RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeastyeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC1YDR164C FAP1P53971 965 aa6.78□□□□□ -1.32
SEC1YDR164C PRY3P47033 881 aa6.38□□□□□ -1.39
SEC1YDR164C MTC1P47018 478 aaKnown RBP6.07□□□□□ -1.44
SEC1YDR164C HAA1Q12753 694 aaKnown RBP5.94□□□□□ -1.46
SEC1YDR164C BUD31P25337 157 aaPredicted RBP5.57□□□□□ -1.52
SEC1YDR164C AAD16Q02895 342 aa5.47□□□□□ -1.53
SEC1YDR164C YCK3P39962 524 aa5.42□□□□□ -1.54
SEC1YDR164C PRI1P10363 409 aa5.42□□□□□ -1.54
SEC1YDR164C SIS1P25294 352 aaKnown RBP5.3□□□□□ -1.56
SEC1YDR164C ISW2Q08773 1120 aa5.17□□□□□ -1.58
SEC1YDR164C DRS1P32892 752 aaKnown RBP5.16□□□□□ -1.58
SEC1YDR164C RPG1P38249 964 aaKnown RBP5.14□□□□□ -1.59
SEC1YDR164C TSR3Q12094 313 aaKnown RBP5.13□□□□□ -1.59
SEC1YDR164C YGL015CP33199 130 aa5.08□□□□□ -1.6
SEC1YDR164C MRPL32P25348 183 aa4.92□□□□□ -1.62
SEC1YDR164C UBP9P39967 754 aa4.79□□□□□ -1.64
SEC1YDR164C DIP2Q12220 943 aaPredicted RBP4.71□□□□□ -1.65
SEC1YDR164C RSE1Q04693 1361 aaKnown RBP4.71□□□□□ -1.66
SEC1YDR164C REB1P21538 810 aa4.64□□□□□ -1.67
SEC1YDR164C RPL17AP05740 184 aaKnown RBP4.61□□□□□ -1.67
SEC1YDR164C RPL17BP46990 184 aaKnown RBP4.61□□□□□ -1.67
SEC1YDR164C CDC27P38042 758 aa4.57□□□□□ -1.68
SEC1YDR164C MAP2P38174 421 aaKnown RBP4.49□□□□□ -1.69
SEC1YDR164C UBP10P53874 792 aaPredicted RBP4.48□□□□□ -1.69
SEC1YDR164C RGA2Q06407 1009 aa4.44□□□□□ -1.7
SEC1YDR164C YKR023WP36119 530 aaKnown RBP4.41□□□□□ -1.7
SEC1YDR164C DCD1P06773 312 aa4.36□□□□□ -1.71
SEC1YDR164C HOP09932 586 aa4.36□□□□□ -1.71
SEC1YDR164C AVT3P36062 692 aa4.35□□□□□ -1.71
SEC1YDR164C TIF4632P39936 914 aaKnown RBP4.33□□□□□ -1.72
SEC1YDR164C SPT21P35209 758 aa4.32□□□□□ -1.72
SEC1YDR164C SCY1P53009 804 aa4.32□□□□□ -1.72
SEC1YDR164C TFC8Q12308 588 aa4.32□□□□□ -1.72
SEC1YDR164C TGL3P40308 642 aa4.3□□□□□ -1.72
SEC1YDR164C SLX5P32828 619 aaKnown RBP4.29□□□□□ -1.72
SEC1YDR164C YJL171CP46992 396 aa4.19□□□□□ -1.74
SEC1YDR164C BCH2P36122 765 aa4.16□□□□□ -1.74
SEC1YDR164C YBL029C-AQ3E756 94 aa4.1□□□□□ -1.75
SEC1YDR164C RIM101P33400 625 aa4.05□□□□□ -1.76
SEC1YDR164C BFR2Q06631 534 aaKnown RBP4.04□□□□□ -1.76
SEC1YDR164C MST1P07236 462 aa4.03□□□□□ -1.76
SEC1YDR164C EPS1P40557 701 aa4.03□□□□□ -1.76
SEC1YDR164C YOR238WQ08634 303 aa4.03□□□□□ -1.76
SEC1YDR164C BDF1P35817 686 aa4.02□□□□□ -1.77
SEC1YDR164C VNX1P42839 908 aa4.02□□□□□ -1.77
SEC1YDR164C SPP1Q03012 353 aa4□□□□□ -1.77
SEC1YDR164C WSC3Q12215 556 aa3.98□□□□□ -1.77
SEC1YDR164C RGA1P39083 1007 aa3.95□□□□□ -1.78
SEC1YDR164C AIR2Q12476 344 aaKnown RBP3.95□□□□□ -1.78
SEC1YDR164C YAP5P40574 245 aa3.92□□□□□ -1.78
SEC1YDR164C NSR1P27476 414 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
SEC1YDR164C PTP3P40048 928 aa3.92□□□□□ -1.78
SEC1YDR164C FKH1P40466 484 aa3.92□□□□□ -1.78
SEC1YDR164C OXP1P28273 1286 aa3.91□□□□□ -1.78
SEC1YDR164C TIF11P38912 153 aaKnown RBP3.9□□□□□ -1.78
SEC1YDR164C GTT3P39996 337 aa3.89□□□□□ -1.79
SEC1YDR164C YIL055CP40523 627 aaKnown RBP3.89□□□□□ -1.79
SEC1YDR164C BBC1P47068 1157 aa3.87□□□□□ -1.79
SEC1YDR164C BMT6Q12291 365 aa3.86□□□□□ -1.79
SEC1YDR164C LDB19Q12502 818 aa3.86□□□□□ -1.79
SEC1YDR164C ULI1P43604 169 aa3.84□□□□□ -1.79
SEC1YDR164C AI2P03876 854 aa3.82□□□□□ -1.8
SEC1YDR164C RSM7P47150 247 aa3.81□□□□□ -1.8
SEC1YDR164C IOC2Q12072 812 aa3.8□□□□□ -1.8
SEC1YDR164C PIB1Q06651 286 aa3.8□□□□□ -1.8
SEC1YDR164C YAH1Q12184 172 aaKnown RBP3.77□□□□□ -1.81
SEC1YDR164C RTG1P32607 177 aa3.74□□□□□ -1.81
SEC1YDR164C EAP1P36041 632 aaKnown RBP3.73□□□□□ -1.81
SEC1YDR164C NCR1Q12200 1170 aa3.72□□□□□ -1.81
SEC1YDR164C MSB4Q12317 492 aa3.72□□□□□ -1.81
SEC1YDR164C SET4P42948 560 aa3.71□□□□□ -1.82
SEC1YDR164C TRP5P00931 707 aaKnown RBP3.7□□□□□ -1.82
SEC1YDR164C YOL036WQ08206 761 aa3.69□□□□□ -1.82
SEC1YDR164C YNL035CP53962 389 aaKnown RBP3.68□□□□□ -1.82
SEC1YDR164C MRM1P25270 412 aa3.66□□□□□ -1.82
SEC1YDR164C SEC61P32915 480 aa3.66□□□□□ -1.82
SEC1YDR164C TFG1P41895 735 aaPredicted RBP3.66□□□□□ -1.82
SEC1YDR164C BCK2P33306 851 aa3.65□□□□□ -1.83
SEC1YDR164C SAP30P38429 201 aa3.64□□□□□ -1.83
SEC1YDR164C PSD2P53037 1138 aaKnown RBP3.63□□□□□ -1.83
SEC1YDR164C YLR271WQ06152 274 aa3.63□□□□□ -1.83
SEC1YDR164C DBP1P24784 617 aaKnown RBP3.61□□□□□ -1.83
SEC1YDR164C YFR006WP43590 535 aa3.61□□□□□ -1.83
SEC1YDR164C YMR1P47147 688 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
SEC1YDR164C CHL1P22516 861 aaPredicted RBP3.59□□□□□ -1.83
SEC1YDR164C VMA1P17255 1071 aaKnown RBP3.59□□□□□ -1.84
SEC1YDR164C YDL129WQ07555 291 aa3.58□□□□□ -1.84
SEC1YDR164C PRE3P38624 215 aa3.57□□□□□ -1.84
SEC1YDR164C VPS29P38759 282 aa3.56□□□□□ -1.84
SEC1YDR164C DAN4P47179 1161 aa3.56□□□□□ -1.84
SEC1YDR164C SAM3Q08986 587 aa3.56□□□□□ -1.84
SEC1YDR164C JIP4Q03361 876 aa3.56□□□□□ -1.84
SEC1YDR164C STS1P38637 319 aa3.55□□□□□ -1.84
SEC1YDR164C RTG3P38165 486 aa3.53□□□□□ -1.84
SEC1YDR164C VRP1P37370 817 aa3.53□□□□□ -1.84
SEC1YDR164C GYP5Q12344 894 aa3.53□□□□□ -1.84
SEC1YDR164C DCW1P36091 449 aa3.52□□□□□ -1.85
SEC1YDR164C HTA1P04911 132 aaKnown RBP3.52□□□□□ -1.85
SEC1YDR164C HTA2P04912 132 aa3.52□□□□□ -1.85
SEC1YDR164C XDJ1P39102 459 aa3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms