Protein–RNA interactions for Protein: A8MTJ6

FOXI3, Forkhead box protein I3, humanhuman

Predicted RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXI3A8MTJ6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.28■■□□□ 1
FOXI3A8MTJ6 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
FOXI3A8MTJ6 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FOXI3A8MTJ6 LINC00273-201ENST00000539813 1452 ntBASIC21.27■■□□□ 1
FOXI3A8MTJ6 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
FOXI3A8MTJ6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.27■■□□□ 1
FOXI3A8MTJ6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.27■■□□□ 1
FOXI3A8MTJ6 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.26■□□□□ 0.99
FOXI3A8MTJ6 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXI3A8MTJ6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FOXI3A8MTJ6 AC005559.1-201ENST00000589661 871 ntBASIC21.26■□□□□ 0.99
FOXI3A8MTJ6 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXI3A8MTJ6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
FOXI3A8MTJ6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
FOXI3A8MTJ6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXI3A8MTJ6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.24■□□□□ 0.99
FOXI3A8MTJ6 AC108673.1-201ENST00000510422 1159 ntBASIC21.24■□□□□ 0.99
FOXI3A8MTJ6 SUZ12P1-203ENST00000578195 985 ntBASIC21.24■□□□□ 0.99
FOXI3A8MTJ6 MIR6090-201ENST00000622481 60 ntBASIC21.24■□□□□ 0.99
FOXI3A8MTJ6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.24■□□□□ 0.99
FOXI3A8MTJ6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.24■□□□□ 0.99
FOXI3A8MTJ6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXI3A8MTJ6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXI3A8MTJ6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXI3A8MTJ6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
FOXI3A8MTJ6 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
FOXI3A8MTJ6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
FOXI3A8MTJ6 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXI3A8MTJ6 AC135731.1-201ENST00000569415 2548 ntBASIC21.23■□□□□ 0.99
FOXI3A8MTJ6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXI3A8MTJ6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
FOXI3A8MTJ6 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
FOXI3A8MTJ6 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.23■□□□□ 0.99
FOXI3A8MTJ6 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXI3A8MTJ6 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXI3A8MTJ6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
FOXI3A8MTJ6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXI3A8MTJ6 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
FOXI3A8MTJ6 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
FOXI3A8MTJ6 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
FOXI3A8MTJ6 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXI3A8MTJ6 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.2■□□□□ 0.98
FOXI3A8MTJ6 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXI3A8MTJ6 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FOXI3A8MTJ6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FOXI3A8MTJ6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXI3A8MTJ6 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXI3A8MTJ6 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXI3A8MTJ6 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXI3A8MTJ6 AC145676.1-201ENST00000514988 2004 ntBASIC21.18■□□□□ 0.98
FOXI3A8MTJ6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXI3A8MTJ6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
FOXI3A8MTJ6 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.17■□□□□ 0.98
FOXI3A8MTJ6 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.17■□□□□ 0.98
FOXI3A8MTJ6 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXI3A8MTJ6 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.16■□□□□ 0.98
FOXI3A8MTJ6 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXI3A8MTJ6 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXI3A8MTJ6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXI3A8MTJ6 DUX4L28-201ENST00000623687 678 ntBASIC21.15■□□□□ 0.98
FOXI3A8MTJ6 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.15■□□□□ 0.98
FOXI3A8MTJ6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FOXI3A8MTJ6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FOXI3A8MTJ6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
FOXI3A8MTJ6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.13■□□□□ 0.97
FOXI3A8MTJ6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
FOXI3A8MTJ6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXI3A8MTJ6 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.13■□□□□ 0.97
FOXI3A8MTJ6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FOXI3A8MTJ6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.12■□□□□ 0.97
FOXI3A8MTJ6 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXI3A8MTJ6 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.12■□□□□ 0.97
FOXI3A8MTJ6 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXI3A8MTJ6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
FOXI3A8MTJ6 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXI3A8MTJ6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
FOXI3A8MTJ6 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.11■□□□□ 0.97
FOXI3A8MTJ6 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.11■□□□□ 0.97
FOXI3A8MTJ6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.11■□□□□ 0.97
FOXI3A8MTJ6 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.1■□□□□ 0.97
FOXI3A8MTJ6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXI3A8MTJ6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.1■□□□□ 0.97
FOXI3A8MTJ6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.1■□□□□ 0.97
FOXI3A8MTJ6 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXI3A8MTJ6 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXI3A8MTJ6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXI3A8MTJ6 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FOXI3A8MTJ6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.09■□□□□ 0.97
FOXI3A8MTJ6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.09■□□□□ 0.97
FOXI3A8MTJ6 DUSP8P4-201ENST00000399538 1761 ntBASIC21.09■□□□□ 0.97
FOXI3A8MTJ6 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FOXI3A8MTJ6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FOXI3A8MTJ6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FOXI3A8MTJ6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.08■□□□□ 0.97
FOXI3A8MTJ6 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FOXI3A8MTJ6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FOXI3A8MTJ6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.07■□□□□ 0.96
FOXI3A8MTJ6 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.07■□□□□ 0.96
FOXI3A8MTJ6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FOXI3A8MTJ6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms