Protein–RNA interactions for Protein: H3BR10

SMLR1, Small leucine-rich protein 1, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMLR1H3BR10 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SMLR1H3BR10 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.29■■□□□ 1
SMLR1H3BR10 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SMLR1H3BR10 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SMLR1H3BR10 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SMLR1H3BR10 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SMLR1H3BR10 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SMLR1H3BR10 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
SMLR1H3BR10 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.29■■□□□ 1
SMLR1H3BR10 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.28■■□□□ 1
SMLR1H3BR10 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMLR1H3BR10 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.28■■□□□ 1
SMLR1H3BR10 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
SMLR1H3BR10 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.27■■□□□ 1
SMLR1H3BR10 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SMLR1H3BR10 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.27■■□□□ 1
SMLR1H3BR10 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SMLR1H3BR10 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.27■■□□□ 1
SMLR1H3BR10 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMLR1H3BR10 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SMLR1H3BR10 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMLR1H3BR10 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
SMLR1H3BR10 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SMLR1H3BR10 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.24■□□□□ 0.99
SMLR1H3BR10 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.24■□□□□ 0.99
SMLR1H3BR10 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMLR1H3BR10 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMLR1H3BR10 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMLR1H3BR10 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMLR1H3BR10 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMLR1H3BR10 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMLR1H3BR10 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMLR1H3BR10 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.22■□□□□ 0.99
SMLR1H3BR10 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMLR1H3BR10 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
SMLR1H3BR10 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
SMLR1H3BR10 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMLR1H3BR10 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMLR1H3BR10 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMLR1H3BR10 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMLR1H3BR10 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMLR1H3BR10 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.21■□□□□ 0.99
SMLR1H3BR10 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SMLR1H3BR10 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMLR1H3BR10 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMLR1H3BR10 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMLR1H3BR10 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMLR1H3BR10 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
SMLR1H3BR10 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
SMLR1H3BR10 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMLR1H3BR10 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMLR1H3BR10 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMLR1H3BR10 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMLR1H3BR10 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.19■□□□□ 0.98
SMLR1H3BR10 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.19■□□□□ 0.98
SMLR1H3BR10 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.19■□□□□ 0.98
SMLR1H3BR10 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMLR1H3BR10 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMLR1H3BR10 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMLR1H3BR10 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMLR1H3BR10 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMLR1H3BR10 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMLR1H3BR10 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMLR1H3BR10 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMLR1H3BR10 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
SMLR1H3BR10 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMLR1H3BR10 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.17■□□□□ 0.98
SMLR1H3BR10 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SMLR1H3BR10 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMLR1H3BR10 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SMLR1H3BR10 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.16■□□□□ 0.98
SMLR1H3BR10 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMLR1H3BR10 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMLR1H3BR10 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMLR1H3BR10 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMLR1H3BR10 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.15■□□□□ 0.98
SMLR1H3BR10 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.15■□□□□ 0.98
SMLR1H3BR10 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMLR1H3BR10 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.15■□□□□ 0.98
SMLR1H3BR10 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.15■□□□□ 0.98
SMLR1H3BR10 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.14■□□□□ 0.97
SMLR1H3BR10 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
SMLR1H3BR10 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
SMLR1H3BR10 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.13■□□□□ 0.97
SMLR1H3BR10 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SMLR1H3BR10 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMLR1H3BR10 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMLR1H3BR10 ERN1-208ENST00000606895 2068 ntBASIC21.12■□□□□ 0.97
SMLR1H3BR10 DUSP8P4-201ENST00000399538 1761 ntBASIC21.12■□□□□ 0.97
SMLR1H3BR10 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMLR1H3BR10 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMLR1H3BR10 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SMLR1H3BR10 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMLR1H3BR10 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC21.11■□□□□ 0.97
SMLR1H3BR10 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SMLR1H3BR10 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMLR1H3BR10 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMLR1H3BR10 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SMLR1H3BR10 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SMLR1H3BR10 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms