RNA–Protein interactions for RNA: YFL007W

BLM10, Transcript of Proteasome activator, yeast

Gene BLM10, Length 6,432 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BLM10	YFL007W	RQC2	Q12532	1038 aa	Known RBP	7.95	□□□□□ -1.14
BLM10	YFL007W	TAF7	Q05021	590 aa		7.14	□□□□□ -1.27
BLM10	YFL007W	TFA1	P36100	482 aa		7.08	□□□□□ -1.28
BLM10	YFL007W	BFR2	Q06631	534 aa	Known RBP	6.95	□□□□□ -1.3
BLM10	YFL007W	DRS1	P32892	752 aa	Known RBP	6.86	□□□□□ -1.31
BLM10	YFL007W	MNN4	P36044	1178 aa		6.64	□□□□□ -1.35
BLM10	YFL007W	AIM44	Q99299	758 aa		6.64	□□□□□ -1.35
BLM10	YFL007W	YRB30	P53107	440 aa	Predicted RBP	6.59	□□□□□ -1.36
BLM10	YFL007W	CAB3	P36076	571 aa		6.58	□□□□□ -1.36
BLM10	YFL007W	LEO1	P38439	464 aa		6.56	□□□□□ -1.36
BLM10	YFL007W	FPR3	P38911	411 aa	Known RBP	6.37	□□□□□ -1.39
BLM10	YFL007W	NAP1	P25293	417 aa	Known RBP	6.36	□□□□□ -1.39
BLM10	YFL007W	TOP1	P04786	769 aa		6.31	□□□□□ -1.4
BLM10	YFL007W	FUN12	P39730	1002 aa	Known RBP	6.29	□□□□□ -1.4
BLM10	YFL007W	RPS0B	P46654	252 aa	Known RBP	6.26	□□□□□ -1.41
BLM10	YFL007W	RNA1	P11745	407 aa	Known RBP	6.24	□□□□□ -1.41
BLM10	YFL007W	QCR6	P00127	147 aa		6.23	□□□□□ -1.41
BLM10	YFL007W	EBP2	P36049	427 aa	Known RBP	6.23	□□□□□ -1.41
BLM10	YFL007W	NOP2	P40991	618 aa	Known RBP	6.21	□□□□□ -1.42
BLM10	YFL007W	DEF1	P35732	738 aa	Known RBP	6.18	□□□□□ -1.42
BLM10	YFL007W	MTC1	P47018	478 aa	Known RBP	6.18	□□□□□ -1.42
BLM10	YFL007W	RIX1	P38883	763 aa	Predicted RBP	6.15	□□□□□ -1.43
BLM10	YFL007W	URN1	Q06525	465 aa	Known RBP	6.14	□□□□□ -1.43
BLM10	YFL007W	SIS2	P36024	562 aa		6.12	□□□□□ -1.43
BLM10	YFL007W	ASF1	P32447	279 aa		6.11	□□□□□ -1.43
BLM10	YFL007W	LEU3	P08638	886 aa		6.11	□□□□□ -1.43
BLM10	YFL007W	HSP82	P02829	709 aa	Known RBP	6.1	□□□□□ -1.43
BLM10	YFL007W	RPS0A	P32905	252 aa	Known RBP	6.06	□□□□□ -1.44
BLM10	YFL007W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	6.04	□□□□□ -1.44	not detected
BLM10	YFL007W	PSH1	Q12161	406 aa		6.04	□□□□□ -1.44
BLM10	YFL007W	SAS10	Q12136	610 aa	Predicted RBP	6.03	□□□□□ -1.44
BLM10	YFL007W	YFR016C	P43597	1233 aa	Known RBP	6.01	□□□□□ -1.45
BLM10	YFL007W	AVT3	P36062	692 aa		6	□□□□□ -1.45
BLM10	YFL007W	HSC82	P15108	705 aa	Known RBP	5.98	□□□□□ -1.45
BLM10	YFL007W	DIP2	Q12220	943 aa	Predicted RBP	5.98	□□□□□ -1.45
BLM10	YFL007W	KRI1	P42846	591 aa	Known RBP	5.98	□□□□□ -1.45
BLM10	YFL007W	SPT2	P06843	333 aa	Predicted RBP	5.97	□□□□□ -1.45
BLM10	YFL007W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	5.97	□□□□□ -1.45	not detected
BLM10	YFL007W	RLP24	Q07915	199 aa	Known RBP	5.97	□□□□□ -1.45
BLM10	YFL007W	DOS2	P54858	310 aa		5.96	□□□□□ -1.46
BLM10	YFL007W	SGS1	P35187	1447 aa		5.95	□□□□□ -1.46
BLM10	YFL007W	SUB1	P54000	292 aa	Known RBP	5.95	□□□□□ -1.46
BLM10	YFL007W	RPN1	P38764	993 aa	Known RBP	5.9	□□□□□ -1.47
BLM10	YFL007W	IFH1	P39520	1085 aa		5.9	□□□□□ -1.47
BLM10	YFL007W	OSW7	P43611	510 aa		5.89	□□□□□ -1.47
BLM10	YFL007W	SNU71	P53207	620 aa	Known RBP	5.89	□□□□□ -1.47
BLM10	YFL007W	TOA1	P32773	286 aa		5.89	□□□□□ -1.47
BLM10	YFL007W	RLF2	Q12495	606 aa		5.89	□□□□□ -1.47
BLM10	YFL007W	INO80	P53115	1489 aa		5.87	□□□□□ -1.47
BLM10	YFL007W	VPS72	Q03388	795 aa		5.86	□□□□□ -1.47
BLM10	YFL007W	FPR4	Q06205	392 aa	Predicted RBP	5.86	□□□□□ -1.47
BLM10	YFL007W	MFT1	P33441	392 aa	Known RBP	5.85	□□□□□ -1.47
BLM10	YFL007W	PLP2	Q12017	286 aa		5.85	□□□□□ -1.47
BLM10	YFL007W	ORC1	P54784	914 aa	Predicted RBP	5.85	□□□□□ -1.47
BLM10	YFL007W	HGH1	P48362	394 aa	Known RBP	5.84	□□□□□ -1.47
BLM10	YFL007W	NOP58	Q12499	511 aa	Known RBP	5.83	□□□□□ -1.48
BLM10	YFL007W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	5.83	□□□□□ -1.48	not detected
BLM10	YFL007W	HOS4	P40480	1083 aa		5.81	□□□□□ -1.48
BLM10	YFL007W	YMR124W	P39523	943 aa	Known RBP	5.8	□□□□□ -1.48
BLM10	YFL007W	ENP1	P38333	483 aa	Known RBP	5.79	□□□□□ -1.48
BLM10	YFL007W	EAF7	P53911	425 aa	Known RBP	5.79	□□□□□ -1.48
BLM10	YFL007W	GIN4	Q12263	1142 aa		5.77	□□□□□ -1.49
BLM10	YFL007W	YGL081W	P53156	320 aa		5.77	□□□□□ -1.49
BLM10	YFL007W	COG8	Q04632	607 aa		5.76	□□□□□ -1.49
BLM10	YFL007W	NST1	P53935	1240 aa		5.75	□□□□□ -1.49
BLM10	YFL007W	DPB3	P27344	201 aa		5.74	□□□□□ -1.49
BLM10	YFL007W	DMA1	P38823	416 aa		5.73	□□□□□ -1.49
BLM10	YFL007W	TCB3	Q03640	1545 aa	Known RBP	5.72	□□□□□ -1.49
BLM10	YFL007W	SPA2	P23201	1466 aa	Known RBP	5.71	□□□□□ -1.49
BLM10	YFL007W	TCB2	P48231	1178 aa		5.71	□□□□□ -1.49
BLM10	YFL007W	NNF2	P53253	936 aa		5.71	□□□□□ -1.49
BLM10	YFL007W	YTA6	P40328	754 aa		5.71	□□□□□ -1.5
BLM10	YFL007W	NOP7	P53261	605 aa	Known RBP	5.71	□□□□□ -1.5
BLM10	YFL007W	NMD2	P38798	1089 aa	Known RBP	5.7	□□□□□ -1.5
BLM10	YFL007W	MSH4	P40965	878 aa	Predicted RBP	5.7	□□□□□ -1.5
BLM10	YFL007W	YSH1	Q06224	779 aa	Predicted RBP	5.7	□□□□□ -1.5
BLM10	YFL007W	ESF2	P53743	316 aa	Known RBP	5.69	□□□□□ -1.5
BLM10	YFL007W	CWC22	P53333	577 aa	Known RBP	5.68	□□□□□ -1.5
BLM10	YFL007W	NOP8	Q08287	484 aa	Predicted RBP	5.68	□□□□□ -1.5
BLM10	YFL007W	HIF1	Q12373	385 aa		5.68	□□□□□ -1.5
BLM10	YFL007W	SWD1	P39706	426 aa		5.68	□□□□□ -1.5
BLM10	YFL007W	CKB1	P43639	278 aa		5.68	□□□□□ -1.5
BLM10	YFL007W	IOC4	Q04213	475 aa		5.67	□□□□□ -1.5
BLM10	YFL007W	NUG1	P40010	520 aa	Known RBP	5.66	□□□□□ -1.5
BLM10	YFL007W	SCT1	P32784	759 aa		5.66	□□□□□ -1.5
BLM10	YFL007W	CDC11	P32458	415 aa		5.65	□□□□□ -1.5
BLM10	YFL007W	PET111	P08468	800 aa		5.64	□□□□□ -1.51
BLM10	YFL007W	SEC27	P41811	889 aa	Known RBP	5.64	□□□□□ -1.51
BLM10	YFL007W	SSN2	P38931	1420 aa		5.63	□□□□□ -1.51
BLM10	YFL007W	SVF1	Q05515	481 aa		5.63	□□□□□ -1.51
BLM10	YFL007W	GLE1	Q12315	538 aa		5.63	□□□□□ -1.51
BLM10	YFL007W	LTV1	P34078	463 aa		5.63	□□□□□ -1.51
BLM10	YFL007W	CEF1	Q03654	590 aa	Predicted RBP	5.62	□□□□□ -1.51
BLM10	YFL007W	YLR257W	Q06146	321 aa	Known RBP	5.62	□□□□□ -1.51
BLM10	YFL007W	EFB1	P32471	206 aa	Known RBP	5.62	□□□□□ -1.51
BLM10	YFL007W	PIL1	P53252	339 aa	Known RBP	5.6	□□□□□ -1.51
BLM10	YFL007W	SPB4	P25808	606 aa	Predicted RBP	5.6	□□□□□ -1.51
BLM10	YFL007W	RPC37	P36121	282 aa		5.6	□□□□□ -1.51
BLM10	YFL007W	NOP53	Q12080	455 aa	Known RBP	5.6	□□□□□ -1.51
BLM10	YFL007W	SPT7	P35177	1332 aa		5.6	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms