RNA–Protein interactions for RNA: YPR036W

VMA13, Transcript of Subunit H of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA13, Length 1,437 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA13YPR036W MTC1P47018 478 aaKnown RBP12.87□□□□□ -0.35
VMA13YPR036W FAP1P53971 965 aa12.71□□□□□ -0.38
VMA13YPR036W PRY3P47033 881 aa11.94□□□□□ -0.5
VMA13YPR036W AAD16Q02895 342 aa11.41□□□□□ -0.58
VMA13YPR036W PRI1P10363 409 aa11.34□□□□□ -0.59
VMA13YPR036W DRS1P32892 752 aaKnown RBP11.18□□□□□ -0.62
VMA13YPR036W HAA1Q12753 694 aaKnown RBP11.13□□□□□ -0.63
VMA13YPR036W YCK3P39962 524 aa11.04□□□□□ -0.64
VMA13YPR036W ISW2Q08773 1120 aa10.93□□□□□ -0.66
VMA13YPR036W RPG1P38249 964 aaKnown RBP10.81□□□□□ -0.68
VMA13YPR036W TSR3Q12094 313 aaKnown RBP10.69□□□□□ -0.7
VMA13YPR036W MON2P48563 1636 aaPredicted RBP10.55□□□□□ -0.72
VMA13YPR036W INO80P53115 1489 aa10.52□□□□□ -0.73
VMA13YPR036W MRPL32P25348 183 aa10.33□□□□□ -0.76
VMA13YPR036W YGL015CP33199 130 aa10.14□□□□□ -0.79
VMA13YPR036W DIP2Q12220 943 aaPredicted RBP10.11□□□□□ -0.79
VMA13YPR036W RSE1Q04693 1361 aaKnown RBP10.06□□□□□ -0.8
VMA13YPR036W DNA2P38859 1522 aa10.02□□□□□ -0.8
VMA13YPR036W REB1P21538 810 aa9.87□□□□□ -0.83
VMA13YPR036W RPL17AP05740 184 aaKnown RBP9.77□□□□□ -0.85
VMA13YPR036W RPL17BP46990 184 aaKnown RBP9.77□□□□□ -0.85
VMA13YPR036W KOG1P38873 1557 aa9.76□□□□□ -0.85
VMA13YPR036W SWR1Q05471 1514 aa9.71□□□□□ -0.86
VMA13YPR036W BUD31P25337 157 aaPredicted RBP9.64□□□□□ -0.87
VMA13YPR036W TFA1P36100 482 aa9.57□□□□□ -0.88
VMA13YPR036W CDC27P38042 758 aa9.55□□□□□ -0.88
VMA13YPR036W RQC2Q12532 1038 aaKnown RBP9.52□□□□□ -0.89
VMA13YPR036W SPA2P23201 1466 aaKnown RBP9.5□□□□□ -0.89
VMA13YPR036W UBP10P53874 792 aaPredicted RBP9.45□□□□□ -0.9
VMA13YPR036W AVT3P36062 692 aa9.42□□□□□ -0.9
VMA13YPR036W MAP2P38174 421 aaKnown RBP9.39□□□□□ -0.91
VMA13YPR036W BFR2Q06631 534 aaKnown RBP9.32□□□□□ -0.92
VMA13YPR036W YKR023WP36119 530 aaKnown RBP9.31□□□□□ -0.92
VMA13YPR036W TAF7Q05021 590 aa9.31□□□□□ -0.92
VMA13YPR036W TY1B-DR4Q07793 1604 aa9.28□□□□□ -0.92
VMA13YPR036W SGS1P35187 1447 aa9.27□□□□□ -0.93
VMA13YPR036W TCB3Q03640 1545 aaKnown RBP9.19□□□□□ -0.94
VMA13YPR036W SPT21P35209 758 aa9.18□□□□□ -0.94
VMA13YPR036W HOP09932 586 aa9.17□□□□□ -0.94
VMA13YPR036W SIS1P25294 352 aaKnown RBP9.17□□□□□ -0.94
VMA13YPR036W DCD1P06773 312 aa9.15□□□□□ -0.94
VMA13YPR036W TIF4632P39936 914 aaKnown RBP9.14□□□□□ -0.95
VMA13YPR036W TFC8Q12308 588 aa9.14□□□□□ -0.95
VMA13YPR036W UBP9P39967 754 aa9.12□□□□□ -0.95
VMA13YPR036W SCY1P53009 804 aa9.08□□□□□ -0.96
VMA13YPR036W MIF2P35201 549 aa9.05□□□□□ -0.96
VMA13YPR036W TGL3P40308 642 aa9.05□□□□□ -0.96
VMA13YPR036W SLX5P32828 619 aaKnown RBP9.03□□□□□ -0.96
VMA13YPR036W ECM5Q03214 1411 aa8.93□□□□□ -0.98
VMA13YPR036W SSN2P38931 1420 aa8.85□□□□□ -0.99
VMA13YPR036W REV3P14284 1504 aa8.81□□□□□ -1
VMA13YPR036W BCH2P36122 765 aa8.8□□□□□ -1
VMA13YPR036W HSL1P34244 1518 aa8.78□□□□□ -1
VMA13YPR036W SPT6P23615 1451 aaKnown RBP8.78□□□□□ -1
VMA13YPR036W MDS3P53094 1487 aa8.76□□□□□ -1.01
VMA13YPR036W BUD4P47136 1447 aa8.75□□□□□ -1.01
VMA13YPR036W THO2P53552 1597 aaKnown RBP8.74□□□□□ -1.01
VMA13YPR036W YFR006WP43590 535 aa8.7□□□□□ -1.02
VMA13YPR036W RIM101P33400 625 aa8.69□□□□□ -1.02
VMA13YPR036W PEP1P32319 1579 aa8.58□□□□□ -1.04
VMA13YPR036W YBL029C-AQ3E756 94 aa8.58□□□□□ -1.04
VMA13YPR036W BPT1P14772 1559 aa8.58□□□□□ -1.04
VMA13YPR036W EPS1P40557 701 aa8.54□□□□□ -1.04
VMA13YPR036W HIR3P47171 1648 aa8.54□□□□□ -1.04
VMA13YPR036W BDF1P35817 686 aa8.52□□□□□ -1.05
VMA13YPR036W YOR238WQ08634 303 aa8.52□□□□□ -1.05
VMA13YPR036W MST1P07236 462 aa8.5□□□□□ -1.05
VMA13YPR036W XRN1P22147 1528 aaKnown RBP8.45□□□□□ -1.06
VMA13YPR036W VNX1P42839 908 aa8.42□□□□□ -1.06
VMA13YPR036W YCF1P39109 1515 aaKnown RBP8.42□□□□□ -1.06
VMA13YPR036W SPP1Q03012 353 aa8.41□□□□□ -1.06
VMA13YPR036W PTP3P40048 928 aa8.4□□□□□ -1.06
VMA13YPR036W LEO1P38439 464 aa8.39□□□□□ -1.07
VMA13YPR036W YIL055CP40523 627 aaKnown RBP8.38□□□□□ -1.07
VMA13YPR036W DMA1P38823 416 aa8.37□□□□□ -1.07
VMA13YPR036W ATG2P53855 1592 aa8.37□□□□□ -1.07
VMA13YPR036W ABP1P15891 592 aaKnown RBP8.36□□□□□ -1.07
VMA13YPR036W MYO2P19524 1574 aaKnown RBP8.35□□□□□ -1.07
VMA13YPR036W OXP1P28273 1286 aa8.35□□□□□ -1.07
VMA13YPR036W YJL171CP46992 396 aa8.35□□□□□ -1.07
VMA13YPR036W WSC3Q12215 556 aa8.35□□□□□ -1.07
VMA13YPR036W BNI1P41832 1953 aa8.35□□□□□ -1.07
VMA13YPR036W NSR1P27476 414 aaKnown RBP RIP-Chip data8.34□□□□□ -1.07not detected
VMA13YPR036W YAP5P40574 245 aa8.34□□□□□ -1.07
VMA13YPR036W TAF2P23255 1407 aa8.33□□□□□ -1.08
VMA13YPR036W BBC1P47068 1157 aa8.31□□□□□ -1.08
VMA13YPR036W LTE1P07866 1435 aa8.3□□□□□ -1.08
VMA13YPR036W MET5P47169 1442 aa8.26□□□□□ -1.09
VMA13YPR036W SIN3P22579 1536 aa8.24□□□□□ -1.09
VMA13YPR036W CDC25P04821 1589 aa8.24□□□□□ -1.09
VMA13YPR036W GTT3P39996 337 aa8.24□□□□□ -1.09
VMA13YPR036W TIF11P38912 153 aaKnown RBP8.23□□□□□ -1.09
VMA13YPR036W AIR2Q12476 344 aaKnown RBP8.23□□□□□ -1.09
VMA13YPR036W RPA190P10964 1664 aaKnown RBP8.22□□□□□ -1.09
VMA13YPR036W SSK2P53599 1579 aa8.21□□□□□ -1.09
VMA13YPR036W ITT1Q04638 464 aa8.2□□□□□ -1.1
VMA13YPR036W FKH1P40466 484 aa8.2□□□□□ -1.1
VMA13YPR036W DNF1P32660 1571 aa8.19□□□□□ -1.1
VMA13YPR036W AI2P03876 854 aa8.18□□□□□ -1.1
VMA13YPR036W RSM7P47150 247 aa8.18□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms