Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
NPIPB4C9JG80 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
NPIPB4C9JG80 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NPIPB4C9JG80 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
NPIPB4C9JG80 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
NPIPB4C9JG80 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NPIPB4C9JG80 MLEC-202ENST00000412616 841 ntTSL 3 BASIC22.4■■□□□ 1.18
NPIPB4C9JG80 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC22.4■■□□□ 1.18
NPIPB4C9JG80 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
NPIPB4C9JG80 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NPIPB4C9JG80 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.17
NPIPB4C9JG80 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
NPIPB4C9JG80 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.39■■□□□ 1.17
NPIPB4C9JG80 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
NPIPB4C9JG80 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
NPIPB4C9JG80 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NPIPB4C9JG80 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.38■■□□□ 1.17
NPIPB4C9JG80 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.38■■□□□ 1.17
NPIPB4C9JG80 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NPIPB4C9JG80 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NPIPB4C9JG80 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NPIPB4C9JG80 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
NPIPB4C9JG80 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.36■■□□□ 1.17
NPIPB4C9JG80 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
NPIPB4C9JG80 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.36■■□□□ 1.17
NPIPB4C9JG80 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC22.36■■□□□ 1.17
NPIPB4C9JG80 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.36■■□□□ 1.17
NPIPB4C9JG80 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
NPIPB4C9JG80 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
NPIPB4C9JG80 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
NPIPB4C9JG80 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NPIPB4C9JG80 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
NPIPB4C9JG80 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
NPIPB4C9JG80 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NPIPB4C9JG80 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
NPIPB4C9JG80 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.34■■□□□ 1.17
NPIPB4C9JG80 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
NPIPB4C9JG80 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
NPIPB4C9JG80 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
NPIPB4C9JG80 DUX4L13-201ENST00000554103 1267 ntBASIC22.33■■□□□ 1.17
NPIPB4C9JG80 DUX4L15-201ENST00000611059 1267 ntBASIC22.33■■□□□ 1.17
NPIPB4C9JG80 DUX4L23-201ENST00000615195 1269 ntBASIC22.33■■□□□ 1.17
NPIPB4C9JG80 DUX4L24-201ENST00000617576 1269 ntBASIC22.33■■□□□ 1.17
NPIPB4C9JG80 DUX4L22-201ENST00000618238 1269 ntBASIC22.33■■□□□ 1.17
NPIPB4C9JG80 DUX4L20-201ENST00000619712 1269 ntBASIC22.33■■□□□ 1.17
NPIPB4C9JG80 DUX4L21-201ENST00000622058 1269 ntBASIC22.33■■□□□ 1.17
NPIPB4C9JG80 DUX4L10-201ENST00000622460 1267 ntBASIC22.33■■□□□ 1.17
NPIPB4C9JG80 DUX4L25-201ENST00000624915 1269 ntBASIC22.33■■□□□ 1.17
NPIPB4C9JG80 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NPIPB4C9JG80 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
NPIPB4C9JG80 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NPIPB4C9JG80 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
NPIPB4C9JG80 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
NPIPB4C9JG80 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
NPIPB4C9JG80 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NPIPB4C9JG80 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NPIPB4C9JG80 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.3■■□□□ 1.16
NPIPB4C9JG80 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
NPIPB4C9JG80 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NPIPB4C9JG80 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NPIPB4C9JG80 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.29■■□□□ 1.16
NPIPB4C9JG80 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
NPIPB4C9JG80 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.28■■□□□ 1.16
NPIPB4C9JG80 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.28■■□□□ 1.16
NPIPB4C9JG80 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.28■■□□□ 1.16
NPIPB4C9JG80 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
NPIPB4C9JG80 DUX4L11-201ENST00000611504 1267 ntBASIC22.28■■□□□ 1.16
NPIPB4C9JG80 DUX4L12-201ENST00000614593 1267 ntBASIC22.28■■□□□ 1.16
NPIPB4C9JG80 DUX4L14-201ENST00000621227 1267 ntBASIC22.28■■□□□ 1.16
NPIPB4C9JG80 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NPIPB4C9JG80 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NPIPB4C9JG80 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.27■■□□□ 1.16
NPIPB4C9JG80 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
NPIPB4C9JG80 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NPIPB4C9JG80 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC22.27■■□□□ 1.16
NPIPB4C9JG80 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
NPIPB4C9JG80 AC008813.1-201ENST00000536597 885 ntBASIC22.26■■□□□ 1.15
NPIPB4C9JG80 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NPIPB4C9JG80 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.26■■□□□ 1.15
NPIPB4C9JG80 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NPIPB4C9JG80 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.25■■□□□ 1.15
NPIPB4C9JG80 ZNRF2P2-203ENST00000454624 420 ntBASIC22.25■■□□□ 1.15
NPIPB4C9JG80 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.25■■□□□ 1.15
NPIPB4C9JG80 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NPIPB4C9JG80 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.25■■□□□ 1.15
NPIPB4C9JG80 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
NPIPB4C9JG80 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NPIPB4C9JG80 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NPIPB4C9JG80 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NPIPB4C9JG80 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NPIPB4C9JG80 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.23■■□□□ 1.15
NPIPB4C9JG80 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NPIPB4C9JG80 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
NPIPB4C9JG80 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
NPIPB4C9JG80 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.22■■□□□ 1.15
NPIPB4C9JG80 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NPIPB4C9JG80 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
NPIPB4C9JG80 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NPIPB4C9JG80 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.2■■□□□ 1.14
NPIPB4C9JG80 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms