RNA–Protein interactions for RNA: YDR170W-A

YDR170W-A, Transcript of Retrotransposon TYA Gag gene, yeastyeast

Gene YDR170W-A, Length 1,323 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR170W-AYDR170W-A MTC1P47018 478 aaKnown RBP16.44■□□□□ 0.22
YDR170W-AYDR170W-A FAP1P53971 965 aa16.38■□□□□ 0.21
YDR170W-AYDR170W-A PRY3P47033 881 aa15.45■□□□□ 0.06
YDR170W-AYDR170W-A AAD16Q02895 342 aa14.73□□□□□ -0.05
YDR170W-AYDR170W-A PRI1P10363 409 aa14.66□□□□□ -0.06
YDR170W-AYDR170W-A YCK3P39962 524 aa14.56□□□□□ -0.08
YDR170W-AYDR170W-A HAA1Q12753 694 aaKnown RBP14.43□□□□□ -0.1
YDR170W-AYDR170W-A ISW2Q08773 1120 aa13.92□□□□□ -0.18
YDR170W-AYDR170W-A DRS1P32892 752 aaKnown RBP13.9□□□□□ -0.19
YDR170W-AYDR170W-A RPG1P38249 964 aaKnown RBP13.82□□□□□ -0.2
YDR170W-AYDR170W-A TSR3Q12094 313 aaKnown RBP13.76□□□□□ -0.21
YDR170W-AYDR170W-A MRPL32P25348 183 aa13.23□□□□□ -0.29
YDR170W-AYDR170W-A YGL015CP33199 130 aa13.1□□□□□ -0.31
YDR170W-AYDR170W-A DIP2Q12220 943 aaPredicted RBP12.7□□□□□ -0.38
YDR170W-AYDR170W-A RSE1Q04693 1361 aaKnown RBP12.69□□□□□ -0.38
YDR170W-AYDR170W-A BUD31P25337 157 aaPredicted RBP12.64□□□□□ -0.39
YDR170W-AYDR170W-A REB1P21538 810 aa12.45□□□□□ -0.42
YDR170W-AYDR170W-A RPL17AP05740 184 aaKnown RBP12.37□□□□□ -0.43
YDR170W-AYDR170W-A RPL17BP46990 184 aaKnown RBP12.37□□□□□ -0.43
YDR170W-AYDR170W-A CDC27P38042 758 aa12.32□□□□□ -0.44
YDR170W-AYDR170W-A UBP10P53874 792 aaPredicted RBP12.18□□□□□ -0.46
YDR170W-AYDR170W-A MAP2P38174 421 aaKnown RBP12.11□□□□□ -0.47
YDR170W-AYDR170W-A YKR023WP36119 530 aaKnown RBP11.94□□□□□ -0.5
YDR170W-AYDR170W-A SIS1P25294 352 aaKnown RBP11.88□□□□□ -0.51
YDR170W-AYDR170W-A AVT3P36062 692 aa11.86□□□□□ -0.51
YDR170W-AYDR170W-A SPT21P35209 758 aa11.76□□□□□ -0.53
YDR170W-AYDR170W-A UBP9P39967 754 aa11.73□□□□□ -0.53
YDR170W-AYDR170W-A TFC8Q12308 588 aa11.7□□□□□ -0.54
YDR170W-AYDR170W-A TIF4632P39936 914 aaKnown RBP11.69□□□□□ -0.54
YDR170W-AYDR170W-A DCD1P06773 312 aa11.68□□□□□ -0.54
YDR170W-AYDR170W-A HOP09932 586 aa11.68□□□□□ -0.54
YDR170W-AYDR170W-A TGL3P40308 642 aa11.66□□□□□ -0.54
YDR170W-AYDR170W-A SCY1P53009 804 aa11.6□□□□□ -0.55
YDR170W-AYDR170W-A SLX5P32828 619 aaKnown RBP11.55□□□□□ -0.56
YDR170W-AYDR170W-A BCH2P36122 765 aa11.26□□□□□ -0.61
YDR170W-AYDR170W-A YBL029C-AQ3E756 94 aa11.04□□□□□ -0.64
YDR170W-AYDR170W-A MST1P07236 462 aa11.02□□□□□ -0.65
YDR170W-AYDR170W-A RIM101P33400 625 aa11.02□□□□□ -0.65
YDR170W-AYDR170W-A YOR238WQ08634 303 aa10.88□□□□□ -0.67
YDR170W-AYDR170W-A BDF1P35817 686 aa10.87□□□□□ -0.67
YDR170W-AYDR170W-A EPS1P40557 701 aa10.87□□□□□ -0.67
YDR170W-AYDR170W-A BFR2Q06631 534 aaKnown RBP10.87□□□□□ -0.67
YDR170W-AYDR170W-A VNX1P42839 908 aa10.86□□□□□ -0.67
YDR170W-AYDR170W-A NSR1P27476 414 aaKnown RBP RIP-Chip data10.75□□□□□ -0.69not detected
YDR170W-AYDR170W-A SPP1Q03012 353 aa10.75□□□□□ -0.69
YDR170W-AYDR170W-A AIR2Q12476 344 aaKnown RBP10.7□□□□□ -0.7
YDR170W-AYDR170W-A YJL171CP46992 396 aa10.67□□□□□ -0.7
YDR170W-AYDR170W-A FKH1P40466 484 aa10.64□□□□□ -0.71
YDR170W-AYDR170W-A WSC3Q12215 556 aa10.64□□□□□ -0.71
YDR170W-AYDR170W-A YAP5P40574 245 aa10.61□□□□□ -0.71
YDR170W-AYDR170W-A OXP1P28273 1286 aa10.58□□□□□ -0.71
YDR170W-AYDR170W-A TIF11P38912 153 aaKnown RBP10.57□□□□□ -0.72
YDR170W-AYDR170W-A PTP3P40048 928 aa10.49□□□□□ -0.73
YDR170W-AYDR170W-A YIL055CP40523 627 aaKnown RBP10.44□□□□□ -0.74
YDR170W-AYDR170W-A BBC1P47068 1157 aa10.43□□□□□ -0.74
YDR170W-AYDR170W-A GTT3P39996 337 aa10.41□□□□□ -0.74
YDR170W-AYDR170W-A BMT6Q12291 365 aa10.41□□□□□ -0.74
YDR170W-AYDR170W-A LDB19Q12502 818 aa10.41□□□□□ -0.74
YDR170W-AYDR170W-A ULI1P43604 169 aa10.34□□□□□ -0.75
YDR170W-AYDR170W-A IOC2Q12072 812 aa10.33□□□□□ -0.76
YDR170W-AYDR170W-A AI2P03876 854 aa10.33□□□□□ -0.76
YDR170W-AYDR170W-A RSM7P47150 247 aa10.3□□□□□ -0.76
YDR170W-AYDR170W-A PIB1Q06651 286 aa10.14□□□□□ -0.79
YDR170W-AYDR170W-A MSB4Q12317 492 aa10.14□□□□□ -0.79
YDR170W-AYDR170W-A EAP1P36041 632 aaKnown RBP10.11□□□□□ -0.79
YDR170W-AYDR170W-A RTG1P32607 177 aa10.09□□□□□ -0.79
YDR170W-AYDR170W-A YAH1Q12184 172 aaKnown RBP10.07□□□□□ -0.8
YDR170W-AYDR170W-A NCR1Q12200 1170 aa10.06□□□□□ -0.8
YDR170W-AYDR170W-A TRP5P00931 707 aaKnown RBP10.01□□□□□ -0.81
YDR170W-AYDR170W-A YOL036WQ08206 761 aa9.99□□□□□ -0.81
YDR170W-AYDR170W-A SEC61P32915 480 aa9.97□□□□□ -0.81
YDR170W-AYDR170W-A SET4P42948 560 aa9.97□□□□□ -0.81
YDR170W-AYDR170W-A YNL035CP53962 389 aaKnown RBP9.96□□□□□ -0.82
YDR170W-AYDR170W-A PSD2P53037 1138 aaKnown RBP9.9□□□□□ -0.82
YDR170W-AYDR170W-A BCK2P33306 851 aa9.88□□□□□ -0.83
YDR170W-AYDR170W-A MRM1P25270 412 aa9.87□□□□□ -0.83
YDR170W-AYDR170W-A YLR271WQ06152 274 aa9.86□□□□□ -0.83
YDR170W-AYDR170W-A TFG1P41895 735 aaPredicted RBP9.82□□□□□ -0.84
YDR170W-AYDR170W-A SAP30P38429 201 aa9.79□□□□□ -0.84
YDR170W-AYDR170W-A CHL1P22516 861 aaPredicted RBP9.77□□□□□ -0.85
YDR170W-AYDR170W-A YMR1P47147 688 aaKnown RBP RIP-Chip data9.76□□□□□ -0.85not detected
YDR170W-AYDR170W-A DBP1P24784 617 aaKnown RBP9.75□□□□□ -0.85
YDR170W-AYDR170W-A VMA1P17255 1071 aaKnown RBP9.74□□□□□ -0.85
YDR170W-AYDR170W-A SAM3Q08986 587 aa9.74□□□□□ -0.85
YDR170W-AYDR170W-A DAN4P47179 1161 aa9.73□□□□□ -0.85
YDR170W-AYDR170W-A YDL129WQ07555 291 aa9.7□□□□□ -0.86
YDR170W-AYDR170W-A PRE3P38624 215 aa9.69□□□□□ -0.86
YDR170W-AYDR170W-A VPS29P38759 282 aa9.69□□□□□ -0.86
YDR170W-AYDR170W-A YFR006WP43590 535 aa9.69□□□□□ -0.86
YDR170W-AYDR170W-A JIP4Q03361 876 aa9.69□□□□□ -0.86
YDR170W-AYDR170W-A STS1P38637 319 aa9.63□□□□□ -0.87
YDR170W-AYDR170W-A ABP1P15891 592 aaKnown RBP9.58□□□□□ -0.88
YDR170W-AYDR170W-A XDJ1P39102 459 aa9.57□□□□□ -0.88
YDR170W-AYDR170W-A RTG3P38165 486 aa9.56□□□□□ -0.88
YDR170W-AYDR170W-A HTA1P04911 132 aaKnown RBP9.53□□□□□ -0.88
YDR170W-AYDR170W-A HTA2P04912 132 aa9.53□□□□□ -0.88
YDR170W-AYDR170W-A RGA2Q06407 1009 aa9.53□□□□□ -0.88
YDR170W-AYDR170W-A GYP5Q12344 894 aa9.53□□□□□ -0.88
YDR170W-AYDR170W-A VRP1P37370 817 aa9.52□□□□□ -0.89
YDR170W-AYDR170W-A PTC4P38089 393 aa9.51□□□□□ -0.89
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms