Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
NANOGQ9H9S0 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.83■■□□□ 1.41
NANOGQ9H9S0 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.82■■□□□ 1.4
NANOGQ9H9S0 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NANOGQ9H9S0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.82■■□□□ 1.4
NANOGQ9H9S0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
NANOGQ9H9S0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
NANOGQ9H9S0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
NANOGQ9H9S0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NANOGQ9H9S0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.81■■□□□ 1.4
NANOGQ9H9S0 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.81■■□□□ 1.4
NANOGQ9H9S0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NANOGQ9H9S0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
NANOGQ9H9S0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.8■■□□□ 1.4
NANOGQ9H9S0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.8■■□□□ 1.4
NANOGQ9H9S0 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
NANOGQ9H9S0 WHAMMP2-203ENST00000563942 1603 ntBASIC23.8■■□□□ 1.4
NANOGQ9H9S0 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NANOGQ9H9S0 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC23.79■■□□□ 1.4
NANOGQ9H9S0 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
NANOGQ9H9S0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NANOGQ9H9S0 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NANOGQ9H9S0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.78■■□□□ 1.4
NANOGQ9H9S0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NANOGQ9H9S0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NANOGQ9H9S0 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
NANOGQ9H9S0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.78■■□□□ 1.4
NANOGQ9H9S0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.78■■□□□ 1.4
NANOGQ9H9S0 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NANOGQ9H9S0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.78■■□□□ 1.4
NANOGQ9H9S0 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.78■■□□□ 1.4
NANOGQ9H9S0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NANOGQ9H9S0 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
NANOGQ9H9S0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NANOGQ9H9S0 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.76■■□□□ 1.39
NANOGQ9H9S0 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
NANOGQ9H9S0 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NANOGQ9H9S0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
NANOGQ9H9S0 AC145676.1-201ENST00000514988 2004 ntBASIC23.76■■□□□ 1.39
NANOGQ9H9S0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NANOGQ9H9S0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.75■■□□□ 1.39
NANOGQ9H9S0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NANOGQ9H9S0 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NANOGQ9H9S0 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NANOGQ9H9S0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.74■■□□□ 1.39
NANOGQ9H9S0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
NANOGQ9H9S0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NANOGQ9H9S0 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NANOGQ9H9S0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
NANOGQ9H9S0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
NANOGQ9H9S0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NANOGQ9H9S0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.74■■□□□ 1.39
NANOGQ9H9S0 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC23.73■■□□□ 1.39
NANOGQ9H9S0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.73■■□□□ 1.39
NANOGQ9H9S0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
NANOGQ9H9S0 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.73■■□□□ 1.39
NANOGQ9H9S0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
NANOGQ9H9S0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
NANOGQ9H9S0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
NANOGQ9H9S0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.71■■□□□ 1.39
NANOGQ9H9S0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
NANOGQ9H9S0 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
NANOGQ9H9S0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
NANOGQ9H9S0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
NANOGQ9H9S0 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC23.71■■□□□ 1.39
NANOGQ9H9S0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.71■■□□□ 1.39
NANOGQ9H9S0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
NANOGQ9H9S0 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
NANOGQ9H9S0 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.7■■□□□ 1.38
NANOGQ9H9S0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.7■■□□□ 1.38
NANOGQ9H9S0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.7■■□□□ 1.38
NANOGQ9H9S0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
NANOGQ9H9S0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.69■■□□□ 1.38
NANOGQ9H9S0 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
NANOGQ9H9S0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NANOGQ9H9S0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
NANOGQ9H9S0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
NANOGQ9H9S0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.67■■□□□ 1.38
NANOGQ9H9S0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NANOGQ9H9S0 AC020928.2-201ENST00000588717 2197 ntBASIC23.67■■□□□ 1.38
NANOGQ9H9S0 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NANOGQ9H9S0 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
NANOGQ9H9S0 LINC00273-201ENST00000539813 1452 ntBASIC23.67■■□□□ 1.38
NANOGQ9H9S0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
NANOGQ9H9S0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.67■■□□□ 1.38
NANOGQ9H9S0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
NANOGQ9H9S0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.66■■□□□ 1.38
NANOGQ9H9S0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC23.66■■□□□ 1.38
NANOGQ9H9S0 AC005559.1-201ENST00000589661 871 ntBASIC23.66■■□□□ 1.38
NANOGQ9H9S0 AC108673.1-201ENST00000510422 1159 ntBASIC23.65■■□□□ 1.38
NANOGQ9H9S0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NANOGQ9H9S0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NANOGQ9H9S0 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
NANOGQ9H9S0 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC23.64■■□□□ 1.37
NANOGQ9H9S0 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NANOGQ9H9S0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
NANOGQ9H9S0 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NANOGQ9H9S0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NANOGQ9H9S0 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC23.63■■□□□ 1.37
NANOGQ9H9S0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms