RNA–Protein interactions for RNA: YGL099W

LSG1, Transcript of Putative GTPase involved in 60S ribosomal subunit biogenesis, yeastyeast

Gene LSG1, Length 1,923 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSG1YGL099W MTC1P47018 478 aaKnown RBP9.94□□□□□ -0.82
LSG1YGL099W DRS1P32892 752 aaKnown RBP9.88□□□□□ -0.83
LSG1YGL099W RQC2Q12532 1038 aaKnown RBP9.4□□□□□ -0.9
LSG1YGL099W BFR2Q06631 534 aaKnown RBP9.36□□□□□ -0.91
LSG1YGL099W NOP2P40991 618 aaKnown RBP8.55□□□□□ -1.04
LSG1YGL099W URN1Q06525 465 aaKnown RBP8.5□□□□□ -1.05
LSG1YGL099W DIP2Q12220 943 aaPredicted RBP8.45□□□□□ -1.06
LSG1YGL099W EBP2P36049 427 aaKnown RBP8.42□□□□□ -1.06
LSG1YGL099W CAB3P36076 571 aa8.39□□□□□ -1.07
LSG1YGL099W AVT3P36062 692 aa8.33□□□□□ -1.08
LSG1YGL099W SIS2P36024 562 aa8.31□□□□□ -1.08
LSG1YGL099W TAF7Q05021 590 aa8.27□□□□□ -1.09
LSG1YGL099W FAP1P53971 965 aa8.23□□□□□ -1.09
LSG1YGL099W NSR1P27476 414 aaKnown RBP RIP-Chip data8.19□□□□□ -1.1not detected
LSG1YGL099W ISW2Q08773 1120 aa8.09□□□□□ -1.11
LSG1YGL099W PRI1P10363 409 aa8.05□□□□□ -1.12
LSG1YGL099W YFR016CP43597 1233 aaKnown RBP8.03□□□□□ -1.12
LSG1YGL099W YPR148CQ06523 435 aa8.03□□□□□ -1.12
LSG1YGL099W RPG1P38249 964 aaKnown RBP7.99□□□□□ -1.13
LSG1YGL099W RSE1Q04693 1361 aaKnown RBP7.98□□□□□ -1.13
LSG1YGL099W TFA1P36100 482 aa7.95□□□□□ -1.14
LSG1YGL099W AAD16Q02895 342 aa7.9□□□□□ -1.14
LSG1YGL099W RPS0BP46654 252 aaKnown RBP7.85□□□□□ -1.15
LSG1YGL099W SKI3P17883 1432 aaKnown RBP7.76□□□□□ -1.17
LSG1YGL099W CWC22P53333 577 aaKnown RBP7.76□□□□□ -1.17
LSG1YGL099W KRI1P42846 591 aaKnown RBP7.73□□□□□ -1.17
LSG1YGL099W PRY3P47033 881 aa7.71□□□□□ -1.18
LSG1YGL099W RPL17AP05740 184 aaKnown RBP7.7□□□□□ -1.18
LSG1YGL099W RPL17BP46990 184 aaKnown RBP7.7□□□□□ -1.18
LSG1YGL099W TCB2P48231 1178 aa7.68□□□□□ -1.18
LSG1YGL099W YRB30P53107 440 aaPredicted RBP7.68□□□□□ -1.18
LSG1YGL099W TSR3Q12094 313 aaKnown RBP7.62□□□□□ -1.19
LSG1YGL099W REB1P21538 810 aa7.6□□□□□ -1.19
LSG1YGL099W SPA2P23201 1466 aaKnown RBP7.59□□□□□ -1.19
LSG1YGL099W ENV11P53246 860 aa7.56□□□□□ -1.2
LSG1YGL099W MNN4P36044 1178 aa7.56□□□□□ -1.2
LSG1YGL099W LEO1P38439 464 aa7.56□□□□□ -1.2
LSG1YGL099W AIM44Q99299 758 aa7.54□□□□□ -1.2
LSG1YGL099W ENP1P38333 483 aaKnown RBP7.54□□□□□ -1.2
LSG1YGL099W DEF1P35732 738 aaKnown RBP7.53□□□□□ -1.2
LSG1YGL099W NUG1P40010 520 aaKnown RBP7.5□□□□□ -1.21
LSG1YGL099W TCB3Q03640 1545 aaKnown RBP7.49□□□□□ -1.21
LSG1YGL099W NOP53Q12080 455 aaKnown RBP7.48□□□□□ -1.21
LSG1YGL099W SPT7P35177 1332 aa7.48□□□□□ -1.21
LSG1YGL099W NAP1P25293 417 aaKnown RBP7.46□□□□□ -1.21
LSG1YGL099W IOC4Q04213 475 aa7.46□□□□□ -1.21
LSG1YGL099W RLF2Q12495 606 aa7.46□□□□□ -1.21
LSG1YGL099W SEC3P33332 1336 aaKnown RBP7.46□□□□□ -1.21
LSG1YGL099W CLC1P17891 233 aa7.46□□□□□ -1.22
LSG1YGL099W YGR130CP53278 816 aa7.45□□□□□ -1.22
LSG1YGL099W PSH1Q12161 406 aa7.44□□□□□ -1.22
LSG1YGL099W SPT21P35209 758 aa7.44□□□□□ -1.22
LSG1YGL099W FPR3P38911 411 aaKnown RBP7.44□□□□□ -1.22
LSG1YGL099W QCR6P00127 147 aa7.42□□□□□ -1.22
LSG1YGL099W SSN2P38931 1420 aa7.41□□□□□ -1.22
LSG1YGL099W SGS1P35187 1447 aa7.4□□□□□ -1.22
LSG1YGL099W IME2P32581 645 aa7.4□□□□□ -1.23
LSG1YGL099W SPT2P06843 333 aaPredicted RBP7.36□□□□□ -1.23
LSG1YGL099W YCK3P39962 524 aa7.36□□□□□ -1.23
LSG1YGL099W FPR4Q06205 392 aaPredicted RBP7.36□□□□□ -1.23
LSG1YGL099W RNA1P11745 407 aaKnown RBP7.35□□□□□ -1.23
LSG1YGL099W STH1P32597 1359 aa7.34□□□□□ -1.23
LSG1YGL099W MRPL32P25348 183 aa7.31□□□□□ -1.24
LSG1YGL099W RIM101P33400 625 aa7.31□□□□□ -1.24
LSG1YGL099W RLP24Q07915 199 aaKnown RBP7.31□□□□□ -1.24
LSG1YGL099W PRS1P32895 427 aaKnown RBP7.28□□□□□ -1.24
LSG1YGL099W SPC110P32380 944 aa7.27□□□□□ -1.25
LSG1YGL099W FUN12P39730 1002 aaKnown RBP7.27□□□□□ -1.25
LSG1YGL099W HAA1Q12753 694 aaKnown RBP7.27□□□□□ -1.25
LSG1YGL099W RIX1P38883 763 aaPredicted RBP7.27□□□□□ -1.25
LSG1YGL099W YTA7P40340 1379 aa7.26□□□□□ -1.25
LSG1YGL099W HSP82P02829 709 aaKnown RBP7.26□□□□□ -1.25
LSG1YGL099W OPY1P38271 328 aa7.25□□□□□ -1.25
LSG1YGL099W IFH1P39520 1085 aa7.25□□□□□ -1.25
LSG1YGL099W PLP2Q12017 286 aa7.25□□□□□ -1.25
LSG1YGL099W NMD2P38798 1089 aaKnown RBP7.23□□□□□ -1.25
LSG1YGL099W SAS10Q12136 610 aaPredicted RBP7.23□□□□□ -1.25
LSG1YGL099W INO80P53115 1489 aa7.23□□□□□ -1.25
LSG1YGL099W EAF7P53911 425 aaKnown RBP7.22□□□□□ -1.25
LSG1YGL099W YNL011CP53980 444 aa7.22□□□□□ -1.25
LSG1YGL099W YKR023WP36119 530 aaKnown RBP7.21□□□□□ -1.25
LSG1YGL099W RPN1P38764 993 aaKnown RBP7.2□□□□□ -1.26
LSG1YGL099W GRX3Q03835 250 aa7.2□□□□□ -1.26
LSG1YGL099W SNU71P53207 620 aaKnown RBP7.19□□□□□ -1.26
LSG1YGL099W VPS4P52917 437 aa7.18□□□□□ -1.26
LSG1YGL099W PIL1P53252 339 aaKnown RBP7.18□□□□□ -1.26
LSG1YGL099W POL5P39985 1022 aaKnown RBP7.17□□□□□ -1.26
LSG1YGL099W PAF1P38351 445 aa7.17□□□□□ -1.26
LSG1YGL099W CFT1Q06632 1357 aaKnown RBP7.16□□□□□ -1.26
LSG1YGL099W SNF7P39929 240 aaKnown RBP7.15□□□□□ -1.26
LSG1YGL099W MDG1P53885 366 aa7.15□□□□□ -1.26
LSG1YGL099W SWE1P32944 819 aa7.15□□□□□ -1.27
LSG1YGL099W TIF4632P39936 914 aaKnown RBP7.15□□□□□ -1.27
LSG1YGL099W ETT1Q08421 412 aaKnown RBP7.15□□□□□ -1.27
LSG1YGL099W UFD4P33202 1483 aa7.14□□□□□ -1.27
LSG1YGL099W RAD26P40352 1085 aa7.13□□□□□ -1.27
LSG1YGL099W ECM5Q03214 1411 aa7.12□□□□□ -1.27
LSG1YGL099W CTR9P89105 1077 aa7.12□□□□□ -1.27
LSG1YGL099W MMS22Q06164 1454 aa7.12□□□□□ -1.27
LSG1YGL099W RPC31P17890 251 aa7.11□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms