Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
CYSTM1Q9H1C7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC15.03■□□□□ -0
CYSTM1Q9H1C7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CYSTM1Q9H1C7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CYSTM1Q9H1C7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC15.02■□□□□ -0
CYSTM1Q9H1C7 C9orf163-202ENST00000624034 2573 ntBASIC15.02■□□□□ -0
CYSTM1Q9H1C7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC15.02■□□□□ -0
CYSTM1Q9H1C7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC15.02■□□□□ -0
CYSTM1Q9H1C7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
CYSTM1Q9H1C7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
CYSTM1Q9H1C7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CYSTM1Q9H1C7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CYSTM1Q9H1C7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC15.01□□□□□ -0.01
CYSTM1Q9H1C7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC15.01□□□□□ -0.01
CYSTM1Q9H1C7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CYSTM1Q9H1C7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CYSTM1Q9H1C7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC15.01□□□□□ -0.01
CYSTM1Q9H1C7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CYSTM1Q9H1C7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC15□□□□□ -0.01
CYSTM1Q9H1C7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC15□□□□□ -0.01
CYSTM1Q9H1C7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CYSTM1Q9H1C7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC15□□□□□ -0.01
CYSTM1Q9H1C7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CYSTM1Q9H1C7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC15□□□□□ -0.01
CYSTM1Q9H1C7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC15□□□□□ -0.01
CYSTM1Q9H1C7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
CYSTM1Q9H1C7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CYSTM1Q9H1C7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CYSTM1Q9H1C7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CYSTM1Q9H1C7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CYSTM1Q9H1C7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CYSTM1Q9H1C7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CYSTM1Q9H1C7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CYSTM1Q9H1C7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC14.98□□□□□ -0.01
CYSTM1Q9H1C7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CYSTM1Q9H1C7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CYSTM1Q9H1C7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CYSTM1Q9H1C7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CYSTM1Q9H1C7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC14.97□□□□□ -0.01
CYSTM1Q9H1C7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CYSTM1Q9H1C7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CYSTM1Q9H1C7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CYSTM1Q9H1C7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CYSTM1Q9H1C7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC14.96□□□□□ -0.01
CYSTM1Q9H1C7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CYSTM1Q9H1C7 AL121603.2-201ENST00000557373 2117 ntBASIC14.96□□□□□ -0.01
CYSTM1Q9H1C7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CYSTM1Q9H1C7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CYSTM1Q9H1C7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CYSTM1Q9H1C7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CYSTM1Q9H1C7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
CYSTM1Q9H1C7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CYSTM1Q9H1C7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CYSTM1Q9H1C7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CYSTM1Q9H1C7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CYSTM1Q9H1C7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CYSTM1Q9H1C7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CYSTM1Q9H1C7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC14.93□□□□□ -0.02
CYSTM1Q9H1C7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CYSTM1Q9H1C7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC14.93□□□□□ -0.02
CYSTM1Q9H1C7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC14.92□□□□□ -0.02
CYSTM1Q9H1C7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CYSTM1Q9H1C7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC14.92□□□□□ -0.02
CYSTM1Q9H1C7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CYSTM1Q9H1C7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CYSTM1Q9H1C7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CYSTM1Q9H1C7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CYSTM1Q9H1C7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CYSTM1Q9H1C7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CYSTM1Q9H1C7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CYSTM1Q9H1C7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC14.91□□□□□ -0.02
CYSTM1Q9H1C7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CYSTM1Q9H1C7 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CYSTM1Q9H1C7 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CYSTM1Q9H1C7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CYSTM1Q9H1C7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CYSTM1Q9H1C7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CYSTM1Q9H1C7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CYSTM1Q9H1C7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CYSTM1Q9H1C7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CYSTM1Q9H1C7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CYSTM1Q9H1C7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CYSTM1Q9H1C7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CYSTM1Q9H1C7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CYSTM1Q9H1C7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CYSTM1Q9H1C7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CYSTM1Q9H1C7 BX255925.1-201ENST00000566954 1854 ntBASIC14.88□□□□□ -0.03
CYSTM1Q9H1C7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CYSTM1Q9H1C7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CYSTM1Q9H1C7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CYSTM1Q9H1C7 AC145676.1-201ENST00000514988 2004 ntBASIC14.87□□□□□ -0.03
CYSTM1Q9H1C7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CYSTM1Q9H1C7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC14.87□□□□□ -0.03
CYSTM1Q9H1C7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CYSTM1Q9H1C7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CYSTM1Q9H1C7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CYSTM1Q9H1C7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CYSTM1Q9H1C7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CYSTM1Q9H1C7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CYSTM1Q9H1C7 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 1132.1 ms