Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
KRTAP4-1Q9BYQ7 DUX4L18-201ENST00000553347 1267 ntBASIC13.34□□□□□ -0.27
KRTAP4-1Q9BYQ7 AC129492.7-201ENST00000622992 756 ntBASIC13.34□□□□□ -0.27
KRTAP4-1Q9BYQ7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC13.34□□□□□ -0.27
KRTAP4-1Q9BYQ7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
KRTAP4-1Q9BYQ7 HES4-204ENST00000484667 667 ntTSL 3 BASIC13.33□□□□□ -0.28
KRTAP4-1Q9BYQ7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC13.33□□□□□ -0.28
KRTAP4-1Q9BYQ7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
KRTAP4-1Q9BYQ7 AC009831.1-201ENST00000580420 1582 ntBASIC13.32□□□□□ -0.28
KRTAP4-1Q9BYQ7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KRTAP4-1Q9BYQ7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KRTAP4-1Q9BYQ7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC13.32□□□□□ -0.28
KRTAP4-1Q9BYQ7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KRTAP4-1Q9BYQ7 AL592293.1-201ENST00000502889 1188 ntBASIC13.32□□□□□ -0.28
KRTAP4-1Q9BYQ7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
KRTAP4-1Q9BYQ7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC13.32□□□□□ -0.28
KRTAP4-1Q9BYQ7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
KRTAP4-1Q9BYQ7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
KRTAP4-1Q9BYQ7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KRTAP4-1Q9BYQ7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
KRTAP4-1Q9BYQ7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC13.31□□□□□ -0.28
KRTAP4-1Q9BYQ7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KRTAP4-1Q9BYQ7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KRTAP4-1Q9BYQ7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
KRTAP4-1Q9BYQ7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KRTAP4-1Q9BYQ7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC13.3□□□□□ -0.28
KRTAP4-1Q9BYQ7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
KRTAP4-1Q9BYQ7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
KRTAP4-1Q9BYQ7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC13.3□□□□□ -0.28
KRTAP4-1Q9BYQ7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KRTAP4-1Q9BYQ7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC13.3□□□□□ -0.28
KRTAP4-1Q9BYQ7 AC007029.1-201ENST00000604183 313 ntBASIC13.3□□□□□ -0.28
KRTAP4-1Q9BYQ7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
KRTAP4-1Q9BYQ7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
KRTAP4-1Q9BYQ7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KRTAP4-1Q9BYQ7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
KRTAP4-1Q9BYQ7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
KRTAP4-1Q9BYQ7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
KRTAP4-1Q9BYQ7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KRTAP4-1Q9BYQ7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KRTAP4-1Q9BYQ7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC13.28□□□□□ -0.28
KRTAP4-1Q9BYQ7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
KRTAP4-1Q9BYQ7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC13.28□□□□□ -0.28
KRTAP4-1Q9BYQ7 AC133552.2-201ENST00000619106 1032 ntBASIC13.28□□□□□ -0.28
KRTAP4-1Q9BYQ7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
KRTAP4-1Q9BYQ7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
KRTAP4-1Q9BYQ7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
KRTAP4-1Q9BYQ7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC13.27□□□□□ -0.29
KRTAP4-1Q9BYQ7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC13.27□□□□□ -0.29
KRTAP4-1Q9BYQ7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
KRTAP4-1Q9BYQ7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
KRTAP4-1Q9BYQ7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
KRTAP4-1Q9BYQ7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC13.26□□□□□ -0.29
KRTAP4-1Q9BYQ7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KRTAP4-1Q9BYQ7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC13.26□□□□□ -0.29
KRTAP4-1Q9BYQ7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC13.26□□□□□ -0.29
KRTAP4-1Q9BYQ7 AL451085.2-201ENST00000605085 799 ntBASIC13.26□□□□□ -0.29
KRTAP4-1Q9BYQ7 AC100797.4-201ENST00000631653 1827 ntBASIC13.26□□□□□ -0.29
KRTAP4-1Q9BYQ7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
KRTAP4-1Q9BYQ7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
KRTAP4-1Q9BYQ7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
KRTAP4-1Q9BYQ7 AC026202.3-201ENST00000600805 1127 ntBASIC13.25□□□□□ -0.29
KRTAP4-1Q9BYQ7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC13.25□□□□□ -0.29
KRTAP4-1Q9BYQ7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
KRTAP4-1Q9BYQ7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
KRTAP4-1Q9BYQ7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
KRTAP4-1Q9BYQ7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC13.24□□□□□ -0.29
KRTAP4-1Q9BYQ7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
KRTAP4-1Q9BYQ7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
KRTAP4-1Q9BYQ7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
KRTAP4-1Q9BYQ7 ST7-AS1-201ENST00000456775 1889 ntBASIC13.23□□□□□ -0.29
KRTAP4-1Q9BYQ7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
KRTAP4-1Q9BYQ7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC13.23□□□□□ -0.29
KRTAP4-1Q9BYQ7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
KRTAP4-1Q9BYQ7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC13.23□□□□□ -0.29
KRTAP4-1Q9BYQ7 SPCS2P3-201ENST00000500401 656 ntBASIC13.23□□□□□ -0.29
KRTAP4-1Q9BYQ7 AC126177.7-201ENST00000547904 679 ntBASIC13.23□□□□□ -0.29
KRTAP4-1Q9BYQ7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
KRTAP4-1Q9BYQ7 AL035685.1-201ENST00000636663 812 ntBASIC13.23□□□□□ -0.29
KRTAP4-1Q9BYQ7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
KRTAP4-1Q9BYQ7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC13.23□□□□□ -0.29
KRTAP4-1Q9BYQ7 SMPD5-203ENST00000639008 1464 ntBASIC13.23□□□□□ -0.29
KRTAP4-1Q9BYQ7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
KRTAP4-1Q9BYQ7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
KRTAP4-1Q9BYQ7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
KRTAP4-1Q9BYQ7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC13.22□□□□□ -0.29
KRTAP4-1Q9BYQ7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC13.22□□□□□ -0.29
KRTAP4-1Q9BYQ7 AL359258.2-201ENST00000564063 1566 ntBASIC13.22□□□□□ -0.29
KRTAP4-1Q9BYQ7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC13.22□□□□□ -0.29
KRTAP4-1Q9BYQ7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
KRTAP4-1Q9BYQ7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC13.21□□□□□ -0.29
KRTAP4-1Q9BYQ7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
KRTAP4-1Q9BYQ7 DUX4L9-201ENST00000449051 1259 ntBASIC13.21□□□□□ -0.29
KRTAP4-1Q9BYQ7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC13.21□□□□□ -0.29
KRTAP4-1Q9BYQ7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
KRTAP4-1Q9BYQ7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
KRTAP4-1Q9BYQ7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
KRTAP4-1Q9BYQ7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
KRTAP4-1Q9BYQ7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
KRTAP4-1Q9BYQ7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms