Protein–RNA interactions for Protein: Q9NY27

PPP4R2, Serine/threonine-protein phosphatase 4 regulatory subunit 2, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R2Q9NY27 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
PPP4R2Q9NY27 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
PPP4R2Q9NY27 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
PPP4R2Q9NY27 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC32.27■■■□□ 2.76
PPP4R2Q9NY27 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC32.27■■■□□ 2.76
PPP4R2Q9NY27 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
PPP4R2Q9NY27 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
PPP4R2Q9NY27 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC32.27■■■□□ 2.76
PPP4R2Q9NY27 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
PPP4R2Q9NY27 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.76
PPP4R2Q9NY27 AC093323.1-202ENST00000635031 2045 ntBASIC32.26■■■□□ 2.76
PPP4R2Q9NY27 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC32.26■■■□□ 2.76
PPP4R2Q9NY27 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
PPP4R2Q9NY27 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC32.25■■■□□ 2.75
PPP4R2Q9NY27 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC32.25■■■□□ 2.75
PPP4R2Q9NY27 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC32.25■■■□□ 2.75
PPP4R2Q9NY27 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC32.25■■■□□ 2.75
PPP4R2Q9NY27 DUSP8P4-201ENST00000399538 1761 ntBASIC32.24■■■□□ 2.75
PPP4R2Q9NY27 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC32.24■■■□□ 2.75
PPP4R2Q9NY27 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
PPP4R2Q9NY27 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC32.24■■■□□ 2.75
PPP4R2Q9NY27 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC32.23■■■□□ 2.75
PPP4R2Q9NY27 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
PPP4R2Q9NY27 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
PPP4R2Q9NY27 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC32.23■■■□□ 2.75
PPP4R2Q9NY27 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
PPP4R2Q9NY27 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC32.23■■■□□ 2.75
PPP4R2Q9NY27 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC32.22■■■□□ 2.75
PPP4R2Q9NY27 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
PPP4R2Q9NY27 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC32.22■■■□□ 2.75
PPP4R2Q9NY27 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
PPP4R2Q9NY27 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
PPP4R2Q9NY27 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC32.21■■■□□ 2.75
PPP4R2Q9NY27 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC32.21■■■□□ 2.75
PPP4R2Q9NY27 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC32.21■■■□□ 2.75
PPP4R2Q9NY27 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC32.21■■■□□ 2.75
PPP4R2Q9NY27 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
PPP4R2Q9NY27 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
PPP4R2Q9NY27 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC32.2■■■□□ 2.75
PPP4R2Q9NY27 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
PPP4R2Q9NY27 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC32.19■■■□□ 2.74
PPP4R2Q9NY27 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC32.18■■■□□ 2.74
PPP4R2Q9NY27 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
PPP4R2Q9NY27 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC32.18■■■□□ 2.74
PPP4R2Q9NY27 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
PPP4R2Q9NY27 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC32.17■■■□□ 2.74
PPP4R2Q9NY27 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC32.17■■■□□ 2.74
PPP4R2Q9NY27 AC092803.2-201ENST00000564287 1899 ntBASIC32.17■■■□□ 2.74
PPP4R2Q9NY27 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC32.17■■■□□ 2.74
PPP4R2Q9NY27 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
PPP4R2Q9NY27 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC32.15■■■□□ 2.74
PPP4R2Q9NY27 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC32.15■■■□□ 2.74
PPP4R2Q9NY27 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
PPP4R2Q9NY27 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC32.15■■■□□ 2.74
PPP4R2Q9NY27 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC32.14■■■□□ 2.74
PPP4R2Q9NY27 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
PPP4R2Q9NY27 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC32.14■■■□□ 2.74
PPP4R2Q9NY27 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC32.13■■■□□ 2.73
PPP4R2Q9NY27 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
PPP4R2Q9NY27 DENR-202ENST00000455982 1052 ntTSL 5 BASIC32.12■■■□□ 2.73
PPP4R2Q9NY27 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC32.12■■■□□ 2.73
PPP4R2Q9NY27 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC32.12■■■□□ 2.73
PPP4R2Q9NY27 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
PPP4R2Q9NY27 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
PPP4R2Q9NY27 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
PPP4R2Q9NY27 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
PPP4R2Q9NY27 MEST-211ENST00000437945 1455 ntTSL 5 BASIC32.1■■■□□ 2.73
PPP4R2Q9NY27 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC32.1■■■□□ 2.73
PPP4R2Q9NY27 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC32.1■■■□□ 2.73
PPP4R2Q9NY27 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC32.1■■■□□ 2.73
PPP4R2Q9NY27 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC32.1■■■□□ 2.73
PPP4R2Q9NY27 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC32.1■■■□□ 2.73
PPP4R2Q9NY27 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
PPP4R2Q9NY27 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
PPP4R2Q9NY27 SNAI3-AS1-204ENST00000567997 2048 ntBASIC32.09■■■□□ 2.73
PPP4R2Q9NY27 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC32.08■■■□□ 2.73
PPP4R2Q9NY27 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
PPP4R2Q9NY27 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
PPP4R2Q9NY27 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC32.07■■■□□ 2.72
PPP4R2Q9NY27 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC32.07■■■□□ 2.72
PPP4R2Q9NY27 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
PPP4R2Q9NY27 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC32.06■■■□□ 2.72
PPP4R2Q9NY27 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
PPP4R2Q9NY27 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC32.04■■■□□ 2.72
PPP4R2Q9NY27 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
PPP4R2Q9NY27 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC32.04■■■□□ 2.72
PPP4R2Q9NY27 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC32.04■■■□□ 2.72
PPP4R2Q9NY27 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC32.03■■■□□ 2.72
PPP4R2Q9NY27 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC32.03■■■□□ 2.72
PPP4R2Q9NY27 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC32.03■■■□□ 2.72
PPP4R2Q9NY27 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC32.02■■■□□ 2.72
PPP4R2Q9NY27 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
PPP4R2Q9NY27 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC32.01■■■□□ 2.72
PPP4R2Q9NY27 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC32.01■■■□□ 2.71
PPP4R2Q9NY27 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
PPP4R2Q9NY27 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC32.01■■■□□ 2.71
PPP4R2Q9NY27 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
PPP4R2Q9NY27 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
PPP4R2Q9NY27 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC31.99■■■□□ 2.71
PPP4R2Q9NY27 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Retrieved 100 of 98,524 protein–RNA pairs in 287.1 ms