RNA–Protein interactions for RNA: YFR031C

SMC2, Transcript of Subunit of the condensin complex, yeastyeast

Gene SMC2, Length 3,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC2YFR031C DRS1P32892 752 aaKnown RBP6.53□□□□□ -1.36
SMC2YFR031C BFR2Q06631 534 aaKnown RBP6.04□□□□□ -1.44
SMC2YFR031C RQC2Q12532 1038 aaKnown RBP6.03□□□□□ -1.44
SMC2YFR031C TFA1P36100 482 aa5.96□□□□□ -1.45
SMC2YFR031C TAF7Q05021 590 aa5.87□□□□□ -1.47
SMC2YFR031C DMA1P38823 416 aa5.52□□□□□ -1.53
SMC2YFR031C MTC1P47018 478 aaKnown RBP5.41□□□□□ -1.54
SMC2YFR031C FAP1P53971 965 aa5.3□□□□□ -1.56
SMC2YFR031C DIP2Q12220 943 aaPredicted RBP5.17□□□□□ -1.58
SMC2YFR031C AVT3P36062 692 aa5.13□□□□□ -1.59
SMC2YFR031C LEO1P38439 464 aa5.12□□□□□ -1.59
SMC2YFR031C PTP3P40048 928 aa5.11□□□□□ -1.59
SMC2YFR031C DMA2P53924 522 aa5.01□□□□□ -1.61
SMC2YFR031C URN1Q06525 465 aaKnown RBP4.94□□□□□ -1.62
SMC2YFR031C IOC4Q04213 475 aa4.88□□□□□ -1.63
SMC2YFR031C PRY3P47033 881 aa4.88□□□□□ -1.63
SMC2YFR031C AIM44Q99299 758 aa4.81□□□□□ -1.64
SMC2YFR031C ABP1P15891 592 aaKnown RBP4.76□□□□□ -1.65
SMC2YFR031C NAP1P25293 417 aaKnown RBP4.73□□□□□ -1.65
SMC2YFR031C LEU3P08638 886 aa4.71□□□□□ -1.65
SMC2YFR031C RLF2Q12495 606 aa4.69□□□□□ -1.66
SMC2YFR031C IFH1P39520 1085 aa4.66□□□□□ -1.66
SMC2YFR031C YAH1Q12184 172 aaKnown RBP4.65□□□□□ -1.66
SMC2YFR031C SPB4P25808 606 aaPredicted RBP4.63□□□□□ -1.67
SMC2YFR031C RPN1P38764 993 aaKnown RBP4.61□□□□□ -1.67
SMC2YFR031C RSE1Q04693 1361 aaKnown RBP4.6□□□□□ -1.67
SMC2YFR031C YML020WQ03722 664 aa4.59□□□□□ -1.67
SMC2YFR031C SSP1P38871 571 aa4.58□□□□□ -1.68
SMC2YFR031C ISW2Q08773 1120 aa4.58□□□□□ -1.68
SMC2YFR031C AAD16Q02895 342 aa4.56□□□□□ -1.68
SMC2YFR031C BRL1P38770 471 aa4.55□□□□□ -1.68
SMC2YFR031C RPL17AP05740 184 aaKnown RBP4.51□□□□□ -1.69
SMC2YFR031C RPL17BP46990 184 aaKnown RBP4.51□□□□□ -1.69
SMC2YFR031C RPG1P38249 964 aaKnown RBP4.51□□□□□ -1.69
SMC2YFR031C NOP7P53261 605 aaKnown RBP4.5□□□□□ -1.69
SMC2YFR031C ORC1P54784 914 aaPredicted RBP4.5□□□□□ -1.69
SMC2YFR031C SAS10Q12136 610 aaPredicted RBP4.49□□□□□ -1.69
SMC2YFR031C SLX8P40072 274 aa4.48□□□□□ -1.69
SMC2YFR031C MET10P39692 1035 aa4.46□□□□□ -1.69
SMC2YFR031C KIN1P13185 1064 aa4.46□□□□□ -1.7
SMC2YFR031C VPS70P47161 811 aa4.45□□□□□ -1.7
SMC2YFR031C SNU71P53207 620 aaKnown RBP4.45□□□□□ -1.7
SMC2YFR031C YRB30P53107 440 aaPredicted RBP4.44□□□□□ -1.7
SMC2YFR031C CKB1P43639 278 aa4.43□□□□□ -1.7
SMC2YFR031C ARP8Q12386 881 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
SMC2YFR031C YJR008WP47085 338 aa4.43□□□□□ -1.7
SMC2YFR031C TSR3Q12094 313 aaKnown RBP4.43□□□□□ -1.7
SMC2YFR031C REB1P21538 810 aa4.42□□□□□ -1.7
SMC2YFR031C RTS3P53289 263 aa4.39□□□□□ -1.71
SMC2YFR031C GLC3P32775 704 aa4.39□□□□□ -1.71
SMC2YFR031C BRN1P38170 754 aa4.37□□□□□ -1.71
SMC2YFR031C YIL055CP40523 627 aaKnown RBP4.37□□□□□ -1.71
SMC2YFR031C HGH1P48362 394 aaKnown RBP4.37□□□□□ -1.71
SMC2YFR031C SSA1P10591 642 aaKnown RBP4.36□□□□□ -1.71
SMC2YFR031C MRPL32P25348 183 aa4.34□□□□□ -1.71
SMC2YFR031C TOP1P04786 769 aa4.34□□□□□ -1.71
SMC2YFR031C NUG1P40010 520 aaKnown RBP4.34□□□□□ -1.71
SMC2YFR031C GEF1P37020 779 aa4.33□□□□□ -1.72
SMC2YFR031C HAA1Q12753 694 aaKnown RBP4.33□□□□□ -1.72
SMC2YFR031C PRI1P10363 409 aa4.33□□□□□ -1.72
SMC2YFR031C LAM6Q08001 693 aa4.33□□□□□ -1.72
SMC2YFR031C GUA1P38625 525 aaKnown RBP4.32□□□□□ -1.72
SMC2YFR031C MDG1P53885 366 aa4.32□□□□□ -1.72
SMC2YFR031C YLR271WQ06152 274 aa4.32□□□□□ -1.72
SMC2YFR031C CST9Q06032 482 aa4.31□□□□□ -1.72
SMC2YFR031C RRN6P32786 894 aa4.3□□□□□ -1.72
SMC2YFR031C YJL007CP47080 104 aa4.3□□□□□ -1.72
SMC2YFR031C SUB2Q07478 446 aaKnown RBP4.29□□□□□ -1.72
SMC2YFR031C NOP8Q08287 484 aaPredicted RBP4.29□□□□□ -1.72
SMC2YFR031C BUD21Q08492 214 aaPredicted RBP4.29□□□□□ -1.72
SMC2YFR031C SLD2P34252 453 aa4.28□□□□□ -1.72
SMC2YFR031C SUB1P54000 292 aaKnown RBP4.28□□□□□ -1.72
SMC2YFR031C MAM3Q12296 706 aa4.28□□□□□ -1.72
SMC2YFR031C RPL34AP87262 121 aaPredicted RBP4.28□□□□□ -1.73
SMC2YFR031C SET1P38827 1080 aaKnown RBP4.27□□□□□ -1.73
SMC2YFR031C VPS72Q03388 795 aa4.27□□□□□ -1.73
SMC2YFR031C AIM21P40563 679 aa4.27□□□□□ -1.73
SMC2YFR031C OXP1P28273 1286 aa4.26□□□□□ -1.73
SMC2YFR031C ALD4P46367 519 aaKnown RBP4.26□□□□□ -1.73
SMC2YFR031C TFB3Q03290 321 aa4.26□□□□□ -1.73
SMC2YFR031C RPL34BP40525 121 aaKnown RBP4.26□□□□□ -1.73
SMC2YFR031C MGA2P40578 1113 aa4.26□□□□□ -1.73
SMC2YFR031C PKC1P24583 1151 aa4.25□□□□□ -1.73
SMC2YFR031C CPS1P27614 576 aa4.25□□□□□ -1.73
SMC2YFR031C SPC42P36094 363 aa4.25□□□□□ -1.73
SMC2YFR031C ATF2P53296 535 aa4.25□□□□□ -1.73
SMC2YFR031C MRX12P47084 519 aa4.24□□□□□ -1.73
SMC2YFR031C ITT1Q04638 464 aa4.24□□□□□ -1.73
SMC2YFR031C ERG12P07277 443 aa4.23□□□□□ -1.73
SMC2YFR031C PPG1P32838 368 aa4.23□□□□□ -1.73
SMC2YFR031C JSN1P47135 1091 aaKnown RBP RIP-Chip data4.23□□□□□ -1.73not detected
SMC2YFR031C RIM101P33400 625 aa4.22□□□□□ -1.73
SMC2YFR031C IES2P40154 320 aa4.22□□□□□ -1.73
SMC2YFR031C HAT1Q12341 374 aa4.22□□□□□ -1.73
SMC2YFR031C PBS2P08018 668 aa4.22□□□□□ -1.73
SMC2YFR031C TSR4P25040 408 aa4.22□□□□□ -1.73
SMC2YFR031C SWE1P32944 819 aa4.22□□□□□ -1.73
SMC2YFR031C YPR204WQ08995 1032 aa4.21□□□□□ -1.74
SMC2YFR031C DIT2P21595 489 aa4.2□□□□□ -1.74
SMC2YFR031C BIM1P40013 344 aa4.2□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms