RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W DRS1P32892 752 aaKnown RBP16■□□□□ 0.15
HDA1YNL021W TFA1P36100 482 aa14.66□□□□□ -0.06
HDA1YNL021W MTC1P47018 478 aaKnown RBP14.56□□□□□ -0.08
HDA1YNL021W BFR2Q06631 534 aaKnown RBP14.42□□□□□ -0.1
HDA1YNL021W RQC2Q12532 1038 aaKnown RBP13.54□□□□□ -0.24
HDA1YNL021W AVT3P36062 692 aa13.49□□□□□ -0.25
HDA1YNL021W DIP2Q12220 943 aaPredicted RBP13.16□□□□□ -0.3
HDA1YNL021W TAF7Q05021 590 aa13.04□□□□□ -0.32
HDA1YNL021W DMA1P38823 416 aa12.62□□□□□ -0.39
HDA1YNL021W LEO1P38439 464 aa12.2□□□□□ -0.46
HDA1YNL021W RSE1Q04693 1361 aaKnown RBP11.95□□□□□ -0.5
HDA1YNL021W PTP3P40048 928 aa11.83□□□□□ -0.52
HDA1YNL021W LEU3P08638 886 aa11.62□□□□□ -0.55
HDA1YNL021W SAS10Q12136 610 aaPredicted RBP11.55□□□□□ -0.56
HDA1YNL021W RPL17AP05740 184 aaKnown RBP11.45□□□□□ -0.58
HDA1YNL021W SSP1P38871 571 aa11.45□□□□□ -0.58
HDA1YNL021W RPL17BP46990 184 aaKnown RBP11.45□□□□□ -0.58
HDA1YNL021W RIM101P33400 625 aa11.41□□□□□ -0.58
HDA1YNL021W ISW2Q08773 1120 aa11.38□□□□□ -0.59
HDA1YNL021W ABP1P15891 592 aaKnown RBP11.35□□□□□ -0.59
HDA1YNL021W DMA2P53924 522 aa11.33□□□□□ -0.6
HDA1YNL021W SPT21P35209 758 aa11.32□□□□□ -0.6
HDA1YNL021W RPG1P38249 964 aaKnown RBP11.3□□□□□ -0.6
HDA1YNL021W OXP1P28273 1286 aa11.17□□□□□ -0.62
HDA1YNL021W RPN1P38764 993 aaKnown RBP11.11□□□□□ -0.63
HDA1YNL021W REB1P21538 810 aa11.09□□□□□ -0.63
HDA1YNL021W YLR271WQ06152 274 aa11.08□□□□□ -0.64
HDA1YNL021W YAH1Q12184 172 aaKnown RBP11.03□□□□□ -0.64
HDA1YNL021W RLF2Q12495 606 aa11□□□□□ -0.65
HDA1YNL021W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.98□□□□□ -0.65not detected
HDA1YNL021W IFH1P39520 1085 aa10.93□□□□□ -0.66
HDA1YNL021W SGS1P35187 1447 aa10.92□□□□□ -0.66
HDA1YNL021W PRI1P10363 409 aa10.91□□□□□ -0.66
HDA1YNL021W MGA2P40578 1113 aa10.9□□□□□ -0.67
HDA1YNL021W CKB1P43639 278 aa10.86□□□□□ -0.67
HDA1YNL021W CST9Q06032 482 aa10.84□□□□□ -0.67
HDA1YNL021W INO80P53115 1489 aa10.75□□□□□ -0.69
HDA1YNL021W YIL055CP40523 627 aaKnown RBP10.73□□□□□ -0.69
HDA1YNL021W SPB4P25808 606 aaPredicted RBP10.69□□□□□ -0.7
HDA1YNL021W YPR148CQ06523 435 aa10.68□□□□□ -0.7
HDA1YNL021W RSM7P47150 247 aa10.67□□□□□ -0.7
HDA1YNL021W YKR023WP36119 530 aaKnown RBP10.63□□□□□ -0.71
HDA1YNL021W PSD2P53037 1138 aaKnown RBP10.63□□□□□ -0.71
HDA1YNL021W TCB3Q03640 1545 aaKnown RBP10.62□□□□□ -0.71
HDA1YNL021W RAM2P29703 316 aa10.61□□□□□ -0.71
HDA1YNL021W SET1P38827 1080 aaKnown RBP10.6□□□□□ -0.71
HDA1YNL021W VPS70P47161 811 aa10.6□□□□□ -0.71
HDA1YNL021W ORC1P54784 914 aaPredicted RBP10.6□□□□□ -0.71
HDA1YNL021W KIN1P13185 1064 aa10.55□□□□□ -0.72
HDA1YNL021W DSF2P38213 736 aa10.55□□□□□ -0.72
HDA1YNL021W YML020WQ03722 664 aa10.49□□□□□ -0.73
HDA1YNL021W IOC4Q04213 475 aa10.49□□□□□ -0.73
HDA1YNL021W MON2P48563 1636 aaPredicted RBP10.49□□□□□ -0.73
HDA1YNL021W NAP1P25293 417 aaKnown RBP10.49□□□□□ -0.73
HDA1YNL021W TY1B-DR4Q07793 1604 aa10.48□□□□□ -0.73
HDA1YNL021W NOP8Q08287 484 aaPredicted RBP10.48□□□□□ -0.73
HDA1YNL021W YNR021WP53723 404 aaKnown RBP10.46□□□□□ -0.74
HDA1YNL021W AAD16Q02895 342 aa10.43□□□□□ -0.74
HDA1YNL021W TSR3Q12094 313 aaKnown RBP10.42□□□□□ -0.74
HDA1YNL021W AIM44Q99299 758 aa10.42□□□□□ -0.74
HDA1YNL021W AI2P03876 854 aa10.4□□□□□ -0.74
HDA1YNL021W PBS2P08018 668 aa10.4□□□□□ -0.74
HDA1YNL021W SPA2P23201 1466 aaKnown RBP10.4□□□□□ -0.74
HDA1YNL021W GLC3P32775 704 aa10.39□□□□□ -0.75
HDA1YNL021W GUA1P38625 525 aaKnown RBP10.39□□□□□ -0.75
HDA1YNL021W SSN2P38931 1420 aa10.39□□□□□ -0.75
HDA1YNL021W RCR1P38212 213 aa10.39□□□□□ -0.75
HDA1YNL021W AIM7Q12156 149 aa10.36□□□□□ -0.75
HDA1YNL021W TFC8Q12308 588 aa10.36□□□□□ -0.75
HDA1YNL021W HOP09932 586 aa10.34□□□□□ -0.75
HDA1YNL021W SLX8P40072 274 aa10.3□□□□□ -0.76
HDA1YNL021W DCD1P06773 312 aa10.3□□□□□ -0.76
HDA1YNL021W NUP42P49686 430 aaKnown RBP10.3□□□□□ -0.76
HDA1YNL021W DIT2P21595 489 aa10.29□□□□□ -0.76
HDA1YNL021W SWR1Q05471 1514 aa10.27□□□□□ -0.77
HDA1YNL021W MAM3Q12296 706 aa10.25□□□□□ -0.77
HDA1YNL021W HSL1P34244 1518 aa10.25□□□□□ -0.77
HDA1YNL021W HGH1P48362 394 aaKnown RBP10.25□□□□□ -0.77
HDA1YNL021W SUB2Q07478 446 aaKnown RBP10.25□□□□□ -0.77
HDA1YNL021W GEF1P37020 779 aa10.24□□□□□ -0.77
HDA1YNL021W SPT6P23615 1451 aaKnown RBP10.23□□□□□ -0.77
HDA1YNL021W SSA1P10591 642 aaKnown RBP10.22□□□□□ -0.77
HDA1YNL021W IES2P40154 320 aa10.22□□□□□ -0.77
HDA1YNL021W MAK11P20484 414 aaKnown RBP10.21□□□□□ -0.78
HDA1YNL021W HPC2Q01448 625 aa10.19□□□□□ -0.78
HDA1YNL021W TFB3Q03290 321 aa10.18□□□□□ -0.78
HDA1YNL021W FAP1P53971 965 aa10.17□□□□□ -0.78
HDA1YNL021W MRM1P25270 412 aa10.16□□□□□ -0.78
HDA1YNL021W BCH2P36122 765 aa10.13□□□□□ -0.79
HDA1YNL021W MRX12P47084 519 aa10.13□□□□□ -0.79
HDA1YNL021W PKC1P24583 1151 aa10.12□□□□□ -0.79
HDA1YNL021W BBC1P47068 1157 aa10.1□□□□□ -0.79
HDA1YNL021W MAK21Q12176 1025 aaKnown RBP10.1□□□□□ -0.79
HDA1YNL021W GLN1P32288 370 aaKnown RBP10.09□□□□□ -0.79
HDA1YNL021W COQ8P27697 501 aa10.08□□□□□ -0.8
HDA1YNL021W HIR3P47171 1648 aa10.08□□□□□ -0.8
HDA1YNL021W REF2P42073 533 aaPredicted RBP10.07□□□□□ -0.8
HDA1YNL021W RTG3P38165 486 aa10.07□□□□□ -0.8
HDA1YNL021W CDC27P38042 758 aa10.04□□□□□ -0.8
HDA1YNL021W BIM1P40013 344 aa10.02□□□□□ -0.81
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms