Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.97■■□□□ 1.91
SNX25Q9H3E2 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
SNX25Q9H3E2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.96■■□□□ 1.91
SNX25Q9H3E2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SNX25Q9H3E2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
SNX25Q9H3E2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
SNX25Q9H3E2 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.94■■□□□ 1.9
SNX25Q9H3E2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
SNX25Q9H3E2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SNX25Q9H3E2 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SNX25Q9H3E2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
SNX25Q9H3E2 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.94■■□□□ 1.9
SNX25Q9H3E2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
SNX25Q9H3E2 AC148477.6-201ENST00000623746 465 ntBASIC26.94■■□□□ 1.9
SNX25Q9H3E2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SNX25Q9H3E2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SNX25Q9H3E2 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
SNX25Q9H3E2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SNX25Q9H3E2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
SNX25Q9H3E2 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.93■■□□□ 1.9
SNX25Q9H3E2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
SNX25Q9H3E2 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SNX25Q9H3E2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SNX25Q9H3E2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
SNX25Q9H3E2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SNX25Q9H3E2 DRD5P2-201ENST00000421395 2012 ntBASIC26.92■■□□□ 1.9
SNX25Q9H3E2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.91■■□□□ 1.9
SNX25Q9H3E2 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SNX25Q9H3E2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SNX25Q9H3E2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
SNX25Q9H3E2 MIR219A2-201ENST00000608502 1504 ntBASIC26.9■■□□□ 1.9
SNX25Q9H3E2 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
SNX25Q9H3E2 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
SNX25Q9H3E2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.9■■□□□ 1.9
SNX25Q9H3E2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
SNX25Q9H3E2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SNX25Q9H3E2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
SNX25Q9H3E2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.89■■□□□ 1.9
SNX25Q9H3E2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
SNX25Q9H3E2 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SNX25Q9H3E2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.88■■□□□ 1.89
SNX25Q9H3E2 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.88■■□□□ 1.89
SNX25Q9H3E2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SNX25Q9H3E2 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.86■■□□□ 1.89
SNX25Q9H3E2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SNX25Q9H3E2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SNX25Q9H3E2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.86■■□□□ 1.89
SNX25Q9H3E2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SNX25Q9H3E2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.86■■□□□ 1.89
SNX25Q9H3E2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.86■■□□□ 1.89
SNX25Q9H3E2 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SNX25Q9H3E2 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.85■■□□□ 1.89
SNX25Q9H3E2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
SNX25Q9H3E2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.85■■□□□ 1.89
SNX25Q9H3E2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.85■■□□□ 1.89
SNX25Q9H3E2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SNX25Q9H3E2 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
SNX25Q9H3E2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.84■■□□□ 1.89
SNX25Q9H3E2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SNX25Q9H3E2 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SNX25Q9H3E2 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SNX25Q9H3E2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
SNX25Q9H3E2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.84■■□□□ 1.89
SNX25Q9H3E2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
SNX25Q9H3E2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SNX25Q9H3E2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
SNX25Q9H3E2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SNX25Q9H3E2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.81■■□□□ 1.88
SNX25Q9H3E2 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.81■■□□□ 1.88
SNX25Q9H3E2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
SNX25Q9H3E2 AC018358.1-201ENST00000631079 1402 ntBASIC26.81■■□□□ 1.88
SNX25Q9H3E2 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
SNX25Q9H3E2 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SNX25Q9H3E2 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SNX25Q9H3E2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SNX25Q9H3E2 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
SNX25Q9H3E2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
SNX25Q9H3E2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
SNX25Q9H3E2 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.78■■□□□ 1.88
SNX25Q9H3E2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
SNX25Q9H3E2 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SNX25Q9H3E2 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SNX25Q9H3E2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.78■■□□□ 1.88
SNX25Q9H3E2 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SNX25Q9H3E2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.77■■□□□ 1.88
SNX25Q9H3E2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SNX25Q9H3E2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
SNX25Q9H3E2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.75■■□□□ 1.87
SNX25Q9H3E2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
SNX25Q9H3E2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.75■■□□□ 1.87
SNX25Q9H3E2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
SNX25Q9H3E2 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.75■■□□□ 1.87
SNX25Q9H3E2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.74■■□□□ 1.87
SNX25Q9H3E2 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
SNX25Q9H3E2 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
SNX25Q9H3E2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SNX25Q9H3E2 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.73■■□□□ 1.87
SNX25Q9H3E2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SNX25Q9H3E2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.73■■□□□ 1.87
SNX25Q9H3E2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 298.2 ms