Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.01■■□□□ 1.59
CCDC189A1A4V9 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.01■■□□□ 1.59
CCDC189A1A4V9 LINC00273-201ENST00000539813 1452 ntBASIC25.01■■□□□ 1.59
CCDC189A1A4V9 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
CCDC189A1A4V9 MIR6090-201ENST00000622481 60 ntBASIC25■■□□□ 1.59
CCDC189A1A4V9 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CCDC189A1A4V9 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CCDC189A1A4V9 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
CCDC189A1A4V9 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CCDC189A1A4V9 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CCDC189A1A4V9 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CCDC189A1A4V9 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.98■■□□□ 1.59
CCDC189A1A4V9 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
CCDC189A1A4V9 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.97■■□□□ 1.59
CCDC189A1A4V9 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CCDC189A1A4V9 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
CCDC189A1A4V9 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
CCDC189A1A4V9 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CCDC189A1A4V9 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CCDC189A1A4V9 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.95■■□□□ 1.58
CCDC189A1A4V9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.95■■□□□ 1.58
CCDC189A1A4V9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CCDC189A1A4V9 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
CCDC189A1A4V9 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CCDC189A1A4V9 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.94■■□□□ 1.58
CCDC189A1A4V9 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
CCDC189A1A4V9 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CCDC189A1A4V9 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CCDC189A1A4V9 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
CCDC189A1A4V9 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.93■■□□□ 1.58
CCDC189A1A4V9 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CCDC189A1A4V9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CCDC189A1A4V9 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.92■■□□□ 1.58
CCDC189A1A4V9 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CCDC189A1A4V9 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CCDC189A1A4V9 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CCDC189A1A4V9 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CCDC189A1A4V9 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.91■■□□□ 1.58
CCDC189A1A4V9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CCDC189A1A4V9 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CCDC189A1A4V9 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.91■■□□□ 1.58
CCDC189A1A4V9 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.91■■□□□ 1.58
CCDC189A1A4V9 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
CCDC189A1A4V9 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.9■■□□□ 1.58
CCDC189A1A4V9 WHAMMP2-203ENST00000563942 1603 ntBASIC24.9■■□□□ 1.58
CCDC189A1A4V9 AC018358.1-201ENST00000631079 1402 ntBASIC24.9■■□□□ 1.58
CCDC189A1A4V9 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CCDC189A1A4V9 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
CCDC189A1A4V9 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
CCDC189A1A4V9 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
CCDC189A1A4V9 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CCDC189A1A4V9 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.89■■□□□ 1.57
CCDC189A1A4V9 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.89■■□□□ 1.57
CCDC189A1A4V9 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CCDC189A1A4V9 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.88■■□□□ 1.57
CCDC189A1A4V9 RARA-203ENST00000394086 2008 ntTSL 2 BASIC24.88■■□□□ 1.57
CCDC189A1A4V9 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
CCDC189A1A4V9 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CCDC189A1A4V9 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.88■■□□□ 1.57
CCDC189A1A4V9 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CCDC189A1A4V9 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
CCDC189A1A4V9 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.87■■□□□ 1.57
CCDC189A1A4V9 AC087741.3-201ENST00000624270 1347 ntBASIC24.86■■□□□ 1.57
CCDC189A1A4V9 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CCDC189A1A4V9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.86■■□□□ 1.57
CCDC189A1A4V9 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.86■■□□□ 1.57
CCDC189A1A4V9 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CCDC189A1A4V9 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC24.85■■□□□ 1.57
CCDC189A1A4V9 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
CCDC189A1A4V9 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CCDC189A1A4V9 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
CCDC189A1A4V9 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CCDC189A1A4V9 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
CCDC189A1A4V9 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.82■■□□□ 1.56
CCDC189A1A4V9 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.82■■□□□ 1.56
CCDC189A1A4V9 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.82■■□□□ 1.56
CCDC189A1A4V9 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC24.81■■□□□ 1.56
CCDC189A1A4V9 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.81■■□□□ 1.56
CCDC189A1A4V9 AC044849.2-201ENST00000606596 710 ntBASIC24.81■■□□□ 1.56
CCDC189A1A4V9 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.81■■□□□ 1.56
CCDC189A1A4V9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CCDC189A1A4V9 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.8■■□□□ 1.56
CCDC189A1A4V9 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CCDC189A1A4V9 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
CCDC189A1A4V9 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CCDC189A1A4V9 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CCDC189A1A4V9 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
CCDC189A1A4V9 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.79■■□□□ 1.56
CCDC189A1A4V9 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CCDC189A1A4V9 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CCDC189A1A4V9 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
CCDC189A1A4V9 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CCDC189A1A4V9 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CCDC189A1A4V9 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
CCDC189A1A4V9 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CCDC189A1A4V9 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CCDC189A1A4V9 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CCDC189A1A4V9 AL162393.1-201ENST00000437852 946 ntBASIC24.78■■□□□ 1.56
CCDC189A1A4V9 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.78■■□□□ 1.56
CCDC189A1A4V9 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms