
COX6C-209ENST00000523016 AMER1Q5JTC6 1135 aaPredicted RBP12.09□□□□□ -0.47
COX6C-209ENST00000523016 CCDC180Q9P1Z9 1646 aa12.07□□□□□ -0.48
COX6C-209ENST00000523016 PABPN1Q86U42 306 aaKnown RBP eCLIP12.01□□□□□ -0.49
COX6C-209ENST00000523016 RBM42Q9BTD8 480 aaKnown RBP12.01□□□□□ -0.49
COX6C-209ENST00000523016 VASPP50552 380 aaPredicted RBP12□□□□□ -0.49
COX6C-209ENST00000523016 STAG3Q9UJ98 1225 aa11.98□□□□□ -0.49
COX6C-209ENST00000523016 RTN4Q9NQC3 1192 aaKnown RBP11.97□□□□□ -0.49
COX6C-209ENST00000523016 AKT1S1Q96B36 256 aa11.92□□□□□ -0.5
COX6C-209ENST00000523016 ZCCHC6Q5VYS8 1495 aaKnown RBP11.89□□□□□ -0.51
COX6C-209ENST00000523016 IFNLR1Q8IU57 520 aaPredicted RBP11.85□□□□□ -0.51
COX6C-209ENST00000523016 SPDYE1Q8NFV5 336 aaPredicted RBP11.8□□□□□ -0.52
COX6C-209ENST00000523016 REM2Q8IYK8 340 aaPredicted RBP11.76□□□□□ -0.53
COX6C-209ENST00000523016 MIER1Q8N108 512 aa11.75□□□□□ -0.53
COX6C-209ENST00000523016 PLCD3Q8N3E9 789 aa11.75□□□□□ -0.53
COX6C-209ENST00000523016 SHROOM4Q9ULL8 1493 aa11.74□□□□□ -0.53
COX6C-209ENST00000523016 PLEKHG5O94827 1062 aa11.71□□□□□ -0.53
COX6C-209ENST00000523016 KLHL34Q8N239 644 aa11.7□□□□□ -0.54
COX6C-209ENST00000523016 SPOCK2Q92563 424 aa11.69□□□□□ -0.54
COX6C-209ENST00000523016 ZBTB47Q9UFB7 747 aaPredicted RBP11.69□□□□□ -0.54
COX6C-209ENST00000523016 DCAF1Q9Y4B6 1507 aa11.65□□□□□ -0.54
COX6C-209ENST00000523016 CLEC11AQ9Y240 323 aa11.64□□□□□ -0.55
COX6C-209ENST00000523016 PRR29P0C7W0 189 aa11.63□□□□□ -0.55
COX6C-209ENST00000523016 PITPNM1O00562 1244 aa11.61□□□□□ -0.55
COX6C-209ENST00000523016 SUPT5HO00267 1087 aaKnown RBP11.58□□□□□ -0.56
COX6C-209ENST00000523016 PKD2Q13563 968 aa11.56□□□□□ -0.56
COX6C-209ENST00000523016 CREBZFQ9NS37 354 aa11.55□□□□□ -0.56
COX6C-209ENST00000523016 MNX1P50219 401 aaPredicted RBP11.48□□□□□ -0.57
COX6C-209ENST00000523016 NUBP1P53384 320 aa11.45□□□□□ -0.58
COX6C-209ENST00000523016 TRIM41Q8WV44 630 aa11.44□□□□□ -0.58
COX6C-209ENST00000523016 ECM2O94769 699 aaPredicted RBP11.43□□□□□ -0.58
COX6C-209ENST00000523016 GSE1Q14687 1217 aa11.41□□□□□ -0.58
COX6C-209ENST00000523016 NPM1P06748 294 aaKnown RBP eCLIP11.4□□□□□ -0.58
COX6C-209ENST00000523016 DCAF8L2P0C7V8 631 aa11.4□□□□□ -0.58
COX6C-209ENST00000523016 CIZ1Q9ULV3 898 aaPredicted RBP11.4□□□□□ -0.58
COX6C-209ENST00000523016 FXR2P51116 673 aaKnown RBP eCLIP11.38□□□□□ -0.59
COX6C-209ENST00000523016 CHRDL2Q6WN34 429 aa11.36□□□□□ -0.59
COX6C-209ENST00000523016 FAM212AQ96EL1 285 aa11.35□□□□□ -0.59
COX6C-209ENST00000523016 MYO15BQ96JP2 1530 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms