RNA–Protein interactions for RNA: YDR225W

HTA1, Transcript of Histone H2A, yeastyeast

Gene HTA1, Length 399 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTA1YDR225W MTC1P47018 478 aaKnown RBP9.31□□□□□ -0.92
HTA1YDR225W DRS1P32892 752 aaKnown RBP8.83□□□□□ -1
HTA1YDR225W FAP1P53971 965 aa8.28□□□□□ -1.08
HTA1YDR225W PRI1P10363 409 aa7.79□□□□□ -1.16
HTA1YDR225W PRY3P47033 881 aa7.78□□□□□ -1.16
HTA1YDR225W AAD16Q02895 342 aa7.72□□□□□ -1.17
HTA1YDR225W ISW2Q08773 1120 aa7.68□□□□□ -1.18
HTA1YDR225W DIP2Q12220 943 aaPredicted RBP7.68□□□□□ -1.18
HTA1YDR225W RPG1P38249 964 aaKnown RBP7.62□□□□□ -1.19
HTA1YDR225W BFR2Q06631 534 aaKnown RBP7.59□□□□□ -1.19
HTA1YDR225W TFA1P36100 482 aa7.52□□□□□ -1.21
HTA1YDR225W AVT3P36062 692 aa7.44□□□□□ -1.22
HTA1YDR225W TSR3Q12094 313 aaKnown RBP7.4□□□□□ -1.22
HTA1YDR225W RSE1Q04693 1361 aaKnown RBP7.39□□□□□ -1.23
HTA1YDR225W YCK3P39962 524 aa7.37□□□□□ -1.23
HTA1YDR225W HAA1Q12753 694 aaKnown RBP7.26□□□□□ -1.25
HTA1YDR225W RPL17AP05740 184 aaKnown RBP7.18□□□□□ -1.26
HTA1YDR225W RPL17BP46990 184 aaKnown RBP7.18□□□□□ -1.26
HTA1YDR225W REB1P21538 810 aa7.12□□□□□ -1.27
HTA1YDR225W MRPL32P25348 183 aa7.07□□□□□ -1.28
HTA1YDR225W RQC2Q12532 1038 aaKnown RBP6.9□□□□□ -1.3
HTA1YDR225W SPT21P35209 758 aa6.86□□□□□ -1.31
HTA1YDR225W YKR023WP36119 530 aaKnown RBP6.77□□□□□ -1.33
HTA1YDR225W CDC27P38042 758 aa6.77□□□□□ -1.33
HTA1YDR225W YGL015CP33199 130 aa6.73□□□□□ -1.33
HTA1YDR225W HOP09932 586 aa6.65□□□□□ -1.34
HTA1YDR225W DCD1P06773 312 aa6.64□□□□□ -1.35
HTA1YDR225W RIM101P33400 625 aa6.63□□□□□ -1.35
HTA1YDR225W TFC8Q12308 588 aa6.63□□□□□ -1.35
HTA1YDR225W MAP2P38174 421 aaKnown RBP6.54□□□□□ -1.36
HTA1YDR225W UBP10P53874 792 aaPredicted RBP6.5□□□□□ -1.37
HTA1YDR225W OXP1P28273 1286 aa6.44□□□□□ -1.38
HTA1YDR225W SCY1P53009 804 aa6.43□□□□□ -1.38
HTA1YDR225W BCH2P36122 765 aa6.42□□□□□ -1.38
HTA1YDR225W DMA1P38823 416 aa6.39□□□□□ -1.39
HTA1YDR225W SLX5P32828 619 aaKnown RBP6.32□□□□□ -1.4
HTA1YDR225W PTP3P40048 928 aa6.32□□□□□ -1.4
HTA1YDR225W YIL055CP40523 627 aaKnown RBP6.32□□□□□ -1.4
HTA1YDR225W TAF7Q05021 590 aa6.32□□□□□ -1.4
HTA1YDR225W YAH1Q12184 172 aaKnown RBP6.28□□□□□ -1.4
HTA1YDR225W EPS1P40557 701 aa6.26□□□□□ -1.41
HTA1YDR225W TIF4632P39936 914 aaKnown RBP6.25□□□□□ -1.41
HTA1YDR225W BDF1P35817 686 aa6.24□□□□□ -1.41
HTA1YDR225W RSM7P47150 247 aa6.23□□□□□ -1.41
HTA1YDR225W TGL3P40308 642 aa6.22□□□□□ -1.41
HTA1YDR225W AI2P03876 854 aa6.17□□□□□ -1.42
HTA1YDR225W YLR271WQ06152 274 aa6.16□□□□□ -1.42
HTA1YDR225W BBC1P47068 1157 aa6.15□□□□□ -1.42
HTA1YDR225W BUD31P25337 157 aaPredicted RBP6.13□□□□□ -1.43
HTA1YDR225W LEO1P38439 464 aa6.11□□□□□ -1.43
HTA1YDR225W SSP1P38871 571 aa6.1□□□□□ -1.43
HTA1YDR225W PSD2P53037 1138 aaKnown RBP6.05□□□□□ -1.44
HTA1YDR225W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.03□□□□□ -1.44not detected
HTA1YDR225W UBP9P39967 754 aa5.98□□□□□ -1.45
HTA1YDR225W MST1P07236 462 aa5.97□□□□□ -1.45
HTA1YDR225W MRM1P25270 412 aa5.97□□□□□ -1.45
HTA1YDR225W CST9Q06032 482 aa5.97□□□□□ -1.45
HTA1YDR225W NSR1P27476 414 aaKnown RBP RIP-Chip data5.96□□□□□ -1.46not detected
HTA1YDR225W YOR238WQ08634 303 aa5.96□□□□□ -1.46
HTA1YDR225W YAP5P40574 245 aa5.94□□□□□ -1.46
HTA1YDR225W MGA2P40578 1113 aa5.93□□□□□ -1.46
HTA1YDR225W SAS10Q12136 610 aaPredicted RBP5.89□□□□□ -1.47
HTA1YDR225W YBL029C-AQ3E756 94 aa5.89□□□□□ -1.47
HTA1YDR225W LEU3P08638 886 aa5.88□□□□□ -1.47
HTA1YDR225W PIB1Q06651 286 aa5.87□□□□□ -1.47
HTA1YDR225W SIS1P25294 352 aaKnown RBP5.86□□□□□ -1.47
HTA1YDR225W WSC3Q12215 556 aa5.84□□□□□ -1.47
HTA1YDR225W RTG3P38165 486 aa5.82□□□□□ -1.48
HTA1YDR225W RCR1P38212 213 aa5.82□□□□□ -1.48
HTA1YDR225W VPS29P38759 282 aa5.82□□□□□ -1.48
HTA1YDR225W VNX1P42839 908 aa5.82□□□□□ -1.48
HTA1YDR225W GTT3P39996 337 aa5.81□□□□□ -1.48
HTA1YDR225W YFR006WP43590 535 aa5.79□□□□□ -1.48
HTA1YDR225W DBP1P24784 617 aaKnown RBP5.78□□□□□ -1.48
HTA1YDR225W YMR1P47147 688 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
HTA1YDR225W STS1P38637 319 aa5.77□□□□□ -1.49
HTA1YDR225W SPP1Q03012 353 aa5.76□□□□□ -1.49
HTA1YDR225W TIF11P38912 153 aaKnown RBP5.72□□□□□ -1.49
HTA1YDR225W RPN1P38764 993 aaKnown RBP5.7□□□□□ -1.5
HTA1YDR225W VMA1P17255 1071 aaKnown RBP5.69□□□□□ -1.5
HTA1YDR225W SET4P42948 560 aa5.68□□□□□ -1.5
HTA1YDR225W YOL036WQ08206 761 aa5.68□□□□□ -1.5
HTA1YDR225W ULI1P43604 169 aa5.67□□□□□ -1.5
HTA1YDR225W DMA2P53924 522 aa5.67□□□□□ -1.5
HTA1YDR225W RAM2P29703 316 aa5.66□□□□□ -1.5
HTA1YDR225W MSB4Q12317 492 aa5.65□□□□□ -1.5
HTA1YDR225W SAM3Q08986 587 aa5.64□□□□□ -1.51
HTA1YDR225W IOC2Q12072 812 aa5.64□□□□□ -1.51
HTA1YDR225W LDB19Q12502 818 aa5.64□□□□□ -1.51
HTA1YDR225W FKH1P40466 484 aa5.62□□□□□ -1.51
HTA1YDR225W TRP5P00931 707 aaKnown RBP5.61□□□□□ -1.51
HTA1YDR225W EAP1P36041 632 aaKnown RBP5.61□□□□□ -1.51
HTA1YDR225W AIR2Q12476 344 aaKnown RBP5.61□□□□□ -1.51
HTA1YDR225W MAK11P20484 414 aaKnown RBP5.6□□□□□ -1.51
HTA1YDR225W SPB4P25808 606 aaPredicted RBP5.59□□□□□ -1.51
HTA1YDR225W MIF2P35201 549 aa5.58□□□□□ -1.52
HTA1YDR225W CKB1P43639 278 aa5.58□□□□□ -1.52
HTA1YDR225W GYP5Q12344 894 aa5.58□□□□□ -1.52
HTA1YDR225W SET1P38827 1080 aaKnown RBP5.57□□□□□ -1.52
HTA1YDR225W EDS1P38073 919 aa5.56□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms