RNA–Protein interactions for RNA: YNL054W

VAC7, Transcript of Integral vacuolar membrane protein, yeast

Gene VAC7, Length 3,498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAC7	YNL054W	MON2	P48563	1636 aa	Predicted RBP	6.28	□□□□□ -1.4
VAC7	YNL054W	BFR2	Q06631	534 aa	Known RBP	6.25	□□□□□ -1.41
VAC7	YNL054W	NOP2	P40991	618 aa	Known RBP	6.18	□□□□□ -1.42
VAC7	YNL054W	RQC2	Q12532	1038 aa	Known RBP	6.17	□□□□□ -1.42
VAC7	YNL054W	DRS1	P32892	752 aa	Known RBP	6	□□□□□ -1.45
VAC7	YNL054W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	5.97	□□□□□ -1.45	not detected
VAC7	YNL054W	CAB3	P36076	571 aa		5.92	□□□□□ -1.46
VAC7	YNL054W	SGS1	P35187	1447 aa		5.92	□□□□□ -1.46
VAC7	YNL054W	TAF7	Q05021	590 aa		5.84	□□□□□ -1.47
VAC7	YNL054W	SSN2	P38931	1420 aa		5.81	□□□□□ -1.48
VAC7	YNL054W	EBP2	P36049	427 aa	Known RBP	5.8	□□□□□ -1.48
VAC7	YNL054W	SPA2	P23201	1466 aa	Known RBP	5.78	□□□□□ -1.48
VAC7	YNL054W	RSE1	Q04693	1361 aa	Known RBP	5.77	□□□□□ -1.49
VAC7	YNL054W	SAS10	Q12136	610 aa	Predicted RBP	5.76	□□□□□ -1.49
VAC7	YNL054W	YPR148C	Q06523	435 aa		5.72	□□□□□ -1.49
VAC7	YNL054W	LEU3	P08638	886 aa		5.69	□□□□□ -1.5
VAC7	YNL054W	ENP1	P38333	483 aa	Known RBP	5.67	□□□□□ -1.5
VAC7	YNL054W	MNN4	P36044	1178 aa		5.66	□□□□□ -1.5
VAC7	YNL054W	SKI3	P17883	1432 aa	Known RBP	5.65	□□□□□ -1.5
VAC7	YNL054W	POL5	P39985	1022 aa	Known RBP	5.65	□□□□□ -1.51
VAC7	YNL054W	KOG1	P38873	1557 aa		5.61	□□□□□ -1.51
VAC7	YNL054W	AIM44	Q99299	758 aa		5.61	□□□□□ -1.51
VAC7	YNL054W	LEO1	P38439	464 aa		5.6	□□□□□ -1.51
VAC7	YNL054W	SPT7	P35177	1332 aa		5.58	□□□□□ -1.52
VAC7	YNL054W	RTT106	P40161	455 aa		5.57	□□□□□ -1.52
VAC7	YNL054W	YFR016C	P43597	1233 aa	Known RBP	5.57	□□□□□ -1.52
VAC7	YNL054W	SIS2	P36024	562 aa		5.54	□□□□□ -1.52
VAC7	YNL054W	AVT3	P36062	692 aa		5.53	□□□□□ -1.52
VAC7	YNL054W	FUN12	P39730	1002 aa	Known RBP	5.51	□□□□□ -1.53
VAC7	YNL054W	EAF7	P53911	425 aa	Known RBP	5.51	□□□□□ -1.53
VAC7	YNL054W	ORC1	P54784	914 aa	Predicted RBP	5.5	□□□□□ -1.53
VAC7	YNL054W	CLC1	P17891	233 aa		5.48	□□□□□ -1.53
VAC7	YNL054W	SWR1	Q05471	1514 aa		5.48	□□□□□ -1.53
VAC7	YNL054W	IFH1	P39520	1085 aa		5.47	□□□□□ -1.53
VAC7	YNL054W	MMS22	Q06164	1454 aa		5.45	□□□□□ -1.54
VAC7	YNL054W	SEC3	P33332	1336 aa	Known RBP	5.44	□□□□□ -1.54
VAC7	YNL054W	TY1B-DR4	Q07793	1604 aa		5.44	□□□□□ -1.54
VAC7	YNL054W	RPC31	P17890	251 aa		5.43	□□□□□ -1.54
VAC7	YNL054W	TAF2	P23255	1407 aa		5.43	□□□□□ -1.54
VAC7	YNL054W	PRS1	P32895	427 aa	Known RBP	5.43	□□□□□ -1.54
VAC7	YNL054W	INO80	P53115	1489 aa		5.41	□□□□□ -1.54
VAC7	YNL054W	IKI3	Q06706	1349 aa	Known RBP	5.39	□□□□□ -1.55
VAC7	YNL054W	TCB2	P48231	1178 aa		5.39	□□□□□ -1.55
VAC7	YNL054W	PSD2	P53037	1138 aa	Known RBP	5.39	□□□□□ -1.55
VAC7	YNL054W	FPR3	P38911	411 aa	Known RBP	5.39	□□□□□ -1.55
VAC7	YNL054W	URN1	Q06525	465 aa	Known RBP	5.38	□□□□□ -1.55
VAC7	YNL054W	RNA1	P11745	407 aa	Known RBP	5.37	□□□□□ -1.55
VAC7	YNL054W	TFA1	P36100	482 aa		5.37	□□□□□ -1.55
VAC7	YNL054W	IME2	P32581	645 aa		5.36	□□□□□ -1.55
VAC7	YNL054W	CFT1	Q06632	1357 aa	Known RBP	5.36	□□□□□ -1.55
VAC7	YNL054W	SSM4	P40318	1319 aa		5.35	□□□□□ -1.55
VAC7	YNL054W	TCB3	Q03640	1545 aa	Known RBP	5.35	□□□□□ -1.55
VAC7	YNL054W	CWC22	P53333	577 aa	Known RBP	5.34	□□□□□ -1.55
VAC7	YNL054W	STH1	P32597	1359 aa		5.34	□□□□□ -1.55
VAC7	YNL054W	TRM732	Q03496	1420 aa		5.34	□□□□□ -1.55
VAC7	YNL054W	XRN1	P22147	1528 aa	Known RBP	5.33	□□□□□ -1.56
VAC7	YNL054W	SPP41	P38904	1435 aa		5.33	□□□□□ -1.56
VAC7	YNL054W	QCR6	P00127	147 aa		5.33	□□□□□ -1.56
VAC7	YNL054W	DJP1	P40564	432 aa		5.32	□□□□□ -1.56
VAC7	YNL054W	YRB30	P53107	440 aa	Predicted RBP	5.32	□□□□□ -1.56
VAC7	YNL054W	UFD4	P33202	1483 aa		5.31	□□□□□ -1.56
VAC7	YNL054W	MTC1	P47018	478 aa	Known RBP	5.29	□□□□□ -1.56
VAC7	YNL054W	NOP7	P53261	605 aa	Known RBP	5.28	□□□□□ -1.56
VAC7	YNL054W	PAN1	P32521	1480 aa		5.27	□□□□□ -1.57
VAC7	YNL054W	YPP1	P46951	817 aa		5.27	□□□□□ -1.57
VAC7	YNL054W	OPY1	P38271	328 aa		5.27	□□□□□ -1.57
VAC7	YNL054W	SNF7	P39929	240 aa	Known RBP	5.26	□□□□□ -1.57
VAC7	YNL054W	RPS0B	P46654	252 aa	Known RBP	5.26	□□□□□ -1.57
VAC7	YNL054W	YTA7	P40340	1379 aa		5.26	□□□□□ -1.57
VAC7	YNL054W	NAP1	P25293	417 aa	Known RBP	5.25	□□□□□ -1.57
VAC7	YNL054W	MYO2	P19524	1574 aa	Known RBP	5.25	□□□□□ -1.57
VAC7	YNL054W	SPT21	P35209	758 aa		5.24	□□□□□ -1.57
VAC7	YNL054W	PAF1	P38351	445 aa		5.24	□□□□□ -1.57
VAC7	YNL054W	FPR4	Q06205	392 aa	Predicted RBP	5.24	□□□□□ -1.57
VAC7	YNL054W	SSK2	P53599	1579 aa		5.24	□□□□□ -1.57
VAC7	YNL054W	DNA2	P38859	1522 aa		5.24	□□□□□ -1.57
VAC7	YNL054W	BUD4	P47136	1447 aa		5.24	□□□□□ -1.57
VAC7	YNL054W	NOP58	Q12499	511 aa	Known RBP	5.23	□□□□□ -1.57
VAC7	YNL054W	STU1	P38198	1513 aa		5.23	□□□□□ -1.57
VAC7	YNL054W	CHD1	P32657	1468 aa		5.23	□□□□□ -1.57
VAC7	YNL054W	ROX1	P25042	368 aa		5.22	□□□□□ -1.57
VAC7	YNL054W	THO2	P53552	1597 aa	Known RBP	5.22	□□□□□ -1.57
VAC7	YNL054W	SWE1	P32944	819 aa		5.21	□□□□□ -1.58
VAC7	YNL054W	RAD26	P40352	1085 aa		5.21	□□□□□ -1.58
VAC7	YNL054W	YGR130C	P53278	816 aa		5.21	□□□□□ -1.58
VAC7	YNL054W	CTR9	P89105	1077 aa		5.2	□□□□□ -1.58
VAC7	YNL054W	PDS5	Q04264	1277 aa		5.2	□□□□□ -1.58
VAC7	YNL054W	SPT6	P23615	1451 aa	Known RBP	5.2	□□□□□ -1.58
VAC7	YNL054W	DEF1	P35732	738 aa	Known RBP	5.2	□□□□□ -1.58
VAC7	YNL054W	YGL081W	P53156	320 aa		5.2	□□□□□ -1.58
VAC7	YNL054W	SLN1	P39928	1220 aa	Predicted RBP	5.19	□□□□□ -1.58
VAC7	YNL054W	ENV11	P53246	860 aa		5.19	□□□□□ -1.58
VAC7	YNL054W	SPB4	P25808	606 aa	Predicted RBP	5.18	□□□□□ -1.58
VAC7	YNL054W	ARL1	P38116	183 aa	Known RBP	5.18	□□□□□ -1.58
VAC7	YNL054W	ECM5	Q03214	1411 aa		5.18	□□□□□ -1.58
VAC7	YNL054W	SMC4	Q12267	1418 aa		5.17	□□□□□ -1.58
VAC7	YNL054W	CLB5	P30283	435 aa		5.17	□□□□□ -1.58
VAC7	YNL054W	VPS24	P36095	224 aa	Known RBP	5.17	□□□□□ -1.58
VAC7	YNL054W	DOS2	P54858	310 aa		5.17	□□□□□ -1.58
VAC7	YNL054W	PSH1	Q12161	406 aa		5.17	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms