Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSMD3Q7Z407 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC17.87■□□□□ 0.45
CSMD3Q7Z407 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSMD3Q7Z407 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CSMD3Q7Z407 AL592293.1-201ENST00000502889 1188 ntBASIC17.87■□□□□ 0.45
CSMD3Q7Z407 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC17.87■□□□□ 0.45
CSMD3Q7Z407 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CSMD3Q7Z407 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CSMD3Q7Z407 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC17.87■□□□□ 0.45
CSMD3Q7Z407 DUX4L9-201ENST00000449051 1259 ntBASIC17.87■□□□□ 0.45
CSMD3Q7Z407 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSMD3Q7Z407 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CSMD3Q7Z407 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
CSMD3Q7Z407 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CSMD3Q7Z407 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSMD3Q7Z407 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CSMD3Q7Z407 AC009299.2-201ENST00000482477 511 ntBASIC17.85■□□□□ 0.45
CSMD3Q7Z407 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSMD3Q7Z407 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CSMD3Q7Z407 DUX4L18-201ENST00000553347 1267 ntBASIC17.85■□□□□ 0.45
CSMD3Q7Z407 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.84■□□□□ 0.45
CSMD3Q7Z407 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSMD3Q7Z407 ECEL1P2-201ENST00000461596 1295 ntBASIC17.84■□□□□ 0.45
CSMD3Q7Z407 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CSMD3Q7Z407 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSMD3Q7Z407 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CSMD3Q7Z407 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.84■□□□□ 0.45
CSMD3Q7Z407 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSMD3Q7Z407 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.83■□□□□ 0.44
CSMD3Q7Z407 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSMD3Q7Z407 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSMD3Q7Z407 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSMD3Q7Z407 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CSMD3Q7Z407 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CSMD3Q7Z407 AC009831.1-201ENST00000580420 1582 ntBASIC17.82■□□□□ 0.44
CSMD3Q7Z407 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC17.82■□□□□ 0.44
CSMD3Q7Z407 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSMD3Q7Z407 KRT8P33-201ENST00000508125 1423 ntBASIC17.82■□□□□ 0.44
CSMD3Q7Z407 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CSMD3Q7Z407 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.82■□□□□ 0.44
CSMD3Q7Z407 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CSMD3Q7Z407 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSMD3Q7Z407 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSMD3Q7Z407 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSMD3Q7Z407 MIR935-201ENST00000401179 91 ntBASIC17.81■□□□□ 0.44
CSMD3Q7Z407 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CSMD3Q7Z407 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.81■□□□□ 0.44
CSMD3Q7Z407 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CSMD3Q7Z407 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSMD3Q7Z407 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CSMD3Q7Z407 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.8■□□□□ 0.44
CSMD3Q7Z407 AC131212.1-201ENST00000613771 668 ntBASIC17.8■□□□□ 0.44
CSMD3Q7Z407 AC133552.2-201ENST00000619106 1032 ntBASIC17.8■□□□□ 0.44
CSMD3Q7Z407 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSMD3Q7Z407 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSMD3Q7Z407 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CSMD3Q7Z407 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.79■□□□□ 0.44
CSMD3Q7Z407 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CSMD3Q7Z407 AC025884.2-201ENST00000553429 711 ntBASIC17.79■□□□□ 0.44
CSMD3Q7Z407 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CSMD3Q7Z407 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
CSMD3Q7Z407 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC17.78■□□□□ 0.44
CSMD3Q7Z407 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CSMD3Q7Z407 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.78■□□□□ 0.44
CSMD3Q7Z407 RAP2CP1-202ENST00000605179 643 ntBASIC17.78■□□□□ 0.44
CSMD3Q7Z407 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CSMD3Q7Z407 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC17.78■□□□□ 0.44
CSMD3Q7Z407 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.77■□□□□ 0.44
CSMD3Q7Z407 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CSMD3Q7Z407 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSMD3Q7Z407 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSMD3Q7Z407 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.76■□□□□ 0.43
CSMD3Q7Z407 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.76■□□□□ 0.43
CSMD3Q7Z407 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSMD3Q7Z407 THA1P-201ENST00000590384 1145 ntBASIC17.76■□□□□ 0.43
CSMD3Q7Z407 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.75■□□□□ 0.43
CSMD3Q7Z407 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CSMD3Q7Z407 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.75■□□□□ 0.43
CSMD3Q7Z407 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.74■□□□□ 0.43
CSMD3Q7Z407 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CSMD3Q7Z407 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSMD3Q7Z407 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CSMD3Q7Z407 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSMD3Q7Z407 SPCS2P3-201ENST00000500401 656 ntBASIC17.74■□□□□ 0.43
CSMD3Q7Z407 AC026202.3-201ENST00000600805 1127 ntBASIC17.74■□□□□ 0.43
CSMD3Q7Z407 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.74■□□□□ 0.43
CSMD3Q7Z407 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.74■□□□□ 0.43
CSMD3Q7Z407 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSMD3Q7Z407 GUSBP5-201ENST00000418136 578 ntBASIC17.74■□□□□ 0.43
CSMD3Q7Z407 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.74■□□□□ 0.43
CSMD3Q7Z407 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSMD3Q7Z407 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.73■□□□□ 0.43
CSMD3Q7Z407 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSMD3Q7Z407 AC103834.1-201ENST00000520383 144 ntBASIC17.73■□□□□ 0.43
CSMD3Q7Z407 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
CSMD3Q7Z407 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.73■□□□□ 0.43
CSMD3Q7Z407 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSMD3Q7Z407 RP9P-202ENST00000450133 1212 ntBASIC17.73■□□□□ 0.43
CSMD3Q7Z407 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSMD3Q7Z407 AC010980.1-201ENST00000587192 1142 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms