Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
NPHS1O60500 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
NPHS1O60500 AL449106.1-201ENST00000608517 1980 ntBASIC24.58■■□□□ 1.53
NPHS1O60500 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
NPHS1O60500 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.52
NPHS1O60500 AC091060.1-201ENST00000623524 1766 ntBASIC24.57■■□□□ 1.52
NPHS1O60500 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
NPHS1O60500 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NPHS1O60500 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
NPHS1O60500 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
NPHS1O60500 SUZ12P1-203ENST00000578195 985 ntBASIC24.56■■□□□ 1.52
NPHS1O60500 MIR6090-201ENST00000622481 60 ntBASIC24.56■■□□□ 1.52
NPHS1O60500 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NPHS1O60500 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
NPHS1O60500 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NPHS1O60500 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
NPHS1O60500 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
NPHS1O60500 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
NPHS1O60500 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
NPHS1O60500 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
NPHS1O60500 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
NPHS1O60500 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.53■■□□□ 1.52
NPHS1O60500 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
NPHS1O60500 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
NPHS1O60500 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
NPHS1O60500 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.53■■□□□ 1.52
NPHS1O60500 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.53■■□□□ 1.52
NPHS1O60500 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
NPHS1O60500 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
NPHS1O60500 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
NPHS1O60500 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.51■■□□□ 1.51
NPHS1O60500 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
NPHS1O60500 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
NPHS1O60500 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
NPHS1O60500 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
NPHS1O60500 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
NPHS1O60500 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NPHS1O60500 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
NPHS1O60500 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
NPHS1O60500 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.49■■□□□ 1.51
NPHS1O60500 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
NPHS1O60500 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
NPHS1O60500 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC24.48■■□□□ 1.51
NPHS1O60500 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
NPHS1O60500 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.47■■□□□ 1.51
NPHS1O60500 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
NPHS1O60500 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
NPHS1O60500 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.46■■□□□ 1.51
NPHS1O60500 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
NPHS1O60500 DUX4L28-201ENST00000623687 678 ntBASIC24.46■■□□□ 1.51
NPHS1O60500 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
NPHS1O60500 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
NPHS1O60500 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
NPHS1O60500 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.45■■□□□ 1.5
NPHS1O60500 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
NPHS1O60500 AC145676.1-201ENST00000514988 2004 ntBASIC24.44■■□□□ 1.5
NPHS1O60500 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
NPHS1O60500 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC24.44■■□□□ 1.5
NPHS1O60500 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
NPHS1O60500 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
NPHS1O60500 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
NPHS1O60500 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.43■■□□□ 1.5
NPHS1O60500 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.43■■□□□ 1.5
NPHS1O60500 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
NPHS1O60500 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.42■■□□□ 1.5
NPHS1O60500 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
NPHS1O60500 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NPHS1O60500 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
NPHS1O60500 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NPHS1O60500 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.4■■□□□ 1.5
NPHS1O60500 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
NPHS1O60500 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.4■■□□□ 1.5
NPHS1O60500 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC24.4■■□□□ 1.5
NPHS1O60500 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.4■■□□□ 1.5
NPHS1O60500 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
NPHS1O60500 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NPHS1O60500 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
NPHS1O60500 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.39■■□□□ 1.5
NPHS1O60500 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.39■■□□□ 1.5
NPHS1O60500 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.39■■□□□ 1.5
NPHS1O60500 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.39■■□□□ 1.49
NPHS1O60500 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
NPHS1O60500 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.38■■□□□ 1.49
NPHS1O60500 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.38■■□□□ 1.49
NPHS1O60500 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
NPHS1O60500 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
NPHS1O60500 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.38■■□□□ 1.49
NPHS1O60500 AC135731.1-201ENST00000569415 2548 ntBASIC24.38■■□□□ 1.49
NPHS1O60500 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
NPHS1O60500 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.37■■□□□ 1.49
NPHS1O60500 MIR3665-201ENST00000578708 105 ntBASIC24.37■■□□□ 1.49
NPHS1O60500 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.37■■□□□ 1.49
NPHS1O60500 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
NPHS1O60500 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.36■■□□□ 1.49
NPHS1O60500 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
NPHS1O60500 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
NPHS1O60500 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
NPHS1O60500 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
NPHS1O60500 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.33■■□□□ 1.49
NPHS1O60500 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms