Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
LCA10Q71F78 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LCA10Q71F78 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
LCA10Q71F78 ZNRF2P1-201ENST00000441407 443 ntBASIC13.41□□□□□ -0.26
LCA10Q71F78 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC13.41□□□□□ -0.26
LCA10Q71F78 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LCA10Q71F78 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
LCA10Q71F78 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LCA10Q71F78 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LCA10Q71F78 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC13.4□□□□□ -0.26
LCA10Q71F78 TMEM202-AS1-202ENST00000565181 2325 ntBASIC13.4□□□□□ -0.26
LCA10Q71F78 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC13.4□□□□□ -0.26
LCA10Q71F78 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LCA10Q71F78 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LCA10Q71F78 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LCA10Q71F78 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LCA10Q71F78 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC13.39□□□□□ -0.27
LCA10Q71F78 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LCA10Q71F78 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LCA10Q71F78 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LCA10Q71F78 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
LCA10Q71F78 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
LCA10Q71F78 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
LCA10Q71F78 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LCA10Q71F78 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LCA10Q71F78 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LCA10Q71F78 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LCA10Q71F78 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LCA10Q71F78 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LCA10Q71F78 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LCA10Q71F78 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LCA10Q71F78 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC13.38□□□□□ -0.27
LCA10Q71F78 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC13.38□□□□□ -0.27
LCA10Q71F78 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LCA10Q71F78 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LCA10Q71F78 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LCA10Q71F78 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LCA10Q71F78 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LCA10Q71F78 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LCA10Q71F78 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LCA10Q71F78 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC13.37□□□□□ -0.27
LCA10Q71F78 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LCA10Q71F78 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC13.37□□□□□ -0.27
LCA10Q71F78 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LCA10Q71F78 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LCA10Q71F78 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LCA10Q71F78 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LCA10Q71F78 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
LCA10Q71F78 AC020928.2-201ENST00000588717 2197 ntBASIC13.37□□□□□ -0.27
LCA10Q71F78 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LCA10Q71F78 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LCA10Q71F78 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LCA10Q71F78 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LCA10Q71F78 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LCA10Q71F78 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LCA10Q71F78 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC13.36□□□□□ -0.27
LCA10Q71F78 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LCA10Q71F78 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCA10Q71F78 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCA10Q71F78 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCA10Q71F78 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LCA10Q71F78 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
LCA10Q71F78 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCA10Q71F78 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LCA10Q71F78 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LCA10Q71F78 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LCA10Q71F78 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LCA10Q71F78 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC13.34□□□□□ -0.27
LCA10Q71F78 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LCA10Q71F78 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC13.34□□□□□ -0.27
LCA10Q71F78 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
LCA10Q71F78 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LCA10Q71F78 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LCA10Q71F78 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LCA10Q71F78 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LCA10Q71F78 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
LCA10Q71F78 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LCA10Q71F78 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC13.33□□□□□ -0.28
LCA10Q71F78 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LCA10Q71F78 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LCA10Q71F78 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LCA10Q71F78 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LCA10Q71F78 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC13.32□□□□□ -0.28
LCA10Q71F78 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LCA10Q71F78 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LCA10Q71F78 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LCA10Q71F78 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LCA10Q71F78 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LCA10Q71F78 DYNLL1-208ENST00000550178 581 ntBASIC13.31□□□□□ -0.28
LCA10Q71F78 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LCA10Q71F78 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LCA10Q71F78 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LCA10Q71F78 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LCA10Q71F78 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LCA10Q71F78 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LCA10Q71F78 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LCA10Q71F78 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC13.3□□□□□ -0.28
LCA10Q71F78 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC13.3□□□□□ -0.28
LCA10Q71F78 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LCA10Q71F78 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms