Protein–RNA interactions for Protein: Q8WTV0

SCARB1, Scavenger receptor class B member 1, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1Q8WTV0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SCARB1Q8WTV0 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SCARB1Q8WTV0 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
SCARB1Q8WTV0 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SCARB1Q8WTV0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SCARB1Q8WTV0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SCARB1Q8WTV0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SCARB1Q8WTV0 LINC01003-201ENST00000564834 1764 ntBASIC20.88■□□□□ 0.93
SCARB1Q8WTV0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCARB1Q8WTV0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCARB1Q8WTV0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCARB1Q8WTV0 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SCARB1Q8WTV0 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCARB1Q8WTV0 SETD8P1-201ENST00000623146 1180 ntBASIC20.87■□□□□ 0.93
SCARB1Q8WTV0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SCARB1Q8WTV0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SCARB1Q8WTV0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCARB1Q8WTV0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCARB1Q8WTV0 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCARB1Q8WTV0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SCARB1Q8WTV0 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCARB1Q8WTV0 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCARB1Q8WTV0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCARB1Q8WTV0 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SCARB1Q8WTV0 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCARB1Q8WTV0 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCARB1Q8WTV0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.84■□□□□ 0.93
SCARB1Q8WTV0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCARB1Q8WTV0 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCARB1Q8WTV0 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.84■□□□□ 0.93
SCARB1Q8WTV0 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SCARB1Q8WTV0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCARB1Q8WTV0 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SCARB1Q8WTV0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SCARB1Q8WTV0 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCARB1Q8WTV0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SCARB1Q8WTV0 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SCARB1Q8WTV0 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCARB1Q8WTV0 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.82■□□□□ 0.92
SCARB1Q8WTV0 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SCARB1Q8WTV0 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCARB1Q8WTV0 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCARB1Q8WTV0 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SCARB1Q8WTV0 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SCARB1Q8WTV0 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.81■□□□□ 0.92
SCARB1Q8WTV0 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCARB1Q8WTV0 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCARB1Q8WTV0 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCARB1Q8WTV0 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCARB1Q8WTV0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCARB1Q8WTV0 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.8■□□□□ 0.92
SCARB1Q8WTV0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.8■□□□□ 0.92
SCARB1Q8WTV0 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.92
SCARB1Q8WTV0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.8■□□□□ 0.92
SCARB1Q8WTV0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCARB1Q8WTV0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCARB1Q8WTV0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCARB1Q8WTV0 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCARB1Q8WTV0 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.79■□□□□ 0.92
SCARB1Q8WTV0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SCARB1Q8WTV0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.78■□□□□ 0.92
SCARB1Q8WTV0 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCARB1Q8WTV0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SCARB1Q8WTV0 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCARB1Q8WTV0 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SCARB1Q8WTV0 AC133561.1-201ENST00000568600 2415 ntBASIC20.78■□□□□ 0.92
SCARB1Q8WTV0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCARB1Q8WTV0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCARB1Q8WTV0 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.77■□□□□ 0.92
SCARB1Q8WTV0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.77■□□□□ 0.92
SCARB1Q8WTV0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCARB1Q8WTV0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SCARB1Q8WTV0 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.76■□□□□ 0.91
SCARB1Q8WTV0 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCARB1Q8WTV0 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SCARB1Q8WTV0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCARB1Q8WTV0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCARB1Q8WTV0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCARB1Q8WTV0 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCARB1Q8WTV0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.75■□□□□ 0.91
SCARB1Q8WTV0 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.75■□□□□ 0.91
SCARB1Q8WTV0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCARB1Q8WTV0 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SCARB1Q8WTV0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.75■□□□□ 0.91
SCARB1Q8WTV0 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCARB1Q8WTV0 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCARB1Q8WTV0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCARB1Q8WTV0 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCARB1Q8WTV0 AC012676.1-201ENST00000574705 1949 ntBASIC20.74■□□□□ 0.91
SCARB1Q8WTV0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCARB1Q8WTV0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCARB1Q8WTV0 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SCARB1Q8WTV0 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCARB1Q8WTV0 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCARB1Q8WTV0 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCARB1Q8WTV0 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCARB1Q8WTV0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCARB1Q8WTV0 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.73■□□□□ 0.91
SCARB1Q8WTV0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCARB1Q8WTV0 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 229.3 ms