RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W DRS1P32892 752 aaKnown RBP10.39□□□□□ -0.75
FOB1YDR110W TFA1P36100 482 aa10.02□□□□□ -0.81
FOB1YDR110W RQC2Q12532 1038 aaKnown RBP9.9□□□□□ -0.82
FOB1YDR110W TAF7Q05021 590 aa9.79□□□□□ -0.84
FOB1YDR110W BFR2Q06631 534 aaKnown RBP9.59□□□□□ -0.87
FOB1YDR110W MTC1P47018 478 aaKnown RBP8.92□□□□□ -0.98
FOB1YDR110W DMA1P38823 416 aa8.84□□□□□ -0.99
FOB1YDR110W LEO1P38439 464 aa8.75□□□□□ -1.01
FOB1YDR110W AVT3P36062 692 aa8.68□□□□□ -1.02
FOB1YDR110W URN1Q06525 465 aaKnown RBP8.46□□□□□ -1.05
FOB1YDR110W DIP2Q12220 943 aaPredicted RBP8.37□□□□□ -1.07
FOB1YDR110W IOC4Q04213 475 aa8.32□□□□□ -1.08
FOB1YDR110W NAP1P25293 417 aaKnown RBP8.29□□□□□ -1.08
FOB1YDR110W IFH1P39520 1085 aa8.2□□□□□ -1.1
FOB1YDR110W LEU3P08638 886 aa8.12□□□□□ -1.11
FOB1YDR110W ABP1P15891 592 aaKnown RBP8.11□□□□□ -1.11
FOB1YDR110W AIM44Q99299 758 aa8.11□□□□□ -1.11
FOB1YDR110W DMA2P53924 522 aa8.09□□□□□ -1.11
FOB1YDR110W ORC1P54784 914 aaPredicted RBP8.03□□□□□ -1.12
FOB1YDR110W YRB30P53107 440 aaPredicted RBP7.89□□□□□ -1.15
FOB1YDR110W RLF2Q12495 606 aa7.89□□□□□ -1.15
FOB1YDR110W PTP3P40048 928 aa7.88□□□□□ -1.15
FOB1YDR110W SAS10Q12136 610 aaPredicted RBP7.88□□□□□ -1.15
FOB1YDR110W SNU71P53207 620 aaKnown RBP7.76□□□□□ -1.17
FOB1YDR110W TOP1P04786 769 aa7.75□□□□□ -1.17
FOB1YDR110W RPN1P38764 993 aaKnown RBP7.75□□□□□ -1.17
FOB1YDR110W YML020WQ03722 664 aa7.65□□□□□ -1.18
FOB1YDR110W NOP8Q08287 484 aaPredicted RBP7.6□□□□□ -1.19
FOB1YDR110W YFR016CP43597 1233 aaKnown RBP7.58□□□□□ -1.2
FOB1YDR110W BRL1P38770 471 aa7.57□□□□□ -1.2
FOB1YDR110W CKB1P43639 278 aa7.55□□□□□ -1.2
FOB1YDR110W SIS2P36024 562 aa7.55□□□□□ -1.2
FOB1YDR110W KRI1P42846 591 aaKnown RBP7.55□□□□□ -1.2
FOB1YDR110W SWE1P32944 819 aa7.51□□□□□ -1.21
FOB1YDR110W ATG36P46983 293 aa7.51□□□□□ -1.21
FOB1YDR110W SSP1P38871 571 aa7.49□□□□□ -1.21
FOB1YDR110W MDG1P53885 366 aa7.47□□□□□ -1.21
FOB1YDR110W NUG1P40010 520 aaKnown RBP7.46□□□□□ -1.22
FOB1YDR110W RSE1Q04693 1361 aaKnown RBP7.46□□□□□ -1.22
FOB1YDR110W SLX8P40072 274 aa7.44□□□□□ -1.22
FOB1YDR110W MON2P48563 1636 aaPredicted RBP7.44□□□□□ -1.22
FOB1YDR110W LAM6Q08001 693 aa7.44□□□□□ -1.22
FOB1YDR110W INO80P53115 1489 aa7.43□□□□□ -1.22
FOB1YDR110W NOP7P53261 605 aaKnown RBP7.41□□□□□ -1.22
FOB1YDR110W GIN4Q12263 1142 aa7.39□□□□□ -1.23
FOB1YDR110W TPO2P53283 614 aa7.36□□□□□ -1.23
FOB1YDR110W FAR11P53917 953 aa7.35□□□□□ -1.23
FOB1YDR110W MNN4P36044 1178 aa7.35□□□□□ -1.23
FOB1YDR110W BRN1P38170 754 aa7.35□□□□□ -1.23
FOB1YDR110W MRX12P47084 519 aa7.34□□□□□ -1.23
FOB1YDR110W RPS0BP46654 252 aaKnown RBP7.33□□□□□ -1.24
FOB1YDR110W RTS3P53289 263 aa7.33□□□□□ -1.24
FOB1YDR110W SUB1P54000 292 aaKnown RBP7.33□□□□□ -1.24
FOB1YDR110W VPS72Q03388 795 aa7.33□□□□□ -1.24
FOB1YDR110W SPC42P36094 363 aa7.32□□□□□ -1.24
FOB1YDR110W SPB4P25808 606 aaPredicted RBP7.31□□□□□ -1.24
FOB1YDR110W GEF1P37020 779 aa7.31□□□□□ -1.24
FOB1YDR110W YJR008WP47085 338 aa7.31□□□□□ -1.24
FOB1YDR110W ASF1P32447 279 aa7.3□□□□□ -1.24
FOB1YDR110W PAM1P37304 830 aaKnown RBP7.3□□□□□ -1.24
FOB1YDR110W JSN1P47135 1091 aaKnown RBP RIP-Chip data7.3□□□□□ -1.24not detected
FOB1YDR110W SSA1P10591 642 aaKnown RBP7.28□□□□□ -1.24
FOB1YDR110W CWC22P53333 577 aaKnown RBP7.28□□□□□ -1.24
FOB1YDR110W MAM3Q12296 706 aa7.28□□□□□ -1.24
FOB1YDR110W YTA7P40340 1379 aa7.28□□□□□ -1.24
FOB1YDR110W KIN1P13185 1064 aa7.27□□□□□ -1.25
FOB1YDR110W MET10P39692 1035 aa7.27□□□□□ -1.25
FOB1YDR110W BUD21Q08492 214 aaPredicted RBP7.27□□□□□ -1.25
FOB1YDR110W SSF1P38789 453 aaPredicted RBP7.26□□□□□ -1.25
FOB1YDR110W OSW7P43611 510 aa7.24□□□□□ -1.25
FOB1YDR110W DOS2P54858 310 aa7.24□□□□□ -1.25
FOB1YDR110W EBP2P36049 427 aaKnown RBP7.24□□□□□ -1.25
FOB1YDR110W SUB2Q07478 446 aaKnown RBP7.24□□□□□ -1.25
FOB1YDR110W RIM101P33400 625 aa7.21□□□□□ -1.25
FOB1YDR110W SGS1P35187 1447 aa7.18□□□□□ -1.26
FOB1YDR110W PDR1P12383 1068 aa7.18□□□□□ -1.26
FOB1YDR110W OCA5P38738 679 aa7.18□□□□□ -1.26
FOB1YDR110W TCB3Q03640 1545 aaKnown RBP7.17□□□□□ -1.26
FOB1YDR110W TOA1P32773 286 aa7.17□□□□□ -1.26
FOB1YDR110W RRN6P32786 894 aa7.17□□□□□ -1.26
FOB1YDR110W HGH1P48362 394 aaKnown RBP7.16□□□□□ -1.26
FOB1YDR110W TY1B-DR4Q07793 1604 aa7.15□□□□□ -1.26
FOB1YDR110W HIF1Q12373 385 aa7.15□□□□□ -1.27
FOB1YDR110W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.15□□□□□ -1.27not detected
FOB1YDR110W SWR1Q05471 1514 aa7.14□□□□□ -1.27
FOB1YDR110W RPL17AP05740 184 aaKnown RBP7.13□□□□□ -1.27
FOB1YDR110W ISW1P38144 1129 aa7.13□□□□□ -1.27
FOB1YDR110W GUA1P38625 525 aaKnown RBP7.13□□□□□ -1.27
FOB1YDR110W RPL17BP46990 184 aaKnown RBP7.13□□□□□ -1.27
FOB1YDR110W ZDS1P50111 915 aaKnown RBP7.13□□□□□ -1.27
FOB1YDR110W RLP24Q07915 199 aaKnown RBP7.13□□□□□ -1.27
FOB1YDR110W YAH1Q12184 172 aaKnown RBP7.13□□□□□ -1.27
FOB1YDR110W VPS70P47161 811 aa7.13□□□□□ -1.27
FOB1YDR110W YLR271WQ06152 274 aa7.13□□□□□ -1.27
FOB1YDR110W SLD2P34252 453 aa7.11□□□□□ -1.27
FOB1YDR110W ALD4P46367 519 aaKnown RBP7.11□□□□□ -1.27
FOB1YDR110W YNR021WP53723 404 aaKnown RBP7.11□□□□□ -1.27
FOB1YDR110W UBX5Q06682 500 aa7.1□□□□□ -1.27
FOB1YDR110W OXP1P28273 1286 aa7.1□□□□□ -1.27
FOB1YDR110W DNA2P38859 1522 aa7.09□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms