Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
UPF2Q9HAU5 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC30.67■■■□□ 2.5
UPF2Q9HAU5 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC30.66■■■□□ 2.5
UPF2Q9HAU5 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC30.66■■■□□ 2.5
UPF2Q9HAU5 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
UPF2Q9HAU5 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC30.64■■■□□ 2.5
UPF2Q9HAU5 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
UPF2Q9HAU5 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
UPF2Q9HAU5 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
UPF2Q9HAU5 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
UPF2Q9HAU5 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
UPF2Q9HAU5 CAHM-201ENST00000604200 896 ntBASIC30.63■■■□□ 2.49
UPF2Q9HAU5 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
UPF2Q9HAU5 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
UPF2Q9HAU5 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC30.63■■■□□ 2.49
UPF2Q9HAU5 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
UPF2Q9HAU5 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
UPF2Q9HAU5 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC30.62■■■□□ 2.49
UPF2Q9HAU5 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
UPF2Q9HAU5 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
UPF2Q9HAU5 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
UPF2Q9HAU5 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC30.61■■■□□ 2.49
UPF2Q9HAU5 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
UPF2Q9HAU5 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC30.6■■■□□ 2.49
UPF2Q9HAU5 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
UPF2Q9HAU5 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.6■■■□□ 2.49
UPF2Q9HAU5 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC30.59■■■□□ 2.49
UPF2Q9HAU5 AC145676.1-201ENST00000514988 2004 ntBASIC30.59■■■□□ 2.49
UPF2Q9HAU5 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
UPF2Q9HAU5 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
UPF2Q9HAU5 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.58■■■□□ 2.49
UPF2Q9HAU5 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.57■■■□□ 2.48
UPF2Q9HAU5 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
UPF2Q9HAU5 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC30.57■■■□□ 2.48
UPF2Q9HAU5 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC30.56■■■□□ 2.48
UPF2Q9HAU5 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
UPF2Q9HAU5 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
UPF2Q9HAU5 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
UPF2Q9HAU5 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.55■■■□□ 2.48
UPF2Q9HAU5 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
UPF2Q9HAU5 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
UPF2Q9HAU5 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC30.55■■■□□ 2.48
UPF2Q9HAU5 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
UPF2Q9HAU5 AC135983.2-203ENST00000454486 1613 ntBASIC30.55■■■□□ 2.48
UPF2Q9HAU5 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
UPF2Q9HAU5 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
UPF2Q9HAU5 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.54■■■□□ 2.48
UPF2Q9HAU5 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
UPF2Q9HAU5 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.53■■■□□ 2.48
UPF2Q9HAU5 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC30.52■■■□□ 2.48
UPF2Q9HAU5 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC30.52■■■□□ 2.48
UPF2Q9HAU5 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
UPF2Q9HAU5 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.48
UPF2Q9HAU5 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
UPF2Q9HAU5 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
UPF2Q9HAU5 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC30.5■■■□□ 2.47
UPF2Q9HAU5 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC30.5■■■□□ 2.47
UPF2Q9HAU5 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
UPF2Q9HAU5 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC30.5■■■□□ 2.47
UPF2Q9HAU5 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
UPF2Q9HAU5 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
UPF2Q9HAU5 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
UPF2Q9HAU5 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC30.48■■■□□ 2.47
UPF2Q9HAU5 AC136428.2-201ENST00000563187 214 ntBASIC30.48■■■□□ 2.47
UPF2Q9HAU5 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
UPF2Q9HAU5 MIR762-201ENST00000390236 83 ntBASIC30.47■■■□□ 2.47
UPF2Q9HAU5 AC097358.2-201ENST00000607541 1159 ntBASIC30.47■■■□□ 2.47
UPF2Q9HAU5 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC30.47■■■□□ 2.47
UPF2Q9HAU5 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC30.46■■■□□ 2.47
UPF2Q9HAU5 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.46■■■□□ 2.47
UPF2Q9HAU5 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
UPF2Q9HAU5 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
UPF2Q9HAU5 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC30.45■■■□□ 2.47
UPF2Q9HAU5 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
UPF2Q9HAU5 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
UPF2Q9HAU5 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.46
UPF2Q9HAU5 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
UPF2Q9HAU5 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
UPF2Q9HAU5 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
UPF2Q9HAU5 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
UPF2Q9HAU5 WHAMMP2-203ENST00000563942 1603 ntBASIC30.44■■■□□ 2.46
UPF2Q9HAU5 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
UPF2Q9HAU5 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
UPF2Q9HAU5 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
UPF2Q9HAU5 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
UPF2Q9HAU5 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
UPF2Q9HAU5 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.43■■■□□ 2.46
UPF2Q9HAU5 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
UPF2Q9HAU5 AC020928.2-201ENST00000588717 2197 ntBASIC30.42■■■□□ 2.46
UPF2Q9HAU5 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.42■■■□□ 2.46
UPF2Q9HAU5 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC30.41■■■□□ 2.46
UPF2Q9HAU5 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.41■■■□□ 2.46
UPF2Q9HAU5 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC30.41■■■□□ 2.46
UPF2Q9HAU5 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC30.41■■■□□ 2.46
UPF2Q9HAU5 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.41■■■□□ 2.46
UPF2Q9HAU5 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC30.41■■■□□ 2.46
UPF2Q9HAU5 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
UPF2Q9HAU5 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC30.41■■■□□ 2.46
UPF2Q9HAU5 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
UPF2Q9HAU5 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms