Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC35.87■■■■□ 3.33
XRN1Q8IZH2 AL035685.1-201ENST00000636663 812 ntBASIC35.87■■■■□ 3.33
XRN1Q8IZH2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
XRN1Q8IZH2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
XRN1Q8IZH2 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC35.86■■■■□ 3.33
XRN1Q8IZH2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC35.86■■■■□ 3.33
XRN1Q8IZH2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC35.86■■■■□ 3.33
XRN1Q8IZH2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC35.86■■■■□ 3.33
XRN1Q8IZH2 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
XRN1Q8IZH2 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
XRN1Q8IZH2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC35.85■■■■□ 3.33
XRN1Q8IZH2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC35.85■■■■□ 3.33
XRN1Q8IZH2 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC35.85■■■■□ 3.33
XRN1Q8IZH2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC35.85■■■■□ 3.33
XRN1Q8IZH2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
XRN1Q8IZH2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC35.84■■■■□ 3.33
XRN1Q8IZH2 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC35.84■■■■□ 3.33
XRN1Q8IZH2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC35.84■■■■□ 3.33
XRN1Q8IZH2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC35.84■■■■□ 3.33
XRN1Q8IZH2 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC35.83■■■■□ 3.33
XRN1Q8IZH2 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC35.83■■■■□ 3.33
XRN1Q8IZH2 TRIR-205ENST00000592273 783 ntTSL 3 BASIC35.83■■■■□ 3.33
XRN1Q8IZH2 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
XRN1Q8IZH2 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.32
XRN1Q8IZH2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC35.82■■■■□ 3.32
XRN1Q8IZH2 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC35.82■■■■□ 3.32
XRN1Q8IZH2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
XRN1Q8IZH2 REST-210ENST00000638187 1334 ntTSL 5 BASIC35.81■■■■□ 3.32
XRN1Q8IZH2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
XRN1Q8IZH2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
XRN1Q8IZH2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC35.8■■■■□ 3.32
XRN1Q8IZH2 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC35.79■■■■□ 3.32
XRN1Q8IZH2 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC35.77■■■■□ 3.32
XRN1Q8IZH2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC35.76■■■■□ 3.31
XRN1Q8IZH2 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC35.76■■■■□ 3.31
XRN1Q8IZH2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.31
XRN1Q8IZH2 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC35.75■■■■□ 3.31
XRN1Q8IZH2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC35.75■■■■□ 3.31
XRN1Q8IZH2 AC025884.2-201ENST00000553429 711 ntBASIC35.75■■■■□ 3.31
XRN1Q8IZH2 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC35.75■■■■□ 3.31
XRN1Q8IZH2 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
XRN1Q8IZH2 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC35.74■■■■□ 3.31
XRN1Q8IZH2 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC35.74■■■■□ 3.31
XRN1Q8IZH2 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC35.74■■■■□ 3.31
XRN1Q8IZH2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC35.73■■■■□ 3.31
XRN1Q8IZH2 AC133552.2-201ENST00000619106 1032 ntBASIC35.73■■■■□ 3.31
XRN1Q8IZH2 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC35.73■■■■□ 3.31
XRN1Q8IZH2 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC35.73■■■■□ 3.31
XRN1Q8IZH2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC35.72■■■■□ 3.31
XRN1Q8IZH2 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC35.71■■■■□ 3.31
XRN1Q8IZH2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
XRN1Q8IZH2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC35.7■■■■□ 3.31
XRN1Q8IZH2 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
XRN1Q8IZH2 DUX4L9-201ENST00000449051 1259 ntBASIC35.7■■■■□ 3.31
XRN1Q8IZH2 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC35.7■■■■□ 3.31
XRN1Q8IZH2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC35.7■■■■□ 3.31
XRN1Q8IZH2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC35.69■■■■□ 3.3
XRN1Q8IZH2 DUX4L18-201ENST00000553347 1267 ntBASIC35.69■■■■□ 3.3
XRN1Q8IZH2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
XRN1Q8IZH2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC35.67■■■■□ 3.3
XRN1Q8IZH2 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
XRN1Q8IZH2 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC35.66■■■■□ 3.3
XRN1Q8IZH2 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC35.66■■■■□ 3.3
XRN1Q8IZH2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC35.66■■■■□ 3.3
XRN1Q8IZH2 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
XRN1Q8IZH2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
XRN1Q8IZH2 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
XRN1Q8IZH2 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC35.65■■■■□ 3.3
XRN1Q8IZH2 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC35.64■■■■□ 3.3
XRN1Q8IZH2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC35.64■■■■□ 3.3
XRN1Q8IZH2 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
XRN1Q8IZH2 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
XRN1Q8IZH2 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
XRN1Q8IZH2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC35.64■■■■□ 3.3
XRN1Q8IZH2 SPCS2P3-201ENST00000500401 656 ntBASIC35.63■■■■□ 3.29
XRN1Q8IZH2 AC026202.3-201ENST00000600805 1127 ntBASIC35.63■■■■□ 3.29
XRN1Q8IZH2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC35.63■■■■□ 3.29
XRN1Q8IZH2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
XRN1Q8IZH2 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
XRN1Q8IZH2 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC35.62■■■■□ 3.29
XRN1Q8IZH2 RAP2CP1-202ENST00000605179 643 ntBASIC35.62■■■■□ 3.29
XRN1Q8IZH2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC35.61■■■■□ 3.29
XRN1Q8IZH2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
XRN1Q8IZH2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC35.61■■■■□ 3.29
XRN1Q8IZH2 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC35.6■■■■□ 3.29
XRN1Q8IZH2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC35.6■■■■□ 3.29
XRN1Q8IZH2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC35.6■■■■□ 3.29
XRN1Q8IZH2 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
XRN1Q8IZH2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
XRN1Q8IZH2 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
XRN1Q8IZH2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC35.6■■■■□ 3.29
XRN1Q8IZH2 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
XRN1Q8IZH2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
XRN1Q8IZH2 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC35.58■■■■□ 3.29
XRN1Q8IZH2 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC35.57■■■■□ 3.28
XRN1Q8IZH2 AC009299.2-201ENST00000482477 511 ntBASIC35.57■■■■□ 3.28
XRN1Q8IZH2 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC35.57■■■■□ 3.28
XRN1Q8IZH2 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC35.57■■■■□ 3.28
XRN1Q8IZH2 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC35.56■■■■□ 3.28
XRN1Q8IZH2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC35.56■■■■□ 3.28
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms