RNA–Protein interactions for RNA: YPR026W

ATH1, Transcript of Acid trehalase required for utilization of extracellular trehalose, yeastyeast

Gene ATH1, Length 3,636 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATH1YPR026W DRS1P32892 752 aaKnown RBP8.98□□□□□ -0.97
ATH1YPR026W RQC2Q12532 1038 aaKnown RBP8.82□□□□□ -1
ATH1YPR026W MON2P48563 1636 aaPredicted RBP8.41□□□□□ -1.06
ATH1YPR026W TY1B-DR4Q07793 1604 aa8.32□□□□□ -1.08
ATH1YPR026W TAF7Q05021 590 aa8.31□□□□□ -1.08
ATH1YPR026W TFA1P36100 482 aa8.2□□□□□ -1.1
ATH1YPR026W INO80P53115 1489 aa8.18□□□□□ -1.1
ATH1YPR026W BFR2Q06631 534 aaKnown RBP8.14□□□□□ -1.11
ATH1YPR026W TCB3Q03640 1545 aaKnown RBP8.09□□□□□ -1.11
ATH1YPR026W SWR1Q05471 1514 aa7.94□□□□□ -1.14
ATH1YPR026W SGS1P35187 1447 aa7.82□□□□□ -1.16
ATH1YPR026W URN1Q06525 465 aaKnown RBP7.79□□□□□ -1.16
ATH1YPR026W HSL1P34244 1518 aa7.77□□□□□ -1.17
ATH1YPR026W MTC1P47018 478 aaKnown RBP7.74□□□□□ -1.17
ATH1YPR026W KOG1P38873 1557 aa7.68□□□□□ -1.18
ATH1YPR026W SPA2P23201 1466 aaKnown RBP7.67□□□□□ -1.18
ATH1YPR026W THO2P53552 1597 aaKnown RBP7.62□□□□□ -1.19
ATH1YPR026W SIN3P22579 1536 aa7.62□□□□□ -1.19
ATH1YPR026W HIR3P47171 1648 aa7.61□□□□□ -1.19
ATH1YPR026W DNA2P38859 1522 aa7.58□□□□□ -1.2
ATH1YPR026W SPT6P23615 1451 aaKnown RBP7.58□□□□□ -1.2
ATH1YPR026W SSK2P53599 1579 aa7.52□□□□□ -1.21
ATH1YPR026W PEP1P32319 1579 aa7.52□□□□□ -1.21
ATH1YPR026W ATG2P53855 1592 aa7.47□□□□□ -1.21
ATH1YPR026W SSN2P38931 1420 aa7.45□□□□□ -1.22
ATH1YPR026W IOC4Q04213 475 aa7.4□□□□□ -1.23
ATH1YPR026W DMA1P38823 416 aa7.37□□□□□ -1.23
ATH1YPR026W ESP1Q03018 1630 aa7.35□□□□□ -1.23
ATH1YPR026W REV3P14284 1504 aa7.33□□□□□ -1.24
ATH1YPR026W LEO1P38439 464 aa7.27□□□□□ -1.25
ATH1YPR026W BUD4P47136 1447 aa7.26□□□□□ -1.25
ATH1YPR026W TY2B-LR1P0C2J3 1770 aa7.25□□□□□ -1.25
ATH1YPR026W TY2B-FP0CX63 1770 aa7.25□□□□□ -1.25
ATH1YPR026W TY2B-GR2P0CX64 1770 aa7.25□□□□□ -1.25
ATH1YPR026W TY2B-CP25384 1770 aa7.25□□□□□ -1.25
ATH1YPR026W TY2B-DR2Q03494 1770 aa7.25□□□□□ -1.25
ATH1YPR026W TY1B-DR1Q03855 1755 aa7.25□□□□□ -1.25
ATH1YPR026W TY2B-DR3Q07791 1770 aaKnown RBP7.25□□□□□ -1.25
ATH1YPR026W TY2B-OR1Q12113 1770 aa7.25□□□□□ -1.25
ATH1YPR026W TY2B-DR1Q12472 1770 aa7.25□□□□□ -1.25
ATH1YPR026W TY2B-OR2Q12501 1770 aa7.25□□□□□ -1.25
ATH1YPR026W MDS3P53094 1487 aa7.25□□□□□ -1.25
ATH1YPR026W XRN1P22147 1528 aaKnown RBP7.24□□□□□ -1.25
ATH1YPR026W TY1B-BRQ12193 1756 aa7.23□□□□□ -1.25
ATH1YPR026W TY1B-GR3Q12316 1755 aa7.23□□□□□ -1.25
ATH1YPR026W TY1B-ORQ92393 1755 aa7.23□□□□□ -1.25
ATH1YPR026W NAP1P25293 417 aaKnown RBP7.21□□□□□ -1.25
ATH1YPR026W TY1B-DR3Q99231 1755 aa7.21□□□□□ -1.26
ATH1YPR026W MYO2P19524 1574 aaKnown RBP7.2□□□□□ -1.26
ATH1YPR026W TY1B-HO13535 1793 aa7.19□□□□□ -1.26
ATH1YPR026W TY1B-DR5P0C2I2 1755 aa7.19□□□□□ -1.26
ATH1YPR026W TY1B-DR6P0C2I3 1755 aa7.19□□□□□ -1.26
ATH1YPR026W TY1B-LR2P0C2I5 1755 aa7.19□□□□□ -1.26
ATH1YPR026W TY1B-LR3P0C2I6 1755 aaKnown RBP7.19□□□□□ -1.26
ATH1YPR026W TY1B-PR1P0C2I9 1755 aaKnown RBP7.19□□□□□ -1.26
ATH1YPR026W TY1B-PR2P0C2J0 1756 aa7.19□□□□□ -1.26
ATH1YPR026W TY1B-PR3P0C2J1 1755 aaKnown RBP7.19□□□□□ -1.26
ATH1YPR026W TY1B-JR1P47098 1755 aa7.19□□□□□ -1.26
ATH1YPR026W TY1B-ML2Q03434 1755 aaKnown RBP7.19□□□□□ -1.26
ATH1YPR026W TY1B-ER1Q03612 1755 aa7.19□□□□□ -1.26
ATH1YPR026W TY1B-ML1Q04711 1755 aaKnown RBP7.19□□□□□ -1.26
ATH1YPR026W TY1B-GR2Q12269 1755 aa7.19□□□□□ -1.26
ATH1YPR026W TY1B-OLQ12273 1755 aa7.19□□□□□ -1.26
ATH1YPR026W TY1B-PLQ12414 1755 aaKnown RBP7.19□□□□□ -1.26
ATH1YPR026W DIP2Q12220 943 aaPredicted RBP7.19□□□□□ -1.26
ATH1YPR026W TY2B-BQ12491 1770 aa7.18□□□□□ -1.26
ATH1YPR026W YPK9Q12697 1472 aa7.16□□□□□ -1.26
ATH1YPR026W SIS2P36024 562 aa7.14□□□□□ -1.27
ATH1YPR026W YFR016CP43597 1233 aaKnown RBP7.11□□□□□ -1.27
ATH1YPR026W IFH1P39520 1085 aa7.1□□□□□ -1.27
ATH1YPR026W RPO31P04051 1460 aa7.09□□□□□ -1.27
ATH1YPR026W AVT3P36062 692 aa7.07□□□□□ -1.28
ATH1YPR026W SCC2Q04002 1493 aa7.07□□□□□ -1.28
ATH1YPR026W ECM5Q03214 1411 aa7.05□□□□□ -1.28
ATH1YPR026W YCF1P39109 1515 aaKnown RBP7.04□□□□□ -1.28
ATH1YPR026W ABP1P15891 592 aaKnown RBP7.04□□□□□ -1.28
ATH1YPR026W TY1B-JR2P47100 1755 aaKnown RBP7.02□□□□□ -1.29
ATH1YPR026W TY1B-ER2Q03619 1755 aa7.02□□□□□ -1.29
ATH1YPR026W TY1B-MR1Q04214 1755 aa7.02□□□□□ -1.29
ATH1YPR026W TY1B-MR2Q04670 1755 aaKnown RBP7.02□□□□□ -1.29
ATH1YPR026W TY1B-LR1Q12088 1755 aaKnown RBP7.02□□□□□ -1.29
ATH1YPR026W TY1B-NL1Q12112 1755 aa7.02□□□□□ -1.29
ATH1YPR026W TY1B-GR1Q12141 1755 aa7.02□□□□□ -1.29
ATH1YPR026W TY1B-BLQ12490 1755 aa7.02□□□□□ -1.29
ATH1YPR026W RPA190P10964 1664 aaKnown RBP7.01□□□□□ -1.29
ATH1YPR026W ORC1P54784 914 aaPredicted RBP7.01□□□□□ -1.29
ATH1YPR026W POL1P13382 1468 aa7□□□□□ -1.29
ATH1YPR026W BPT1P14772 1559 aa6.97□□□□□ -1.29
ATH1YPR026W KRI1P42846 591 aaKnown RBP6.97□□□□□ -1.29
ATH1YPR026W CHD1P32657 1468 aa6.96□□□□□ -1.29
ATH1YPR026W PTP3P40048 928 aa6.95□□□□□ -1.3
ATH1YPR026W YRB30P53107 440 aaPredicted RBP6.94□□□□□ -1.3
ATH1YPR026W CDC25P04821 1589 aa6.94□□□□□ -1.3
ATH1YPR026W RPO21P04050 1733 aaKnown RBP6.9□□□□□ -1.3
ATH1YPR026W YOR1P53049 1477 aa6.89□□□□□ -1.31
ATH1YPR026W EBP2P36049 427 aaKnown RBP6.88□□□□□ -1.31
ATH1YPR026W ESC1Q03661 1658 aaKnown RBP6.87□□□□□ -1.31
ATH1YPR026W NTE1Q04958 1679 aa6.87□□□□□ -1.31
ATH1YPR026W TOP2P06786 1428 aaKnown RBP6.87□□□□□ -1.31
ATH1YPR026W RKR1Q04781 1562 aa6.86□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 132.4 ms