Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
RC3H2Q9HBD1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RC3H2Q9HBD1 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RC3H2Q9HBD1 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RC3H2Q9HBD1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RC3H2Q9HBD1 RARRES2P1-201ENST00000474487 481 ntBASIC27.32■■□□□ 1.96
RC3H2Q9HBD1 AC007029.1-201ENST00000604183 313 ntBASIC27.32■■□□□ 1.96
RC3H2Q9HBD1 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RC3H2Q9HBD1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC27.31■■□□□ 1.96
RC3H2Q9HBD1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC27.31■■□□□ 1.96
RC3H2Q9HBD1 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
RC3H2Q9HBD1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC27.3■■□□□ 1.96
RC3H2Q9HBD1 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RC3H2Q9HBD1 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
RC3H2Q9HBD1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC27.29■■□□□ 1.96
RC3H2Q9HBD1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
RC3H2Q9HBD1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC27.29■■□□□ 1.96
RC3H2Q9HBD1 AC129492.7-201ENST00000622992 756 ntBASIC27.29■■□□□ 1.96
RC3H2Q9HBD1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
RC3H2Q9HBD1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC27.28■■□□□ 1.96
RC3H2Q9HBD1 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RC3H2Q9HBD1 AP004833.2-201ENST00000532228 1454 ntBASIC27.27■■□□□ 1.96
RC3H2Q9HBD1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RC3H2Q9HBD1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RC3H2Q9HBD1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RC3H2Q9HBD1 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
RC3H2Q9HBD1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC27.25■■□□□ 1.95
RC3H2Q9HBD1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RC3H2Q9HBD1 AC009831.1-201ENST00000580420 1582 ntBASIC27.25■■□□□ 1.95
RC3H2Q9HBD1 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RC3H2Q9HBD1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
RC3H2Q9HBD1 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
RC3H2Q9HBD1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC27.24■■□□□ 1.95
RC3H2Q9HBD1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RC3H2Q9HBD1 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC27.23■■□□□ 1.95
RC3H2Q9HBD1 AL592293.1-201ENST00000502889 1188 ntBASIC27.23■■□□□ 1.95
RC3H2Q9HBD1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
RC3H2Q9HBD1 REST-210ENST00000638187 1334 ntTSL 5 BASIC27.22■■□□□ 1.95
RC3H2Q9HBD1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC27.22■■□□□ 1.95
RC3H2Q9HBD1 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RC3H2Q9HBD1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
RC3H2Q9HBD1 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RC3H2Q9HBD1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
RC3H2Q9HBD1 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
RC3H2Q9HBD1 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RC3H2Q9HBD1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC27.21■■□□□ 1.95
RC3H2Q9HBD1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RC3H2Q9HBD1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
RC3H2Q9HBD1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
RC3H2Q9HBD1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
RC3H2Q9HBD1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC27.2■■□□□ 1.94
RC3H2Q9HBD1 ST7-AS1-201ENST00000456775 1889 ntBASIC27.2■■□□□ 1.94
RC3H2Q9HBD1 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
RC3H2Q9HBD1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
RC3H2Q9HBD1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
RC3H2Q9HBD1 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
RC3H2Q9HBD1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RC3H2Q9HBD1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC27.19■■□□□ 1.94
RC3H2Q9HBD1 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RC3H2Q9HBD1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC27.18■■□□□ 1.94
RC3H2Q9HBD1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
RC3H2Q9HBD1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC27.18■■□□□ 1.94
RC3H2Q9HBD1 AC133552.2-201ENST00000619106 1032 ntBASIC27.18■■□□□ 1.94
RC3H2Q9HBD1 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC27.18■■□□□ 1.94
RC3H2Q9HBD1 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
RC3H2Q9HBD1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
RC3H2Q9HBD1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
RC3H2Q9HBD1 AC100797.4-201ENST00000631653 1827 ntBASIC27.16■■□□□ 1.94
RC3H2Q9HBD1 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RC3H2Q9HBD1 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
RC3H2Q9HBD1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
RC3H2Q9HBD1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC27.16■■□□□ 1.94
RC3H2Q9HBD1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC27.16■■□□□ 1.94
RC3H2Q9HBD1 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
RC3H2Q9HBD1 AC025884.2-201ENST00000553429 711 ntBASIC27.15■■□□□ 1.94
RC3H2Q9HBD1 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC27.15■■□□□ 1.94
RC3H2Q9HBD1 SMPD5-203ENST00000639008 1464 ntBASIC27.14■■□□□ 1.94
RC3H2Q9HBD1 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.93
RC3H2Q9HBD1 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
RC3H2Q9HBD1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
RC3H2Q9HBD1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RC3H2Q9HBD1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
RC3H2Q9HBD1 AC026202.3-201ENST00000600805 1127 ntBASIC27.13■■□□□ 1.93
RC3H2Q9HBD1 AL359258.2-201ENST00000564063 1566 ntBASIC27.13■■□□□ 1.93
RC3H2Q9HBD1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
RC3H2Q9HBD1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RC3H2Q9HBD1 HES4-204ENST00000484667 667 ntTSL 3 BASIC27.12■■□□□ 1.93
RC3H2Q9HBD1 DUX4L18-201ENST00000553347 1267 ntBASIC27.12■■□□□ 1.93
RC3H2Q9HBD1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC27.12■■□□□ 1.93
RC3H2Q9HBD1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC27.12■■□□□ 1.93
RC3H2Q9HBD1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
RC3H2Q9HBD1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
RC3H2Q9HBD1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC27.11■■□□□ 1.93
RC3H2Q9HBD1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC27.11■■□□□ 1.93
RC3H2Q9HBD1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
RC3H2Q9HBD1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
RC3H2Q9HBD1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
RC3H2Q9HBD1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
RC3H2Q9HBD1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC27.1■■□□□ 1.93
RC3H2Q9HBD1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms