Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
CSNK1G3Q9Y6M4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.72■■□□□ 1.55
CSNK1G3Q9Y6M4 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
CSNK1G3Q9Y6M4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
CSNK1G3Q9Y6M4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
CSNK1G3Q9Y6M4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CSNK1G3Q9Y6M4 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CSNK1G3Q9Y6M4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CSNK1G3Q9Y6M4 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CSNK1G3Q9Y6M4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.71■■□□□ 1.55
CSNK1G3Q9Y6M4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CSNK1G3Q9Y6M4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.69■■□□□ 1.54
CSNK1G3Q9Y6M4 U85056.1-201ENST00000616429 682 ntBASIC24.69■■□□□ 1.54
CSNK1G3Q9Y6M4 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
CSNK1G3Q9Y6M4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CSNK1G3Q9Y6M4 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.68■■□□□ 1.54
CSNK1G3Q9Y6M4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CSNK1G3Q9Y6M4 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.68■■□□□ 1.54
CSNK1G3Q9Y6M4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CSNK1G3Q9Y6M4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CSNK1G3Q9Y6M4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CSNK1G3Q9Y6M4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CSNK1G3Q9Y6M4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CSNK1G3Q9Y6M4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.66■■□□□ 1.54
CSNK1G3Q9Y6M4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.66■■□□□ 1.54
CSNK1G3Q9Y6M4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CSNK1G3Q9Y6M4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.66■■□□□ 1.54
CSNK1G3Q9Y6M4 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CSNK1G3Q9Y6M4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
CSNK1G3Q9Y6M4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CSNK1G3Q9Y6M4 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.64■■□□□ 1.54
CSNK1G3Q9Y6M4 AC100797.4-201ENST00000631653 1827 ntBASIC24.64■■□□□ 1.54
CSNK1G3Q9Y6M4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.64■■□□□ 1.54
CSNK1G3Q9Y6M4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
CSNK1G3Q9Y6M4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
CSNK1G3Q9Y6M4 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CSNK1G3Q9Y6M4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24.63■■□□□ 1.53
CSNK1G3Q9Y6M4 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CSNK1G3Q9Y6M4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.63■■□□□ 1.53
CSNK1G3Q9Y6M4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CSNK1G3Q9Y6M4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CSNK1G3Q9Y6M4 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CSNK1G3Q9Y6M4 AC018358.1-201ENST00000631079 1402 ntBASIC24.62■■□□□ 1.53
CSNK1G3Q9Y6M4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CSNK1G3Q9Y6M4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CSNK1G3Q9Y6M4 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
CSNK1G3Q9Y6M4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.61■■□□□ 1.53
CSNK1G3Q9Y6M4 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CSNK1G3Q9Y6M4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CSNK1G3Q9Y6M4 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CSNK1G3Q9Y6M4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC24.61■■□□□ 1.53
CSNK1G3Q9Y6M4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.61■■□□□ 1.53
CSNK1G3Q9Y6M4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CSNK1G3Q9Y6M4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CSNK1G3Q9Y6M4 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CSNK1G3Q9Y6M4 AL157400.5-201ENST00000507624 621 ntBASIC24.6■■□□□ 1.53
CSNK1G3Q9Y6M4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.6■■□□□ 1.53
CSNK1G3Q9Y6M4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.59■■□□□ 1.53
CSNK1G3Q9Y6M4 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC24.59■■□□□ 1.53
CSNK1G3Q9Y6M4 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CSNK1G3Q9Y6M4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.59■■□□□ 1.53
CSNK1G3Q9Y6M4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.59■■□□□ 1.53
CSNK1G3Q9Y6M4 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CSNK1G3Q9Y6M4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CSNK1G3Q9Y6M4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC24.58■■□□□ 1.53
CSNK1G3Q9Y6M4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
CSNK1G3Q9Y6M4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CSNK1G3Q9Y6M4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.58■■□□□ 1.53
CSNK1G3Q9Y6M4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.53
CSNK1G3Q9Y6M4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
CSNK1G3Q9Y6M4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CSNK1G3Q9Y6M4 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CSNK1G3Q9Y6M4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.57■■□□□ 1.52
CSNK1G3Q9Y6M4 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CSNK1G3Q9Y6M4 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.57■■□□□ 1.52
CSNK1G3Q9Y6M4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
CSNK1G3Q9Y6M4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CSNK1G3Q9Y6M4 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.57■■□□□ 1.52
CSNK1G3Q9Y6M4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CSNK1G3Q9Y6M4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.56■■□□□ 1.52
CSNK1G3Q9Y6M4 AL033527.3-201ENST00000566366 1196 ntBASIC24.56■■□□□ 1.52
CSNK1G3Q9Y6M4 KRT18P60-201ENST00000312876 1297 ntBASIC24.55■■□□□ 1.52
CSNK1G3Q9Y6M4 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
CSNK1G3Q9Y6M4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CSNK1G3Q9Y6M4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.55■■□□□ 1.52
CSNK1G3Q9Y6M4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
CSNK1G3Q9Y6M4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
CSNK1G3Q9Y6M4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.54■■□□□ 1.52
CSNK1G3Q9Y6M4 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
CSNK1G3Q9Y6M4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
CSNK1G3Q9Y6M4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
CSNK1G3Q9Y6M4 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
CSNK1G3Q9Y6M4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.53■■□□□ 1.52
CSNK1G3Q9Y6M4 AC007029.1-201ENST00000604183 313 ntBASIC24.53■■□□□ 1.52
CSNK1G3Q9Y6M4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
CSNK1G3Q9Y6M4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.52■■□□□ 1.52
CSNK1G3Q9Y6M4 TSPY13P-201ENST00000338964 914 ntBASIC24.52■■□□□ 1.52
CSNK1G3Q9Y6M4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CSNK1G3Q9Y6M4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
CSNK1G3Q9Y6M4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms