Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VRK1Q99986 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
VRK1Q99986 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
VRK1Q99986 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.93■■□□□ 1.1
VRK1Q99986 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
VRK1Q99986 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VRK1Q99986 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
VRK1Q99986 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
VRK1Q99986 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VRK1Q99986 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
VRK1Q99986 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
VRK1Q99986 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VRK1Q99986 WHAMMP2-203ENST00000563942 1603 ntBASIC21.91■■□□□ 1.1
VRK1Q99986 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VRK1Q99986 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
VRK1Q99986 AC135983.2-203ENST00000454486 1613 ntBASIC21.9■■□□□ 1.1
VRK1Q99986 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.89■■□□□ 1.09
VRK1Q99986 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
VRK1Q99986 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
VRK1Q99986 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.89■■□□□ 1.09
VRK1Q99986 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
VRK1Q99986 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
VRK1Q99986 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.89■■□□□ 1.09
VRK1Q99986 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
VRK1Q99986 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.88■■□□□ 1.09
VRK1Q99986 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.87■■□□□ 1.09
VRK1Q99986 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VRK1Q99986 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
VRK1Q99986 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
VRK1Q99986 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.85■■□□□ 1.09
VRK1Q99986 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
VRK1Q99986 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
VRK1Q99986 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VRK1Q99986 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
VRK1Q99986 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
VRK1Q99986 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
VRK1Q99986 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VRK1Q99986 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
VRK1Q99986 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VRK1Q99986 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
VRK1Q99986 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.84■■□□□ 1.09
VRK1Q99986 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
VRK1Q99986 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
VRK1Q99986 HSD17B1P1-201ENST00000590052 955 ntBASIC21.84■■□□□ 1.09
VRK1Q99986 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
VRK1Q99986 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
VRK1Q99986 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
VRK1Q99986 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
VRK1Q99986 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
VRK1Q99986 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
VRK1Q99986 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
VRK1Q99986 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
VRK1Q99986 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VRK1Q99986 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.83■■□□□ 1.09
VRK1Q99986 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
VRK1Q99986 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VRK1Q99986 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
VRK1Q99986 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.82■■□□□ 1.08
VRK1Q99986 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
VRK1Q99986 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
VRK1Q99986 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.82■■□□□ 1.08
VRK1Q99986 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VRK1Q99986 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
VRK1Q99986 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.81■■□□□ 1.08
VRK1Q99986 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VRK1Q99986 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VRK1Q99986 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
VRK1Q99986 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VRK1Q99986 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.8■■□□□ 1.08
VRK1Q99986 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.8■■□□□ 1.08
VRK1Q99986 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VRK1Q99986 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
VRK1Q99986 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
VRK1Q99986 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
VRK1Q99986 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.78■■□□□ 1.08
VRK1Q99986 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
VRK1Q99986 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VRK1Q99986 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VRK1Q99986 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.78■■□□□ 1.08
VRK1Q99986 AC110285.7-201ENST00000624417 1536 ntBASIC21.78■■□□□ 1.08
VRK1Q99986 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VRK1Q99986 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
VRK1Q99986 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
VRK1Q99986 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VRK1Q99986 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
VRK1Q99986 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.77■■□□□ 1.08
VRK1Q99986 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VRK1Q99986 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.77■■□□□ 1.08
VRK1Q99986 AC008813.1-201ENST00000536597 885 ntBASIC21.77■■□□□ 1.08
VRK1Q99986 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VRK1Q99986 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
VRK1Q99986 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VRK1Q99986 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.77■■□□□ 1.07
VRK1Q99986 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.76■■□□□ 1.07
VRK1Q99986 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VRK1Q99986 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VRK1Q99986 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VRK1Q99986 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
VRK1Q99986 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
VRK1Q99986 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms