RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	DRS1	P32892	752 aa	Known RBP	15.57	■□□□□ 0.08
RPN5	YDL147W	MTC1	P47018	478 aa	Known RBP	15.53	■□□□□ 0.08
RPN5	YDL147W	FAP1	P53971	965 aa		14.96	□□□□□ -0.01
RPN5	YDL147W	PRY3	P47033	881 aa		14.11	□□□□□ -0.15
RPN5	YDL147W	BFR2	Q06631	534 aa	Known RBP	13.74	□□□□□ -0.21
RPN5	YDL147W	AAD16	Q02895	342 aa		13.62	□□□□□ -0.23
RPN5	YDL147W	PRI1	P10363	409 aa		13.6	□□□□□ -0.23
RPN5	YDL147W	YCK3	P39962	524 aa		13.37	□□□□□ -0.27
RPN5	YDL147W	TFA1	P36100	482 aa		13.29	□□□□□ -0.28
RPN5	YDL147W	HAA1	Q12753	694 aa	Known RBP	13.16	□□□□□ -0.3
RPN5	YDL147W	DIP2	Q12220	943 aa	Predicted RBP	13.05	□□□□□ -0.32
RPN5	YDL147W	ISW2	Q08773	1120 aa		13.04	□□□□□ -0.32
RPN5	YDL147W	AVT3	P36062	692 aa		12.98	□□□□□ -0.33
RPN5	YDL147W	RPG1	P38249	964 aa	Known RBP	12.95	□□□□□ -0.34
RPN5	YDL147W	TSR3	Q12094	313 aa	Known RBP	12.82	□□□□□ -0.36
RPN5	YDL147W	MRPL32	P25348	183 aa		12.28	□□□□□ -0.44
RPN5	YDL147W	RSE1	Q04693	1361 aa	Known RBP	12.18	□□□□□ -0.46
RPN5	YDL147W	RQC2	Q12532	1038 aa	Known RBP	12.07	□□□□□ -0.48
RPN5	YDL147W	YGL015C	P33199	130 aa		12.03	□□□□□ -0.48
RPN5	YDL147W	REB1	P21538	810 aa		11.78	□□□□□ -0.52
RPN5	YDL147W	RPL17A	P05740	184 aa	Known RBP	11.77	□□□□□ -0.53
RPN5	YDL147W	RPL17B	P46990	184 aa	Known RBP	11.77	□□□□□ -0.53
RPN5	YDL147W	CDC27	P38042	758 aa		11.56	□□□□□ -0.56
RPN5	YDL147W	BUD31	P25337	157 aa	Predicted RBP	11.42	□□□□□ -0.58
RPN5	YDL147W	YKR023W	P36119	530 aa	Known RBP	11.31	□□□□□ -0.6
RPN5	YDL147W	UBP10	P53874	792 aa	Predicted RBP	11.3	□□□□□ -0.6
RPN5	YDL147W	MAP2	P38174	421 aa	Known RBP	11.29	□□□□□ -0.6
RPN5	YDL147W	PTP3	P40048	928 aa		11.25	□□□□□ -0.61
RPN5	YDL147W	SPT21	P35209	758 aa		11.22	□□□□□ -0.61
RPN5	YDL147W	RIM101	P33400	625 aa		11.21	□□□□□ -0.61
RPN5	YDL147W	DMA1	P38823	416 aa		11.2	□□□□□ -0.62
RPN5	YDL147W	HO	P09932	586 aa		11.07	□□□□□ -0.64
RPN5	YDL147W	DCD1	P06773	312 aa		11.06	□□□□□ -0.64
RPN5	YDL147W	TFC8	Q12308	588 aa		11.06	□□□□□ -0.64
RPN5	YDL147W	SSP1	P38871	571 aa		11.02	□□□□□ -0.65
RPN5	YDL147W	SCY1	P53009	804 aa		10.89	□□□□□ -0.67
RPN5	YDL147W	OXP1	P28273	1286 aa		10.86	□□□□□ -0.67
RPN5	YDL147W	YIL055C	P40523	627 aa	Known RBP	10.85	□□□□□ -0.67
RPN5	YDL147W	YAH1	Q12184	172 aa	Known RBP	10.85	□□□□□ -0.67
RPN5	YDL147W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	10.85	□□□□□ -0.67	not detected
RPN5	YDL147W	TIF4632	P39936	914 aa	Known RBP	10.83	□□□□□ -0.68
RPN5	YDL147W	TGL3	P40308	642 aa		10.83	□□□□□ -0.68
RPN5	YDL147W	SLX5	P32828	619 aa	Known RBP	10.79	□□□□□ -0.68
RPN5	YDL147W	SIS1	P25294	352 aa	Known RBP	10.78	□□□□□ -0.68
RPN5	YDL147W	UBP9	P39967	754 aa		10.73	□□□□□ -0.69
RPN5	YDL147W	YLR271W	Q06152	274 aa		10.68	□□□□□ -0.7
RPN5	YDL147W	BCH2	P36122	765 aa		10.67	□□□□□ -0.7
RPN5	YDL147W	RSM7	P47150	247 aa		10.6	□□□□□ -0.71
RPN5	YDL147W	MGA2	P40578	1113 aa		10.58	□□□□□ -0.72
RPN5	YDL147W	TAF7	Q05021	590 aa		10.57	□□□□□ -0.72
RPN5	YDL147W	LEO1	P38439	464 aa		10.53	□□□□□ -0.72
RPN5	YDL147W	AI2	P03876	854 aa		10.37	□□□□□ -0.75
RPN5	YDL147W	CST9	Q06032	482 aa		10.37	□□□□□ -0.75
RPN5	YDL147W	SAS10	Q12136	610 aa	Predicted RBP	10.37	□□□□□ -0.75
RPN5	YDL147W	EPS1	P40557	701 aa		10.33	□□□□□ -0.76
RPN5	YDL147W	BDF1	P35817	686 aa		10.33	□□□□□ -0.76
RPN5	YDL147W	BBC1	P47068	1157 aa		10.33	□□□□□ -0.76
RPN5	YDL147W	PSD2	P53037	1138 aa	Known RBP	10.32	□□□□□ -0.76
RPN5	YDL147W	MST1	P07236	462 aa		10.28	□□□□□ -0.76
RPN5	YDL147W	LEU3	P08638	886 aa		10.28	□□□□□ -0.76
RPN5	YDL147W	YBL029C-A	Q3E756	94 aa		10.26	□□□□□ -0.77
RPN5	YDL147W	YOR238W	Q08634	303 aa		10.17	□□□□□ -0.78
RPN5	YDL147W	VNX1	P42839	908 aa		10.1	□□□□□ -0.79
RPN5	YDL147W	MRM1	P25270	412 aa		10.08	□□□□□ -0.8
RPN5	YDL147W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	10.07	□□□□□ -0.8	not detected
RPN5	YDL147W	RAM2	P29703	316 aa		10.07	□□□□□ -0.8
RPN5	YDL147W	SET1	P38827	1080 aa	Known RBP	10.07	□□□□□ -0.8
RPN5	YDL147W	SPB4	P25808	606 aa	Predicted RBP	10.02	□□□□□ -0.81
RPN5	YDL147W	RTG3	P38165	486 aa		10.02	□□□□□ -0.81
RPN5	YDL147W	RPN1	P38764	993 aa	Known RBP	10.01	□□□□□ -0.81
RPN5	YDL147W	CKB1	P43639	278 aa		10.01	□□□□□ -0.81
RPN5	YDL147W	IFH1	P39520	1085 aa		10	□□□□□ -0.81
RPN5	YDL147W	SPP1	Q03012	353 aa		10	□□□□□ -0.81
RPN5	YDL147W	YAP5	P40574	245 aa		9.99	□□□□□ -0.81
RPN5	YDL147W	VPS70	P47161	811 aa		9.97	□□□□□ -0.81
RPN5	YDL147W	WSC3	Q12215	556 aa		9.96	□□□□□ -0.82
RPN5	YDL147W	RCR1	P38212	213 aa		9.95	□□□□□ -0.82
RPN5	YDL147W	YPR148C	Q06523	435 aa		9.92	□□□□□ -0.82
RPN5	YDL147W	MAK11	P20484	414 aa	Known RBP	9.91	□□□□□ -0.82
RPN5	YDL147W	AIR2	Q12476	344 aa	Known RBP	9.88	□□□□□ -0.83
RPN5	YDL147W	FKH1	P40466	484 aa		9.84	□□□□□ -0.83
RPN5	YDL147W	TIF11	P38912	153 aa	Known RBP	9.83	□□□□□ -0.84
RPN5	YDL147W	YJL171C	P46992	396 aa		9.8	□□□□□ -0.84
RPN5	YDL147W	VPS29	P38759	282 aa		9.79	□□□□□ -0.84
RPN5	YDL147W	DMA2	P53924	522 aa		9.79	□□□□□ -0.84
RPN5	YDL147W	GTT3	P39996	337 aa		9.78	□□□□□ -0.84
RPN5	YDL147W	COQ8	P27697	501 aa		9.77	□□□□□ -0.85
RPN5	YDL147W	PBS2	P08018	668 aa		9.76	□□□□□ -0.85
RPN5	YDL147W	NOP53	Q12080	455 aa	Known RBP	9.75	□□□□□ -0.85
RPN5	YDL147W	DSF2	P38213	736 aa		9.74	□□□□□ -0.85
RPN5	YDL147W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	9.73	□□□□□ -0.85	not detected
RPN5	YDL147W	MIF2	P35201	549 aa		9.71	□□□□□ -0.86
RPN5	YDL147W	LDB19	Q12502	818 aa		9.7	□□□□□ -0.86
RPN5	YDL147W	ULI1	P43604	169 aa		9.67	□□□□□ -0.86
RPN5	YDL147W	IOC2	Q12072	812 aa		9.67	□□□□□ -0.86
RPN5	YDL147W	PIB1	Q06651	286 aa		9.66	□□□□□ -0.86
RPN5	YDL147W	REF2	P42073	533 aa	Predicted RBP	9.64	□□□□□ -0.87
RPN5	YDL147W	YNR021W	P53723	404 aa	Known RBP	9.64	□□□□□ -0.87
RPN5	YDL147W	DBP1	P24784	617 aa	Known RBP	9.63	□□□□□ -0.87
RPN5	YDL147W	MAM3	Q12296	706 aa		9.63	□□□□□ -0.87

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms