RNA–Protein interactions for RNA: ENST00000411769.1

CRKL-202, Transcript of CRK like proto-oncogene, adaptor protein, humanhuman

TSL 1 (best)

Gene CRKL, Length 2,037 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRKL-202ENST00000411769 NISCHQ9Y2I1 1504 aa43.44■■■■■ 4.54
CRKL-202ENST00000411769 CCDC180Q9P1Z9 1646 aa37.94■■■■□ 3.66
CRKL-202ENST00000411769 ABCC9O60706 1549 aa36.69■■■■□ 3.46
CRKL-202ENST00000411769 ZCCHC6Q5VYS8 1495 aaKnown RBP36.47■■■■□ 3.43
CRKL-202ENST00000411769 DCAF8L2P0C7V8 631 aa36■■■■□ 3.35
CRKL-202ENST00000411769 DCAF1Q9Y4B6 1507 aa35.84■■■■□ 3.33
CRKL-202ENST00000411769 NACADO15069 1562 aa35.48■■■■□ 3.27
CRKL-202ENST00000411769 SHROOM4Q9ULL8 1493 aa35.46■■■■□ 3.27
CRKL-202ENST00000411769 MYO15BQ96JP2 1530 aa35.45■■■■□ 3.27
CRKL-202ENST00000411769 RB1CC1Q8TDY2 1594 aa35.4■■■■□ 3.26
CRKL-202ENST00000411769 SCRIBQ14160 1630 aa34.97■■■■□ 3.19
CRKL-202ENST00000411769 UNC13AQ9UPW8 1703 aa34.74■■■■□ 3.15
CRKL-202ENST00000411769 PABPN1Q86U42 306 aaKnown RBP eCLIP34.43■■■■□ 3.1
CRKL-202ENST00000411769 BICRAQ9NZM4 1560 aa34.43■■■■□ 3.1
CRKL-202ENST00000411769 SUPT5HO00267 1087 aaKnown RBP34.01■■■■□ 3.04
CRKL-202ENST00000411769 CECR2Q9BXF3 1484 aa33.83■■■■□ 3.01
CRKL-202ENST00000411769 RSF1Q96T23 1441 aaPredicted RBP33.65■■■□□ 2.98
CRKL-202ENST00000411769 MROH2BQ7Z745 1585 aa33.6■■■□□ 2.97
CRKL-202ENST00000411769 BAZ1AQ9NRL2 1556 aaPredicted RBP33.54■■■□□ 2.96
CRKL-202ENST00000411769 SMARCA4P51532 1647 aa33.46■■■□□ 2.95
CRKL-202ENST00000411769 EIF4G1Q04637 1599 aaKnown RBP33.43■■■□□ 2.94
CRKL-202ENST00000411769 WIZO95785 1651 aa33.37■■■□□ 2.93
CRKL-202ENST00000411769 DNAJC5BQ9UF47 199 aa33.34■■■□□ 2.93
CRKL-202ENST00000411769 CC2D2AQ9P2K1 1620 aa33.19■■■□□ 2.9
CRKL-202ENST00000411769 PEG3Q9GZU2 1588 aa33■■■□□ 2.87
CRKL-202ENST00000411769 TOP2AP11388 1531 aaKnown RBP32.93■■■□□ 2.86
CRKL-202ENST00000411769 ATAD2BQ9ULI0 1458 aa32.91■■■□□ 2.86
CRKL-202ENST00000411769 SMARCA2P51531 1590 aa32.87■■■□□ 2.85
CRKL-202ENST00000411769 NCAPD3P42695 1498 aa32.78■■■□□ 2.84
CRKL-202ENST00000411769 BAZ1BQ9UIG0 1483 aaKnown RBP32.73■■■□□ 2.83
CRKL-202ENST00000411769 HMGXB3Q12766 1538 aa32.62■■■□□ 2.81
CRKL-202ENST00000411769 CCDC88BA6NC98 1476 aa32.61■■■□□ 2.81
CRKL-202ENST00000411769 CHIC1Q5VXU3 224 aa32.43■■■□□ 2.78
CRKL-202ENST00000411769 ABCC8Q09428 1581 aa31.96■■■□□ 2.71
CRKL-202ENST00000411769 NESP48681 1621 aa31.94■■■□□ 2.7
CRKL-202ENST00000411769 TRIM41Q8WV44 630 aa31.92■■■□□ 2.7
CRKL-202ENST00000411769 CFTRP13569 1480 aa31.87■■■□□ 2.69
CRKL-202ENST00000411769 CADPSQ9ULU8 1353 aa31.86■■■□□ 2.69
CRKL-202ENST00000411769 LAMC3Q9Y6N6 1575 aa31.8■■■□□ 2.68
CRKL-202ENST00000411769 PRDM2Q13029 1718 aa31.78■■■□□ 2.68
CRKL-202ENST00000411769 WRNQ14191 1432 aaPredicted RBP eCLIP31.68■■■□□ 2.664e-6■■■□□ 16.1
CRKL-202ENST00000411769 SYNJ1O43426 1573 aa31.62■■■□□ 2.65
CRKL-202ENST00000411769 PDS5BQ9NTI5 1447 aa31.56■■■□□ 2.64
CRKL-202ENST00000411769 KIF21AQ7Z4S6 1674 aa31.53■■■□□ 2.64
CRKL-202ENST00000411769 ERCC6Q03468 1493 aa31.51■■■□□ 2.63
CRKL-202ENST00000411769 FANCD2Q9BXW9 1451 aa31.5■■■□□ 2.63
CRKL-202ENST00000411769 TOP2BQ02880 1626 aa31.45■■■□□ 2.63
CRKL-202ENST00000411769 BIVM-ERCC5R4GMW8 1640 aa31.43■■■□□ 2.62
CRKL-202ENST00000411769 CUX1P39880 1505 aa31.43■■■□□ 2.62
CRKL-202ENST00000411769 FAM9AQ8IZU1 332 aaPredicted RBP31.42■■■□□ 2.62
CRKL-202ENST00000411769 CEP164Q9UPV0 1460 aa31.38■■■□□ 2.61
CRKL-202ENST00000411769 SOGA1O94964 1423 aa31.28■■■□□ 2.6
CRKL-202ENST00000411769 THOC2Q8NI27 1593 aaKnown RBP31.27■■■□□ 2.6
CRKL-202ENST00000411769 LOC105371045A0A1W2PR82 267 aa31.25■■■□□ 2.59
CRKL-202ENST00000411769 MRC2Q9UBG0 1479 aa31.22■■■□□ 2.59
CRKL-202ENST00000411769 RUSC2Q8N2Y8 1516 aa31.21■■■□□ 2.59
CRKL-202ENST00000411769 URB2Q14146 1524 aaKnown RBP31.19■■■□□ 2.58
CRKL-202ENST00000411769 DNMBPQ6XZF7 1577 aa31.15■■■□□ 2.58
CRKL-202ENST00000411769 WDR62O43379 1518 aa31.12■■■□□ 2.57
CRKL-202ENST00000411769 TOPBP1Q92547 1522 aa31.12■■■□□ 2.57
CRKL-202ENST00000411769 FGD5Q6ZNL6 1462 aa31.1■■■□□ 2.57
CRKL-202ENST00000411769 EEA1Q15075 1411 aa31.07■■■□□ 2.56
CRKL-202ENST00000411769 EHMT2Q96KQ7 1210 aa31.07■■■□□ 2.56
CRKL-202ENST00000411769 CSRNP3Q8WYN3 585 aa30.97■■■□□ 2.55
CRKL-202ENST00000411769 POLA1P09884 1462 aaPredicted RBP30.97■■■□□ 2.55
CRKL-202ENST00000411769 CUX2O14529 1486 aa30.95■■■□□ 2.54
CRKL-202ENST00000411769 RAD54L2Q9Y4B4 1467 aa30.9■■■□□ 2.54
CRKL-202ENST00000411769 KIF27Q86VH2 1401 aa30.86■■■□□ 2.53
CRKL-202ENST00000411769 ABCA10Q8WWZ4 1543 aa30.77■■■□□ 2.52
CRKL-202ENST00000411769 WDR97A6NE52 1622 aa30.76■■■□□ 2.52
CRKL-202ENST00000411769 KIF21BO75037 1637 aa30.76■■■□□ 2.51
CRKL-202ENST00000411769 GOLGA3Q08378 1498 aa30.71■■■□□ 2.51
CRKL-202ENST00000411769 TARBP1Q13395 1621 aaKnown RBP30.7■■■□□ 2.5
CRKL-202ENST00000411769 IFT140Q96RY7 1462 aa30.68■■■□□ 2.5
CRKL-202ENST00000411769 RAPGEF2Q9Y4G8 1499 aa30.65■■■□□ 2.5
CRKL-202ENST00000411769 HRCP23327 699 aa30.64■■■□□ 2.5
CRKL-202ENST00000411769 PRXQ9BXM0 1461 aa30.63■■■□□ 2.49
CRKL-202ENST00000411769 ZNF608Q9ULD9 1512 aaPredicted RBP30.62■■■□□ 2.49
CRKL-202ENST00000411769 IGF1RP08069 1367 aa30.62■■■□□ 2.49
CRKL-202ENST00000411769 UBTFP17480 764 aaKnown RBP30.61■■■□□ 2.49
CRKL-202ENST00000411769 TDRD9Q8NDG6 1382 aaKnown RBP30.59■■■□□ 2.49
CRKL-202ENST00000411769 ABCA5Q8WWZ7 1642 aa30.58■■■□□ 2.49
CRKL-202ENST00000411769 PCGF6Q9BYE7 350 aa30.57■■■□□ 2.48
CRKL-202ENST00000411769 TNIKQ9UKE5 1360 aa30.55■■■□□ 2.48
CRKL-202ENST00000411769 ERICH3Q5RHP9 1530 aa30.55■■■□□ 2.48
CRKL-202ENST00000411769 AQRO60306 1485 aaKnown RBP eCLIP30.51■■■□□ 2.473e-8■■■□□ 17.2
CRKL-202ENST00000411769 GAPVD1Q14C86 1478 aa30.51■■■□□ 2.47
CRKL-202ENST00000411769 CARMIL1Q5VZK9 1371 aa30.46■■■□□ 2.47
CRKL-202ENST00000411769 EIF4G3O43432 1585 aaKnown RBP30.46■■■□□ 2.47
CRKL-202ENST00000411769 CEP162Q5TB80 1403 aa30.44■■■□□ 2.46
CRKL-202ENST00000411769 PBRM1Q86U86 1689 aa30.41■■■□□ 2.46
CRKL-202ENST00000411769 CUL7Q14999 1698 aa30.41■■■□□ 2.46
CRKL-202ENST00000411769 GRIN2BQ13224 1484 aa30.26■■■□□ 2.43
CRKL-202ENST00000411769 RANGAP1P46060 587 aaPredicted RBP30.25■■■□□ 2.43
CRKL-202ENST00000411769 CLIP1P30622 1438 aa30.22■■■□□ 2.43
CRKL-202ENST00000411769 ADAMTS12P58397 1594 aa30.19■■■□□ 2.42
CRKL-202ENST00000411769 SNAPC4Q5SXM2 1469 aa30.18■■■□□ 2.42
CRKL-202ENST00000411769 FHAD1B1AJZ9 1412 aa30.14■■■□□ 2.42
CRKL-202ENST00000411769 CTTNBP2Q8WZ74 1663 aa30.12■■■□□ 2.41
CRKL-202ENST00000411769 MAGI1Q96QZ7 1491 aaPredicted RBP30.1■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms