Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDC42SE1Q9NRR8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CDC42SE1Q9NRR8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDC42SE1Q9NRR8 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDC42SE1Q9NRR8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CDC42SE1Q9NRR8 AL121603.2-201ENST00000557373 2117 ntBASIC13.19□□□□□ -0.3
CDC42SE1Q9NRR8 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CDC42SE1Q9NRR8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDC42SE1Q9NRR8 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDC42SE1Q9NRR8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CDC42SE1Q9NRR8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDC42SE1Q9NRR8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CDC42SE1Q9NRR8 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDC42SE1Q9NRR8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC13.17□□□□□ -0.3
CDC42SE1Q9NRR8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDC42SE1Q9NRR8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC13.17□□□□□ -0.3
CDC42SE1Q9NRR8 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CDC42SE1Q9NRR8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDC42SE1Q9NRR8 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC42SE1Q9NRR8 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC42SE1Q9NRR8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CDC42SE1Q9NRR8 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CDC42SE1Q9NRR8 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC42SE1Q9NRR8 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC42SE1Q9NRR8 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC13.15□□□□□ -0.3
CDC42SE1Q9NRR8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC42SE1Q9NRR8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC42SE1Q9NRR8 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC13.14□□□□□ -0.31
CDC42SE1Q9NRR8 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDC42SE1Q9NRR8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDC42SE1Q9NRR8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDC42SE1Q9NRR8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDC42SE1Q9NRR8 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDC42SE1Q9NRR8 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDC42SE1Q9NRR8 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDC42SE1Q9NRR8 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDC42SE1Q9NRR8 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDC42SE1Q9NRR8 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDC42SE1Q9NRR8 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDC42SE1Q9NRR8 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDC42SE1Q9NRR8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDC42SE1Q9NRR8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDC42SE1Q9NRR8 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDC42SE1Q9NRR8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC13.13□□□□□ -0.31
CDC42SE1Q9NRR8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDC42SE1Q9NRR8 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDC42SE1Q9NRR8 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDC42SE1Q9NRR8 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC13.12□□□□□ -0.31
CDC42SE1Q9NRR8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDC42SE1Q9NRR8 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDC42SE1Q9NRR8 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDC42SE1Q9NRR8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC42SE1Q9NRR8 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC42SE1Q9NRR8 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC13.11□□□□□ -0.31
CDC42SE1Q9NRR8 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC42SE1Q9NRR8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC42SE1Q9NRR8 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC42SE1Q9NRR8 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CDC42SE1Q9NRR8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CDC42SE1Q9NRR8 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDC42SE1Q9NRR8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDC42SE1Q9NRR8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC13.1□□□□□ -0.31
CDC42SE1Q9NRR8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC13.1□□□□□ -0.31
CDC42SE1Q9NRR8 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDC42SE1Q9NRR8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDC42SE1Q9NRR8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CDC42SE1Q9NRR8 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CDC42SE1Q9NRR8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDC42SE1Q9NRR8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CDC42SE1Q9NRR8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDC42SE1Q9NRR8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC13.09□□□□□ -0.31
CDC42SE1Q9NRR8 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDC42SE1Q9NRR8 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDC42SE1Q9NRR8 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CDC42SE1Q9NRR8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC13.08□□□□□ -0.31
CDC42SE1Q9NRR8 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CDC42SE1Q9NRR8 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDC42SE1Q9NRR8 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDC42SE1Q9NRR8 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDC42SE1Q9NRR8 AC068473.5-201ENST00000616428 2072 ntBASIC13.08□□□□□ -0.32
CDC42SE1Q9NRR8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDC42SE1Q9NRR8 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDC42SE1Q9NRR8 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDC42SE1Q9NRR8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDC42SE1Q9NRR8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDC42SE1Q9NRR8 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CDC42SE1Q9NRR8 ST7-AS1-201ENST00000456775 1889 ntBASIC13.08□□□□□ -0.32
CDC42SE1Q9NRR8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC13.07□□□□□ -0.32
CDC42SE1Q9NRR8 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC42SE1Q9NRR8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC42SE1Q9NRR8 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CDC42SE1Q9NRR8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC42SE1Q9NRR8 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDC42SE1Q9NRR8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC13.07□□□□□ -0.32
CDC42SE1Q9NRR8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC13.07□□□□□ -0.32
CDC42SE1Q9NRR8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDC42SE1Q9NRR8 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDC42SE1Q9NRR8 PKD1P6-201ENST00000343738 4769 ntBASIC13.06□□□□□ -0.32
CDC42SE1Q9NRR8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDC42SE1Q9NRR8 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms