RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 CHIC1Q5VXU3 224 aa24.22■■□□□ 1.47
SCARB2-224ENST00000640880 AEBP2Q6ZN18 517 aaPredicted RBP23.89■■□□□ 1.41
SCARB2-224ENST00000640880 PHF23Q9BUL5 403 aaPredicted RBP21.42■■□□□ 1.02
SCARB2-224ENST00000640880 SENP3Q9H4L4 574 aaPredicted RBP20.39■□□□□ 0.85
SCARB2-224ENST00000640880 PLPPR3Q6T4P5 718 aa20.08■□□□□ 0.81
SCARB2-224ENST00000640880 FOXD1Q16676 465 aa19■□□□□ 0.63
SCARB2-224ENST00000640880 ADRA2BP18089 450 aa18.82■□□□□ 0.6
SCARB2-224ENST00000640880 PPP6R1Q9UPN7 881 aa18.6■□□□□ 0.57
SCARB2-224ENST00000640880 KCNA4P22459 653 aa18.51■□□□□ 0.55
SCARB2-224ENST00000640880 EHMT2Q96KQ7 1210 aa18.42■□□□□ 0.54
SCARB2-224ENST00000640880 PPP4R3CPQ6ZMV5 832 aa17.83■□□□□ 0.44
SCARB2-224ENST00000640880 MSH5O43196 834 aa17.8■□□□□ 0.44
SCARB2-224ENST00000640880 PIAS4Q8N2W9 510 aaPredicted RBP17.8■□□□□ 0.44
SCARB2-224ENST00000640880 SLC4A1APQ9BWU0 796 aaKnown RBP17.79■□□□□ 0.44
SCARB2-224ENST00000640880 CSRNP3Q8WYN3 585 aa17.71■□□□□ 0.43
SCARB2-224ENST00000640880 NCBP3Q53F19 620 aaKnown RBP17.62■□□□□ 0.41
SCARB2-224ENST00000640880 POTEDQ86YR6 584 aa17.42■□□□□ 0.38
SCARB2-224ENST00000640880 NPM3O75607 178 aaKnown RBP17.39■□□□□ 0.37
SCARB2-224ENST00000640880 CNKSR2Q8WXI2 1034 aa17.1■□□□□ 0.33
SCARB2-224ENST00000640880 ZBTB22O15209 634 aa17.05■□□□□ 0.32
SCARB2-224ENST00000640880 SCAF1Q9H7N4 1312 aaKnown RBP17.01■□□□□ 0.31
SCARB2-224ENST00000640880 FOXD4L1Q9NU39 408 aa16.74■□□□□ 0.27
SCARB2-224ENST00000640880 DNAJC5BQ9UF47 199 aa16.65■□□□□ 0.26
SCARB2-224ENST00000640880 MAPK8IP2Q13387 824 aaPredicted RBP16.64■□□□□ 0.25
SCARB2-224ENST00000640880 RNF216Q9NWF9 866 aaPredicted RBP16.53■□□□□ 0.24
SCARB2-224ENST00000640880 RTN4Q9NQC3 1192 aaKnown RBP16.22■□□□□ 0.19
SCARB2-224ENST00000640880 HOXD11P31277 338 aaPredicted RBP16.21■□□□□ 0.19
SCARB2-224ENST00000640880 SLC4A2P04920 1241 aa16.19■□□□□ 0.18
SCARB2-224ENST00000640880 AMER1Q5JTC6 1135 aaPredicted RBP16.19■□□□□ 0.18
SCARB2-224ENST00000640880 DMRT2Q9Y5R5 561 aa16.19■□□□□ 0.18
SCARB2-224ENST00000640880 SLC24A1O60721 1099 aa16.18■□□□□ 0.18
SCARB2-224ENST00000640880 ATXN8OSP0DMR3 200 aa16.04■□□□□ 0.16
SCARB2-224ENST00000640880 MYCNP04198 464 aaPredicted RBP16.03■□□□□ 0.16
SCARB2-224ENST00000640880 FKBP8Q14318 412 aa15.98■□□□□ 0.15
SCARB2-224ENST00000640880 DCAF8L1A6NGE4 600 aa15.66■□□□□ 0.1
SCARB2-224ENST00000640880 ATF5Q9Y2D1 282 aaPredicted RBP15.56■□□□□ 0.08
SCARB2-224ENST00000640880 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.49■□□□□ 0.07
SCARB2-224ENST00000640880 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.43■□□□□ 0.06
SCARB2-224ENST00000640880 HNRNPUL2Q1KMD3 747 aaKnown RBP15.43■□□□□ 0.06
SCARB2-224ENST00000640880 SAMD1Q6SPF0 538 aaPredicted RBP15.43■□□□□ 0.06
SCARB2-224ENST00000640880 CACNB1Q02641 598 aaPredicted RBP15.36■□□□□ 0.05
SCARB2-224ENST00000640880 U3KPZ7 1027 aaPredicted RBP15.35■□□□□ 0.05
SCARB2-224ENST00000640880 ZNF219Q9P2Y4 722 aaPredicted RBP15.18■□□□□ 0.02
SCARB2-224ENST00000640880 RNF39Q9H2S5 420 aa15.16■□□□□ 0.02
SCARB2-224ENST00000640880 FBXO3Q9UK99 471 aa15.11■□□□□ 0.01
SCARB2-224ENST00000640880 APLP2Q06481 763 aa15.05■□□□□ -0
SCARB2-224ENST00000640880 SPDYE4A6NLX3 237 aa15.04■□□□□ -0
SCARB2-224ENST00000640880 C1QBPQ07021 282 aaKnown RBP14.95□□□□□ -0.02
SCARB2-224ENST00000640880 MKRN4PQ13434 485 aaPredicted RBP14.93□□□□□ -0.02
SCARB2-224ENST00000640880 PLCB2Q00722 1185 aa14.92□□□□□ -0.02
SCARB2-224ENST00000640880 VASPP50552 380 aaPredicted RBP14.9□□□□□ -0.02
SCARB2-224ENST00000640880 PROM2Q8N271 834 aa14.89□□□□□ -0.03
SCARB2-224ENST00000640880 FBLN2P98095 1184 aa14.83□□□□□ -0.04
SCARB2-224ENST00000640880 DCAF8L2P0C7V8 631 aa14.78□□□□□ -0.04
SCARB2-224ENST00000640880 IFNLR1Q8IU57 520 aaPredicted RBP14.77□□□□□ -0.05
SCARB2-224ENST00000640880 HAP1P54257 671 aaPredicted RBP14.75□□□□□ -0.05
SCARB2-224ENST00000640880 TRHP20396 242 aaPredicted RBP14.72□□□□□ -0.05
SCARB2-224ENST00000640880 POLA2Q14181 598 aa14.67□□□□□ -0.06
SCARB2-224ENST00000640880 SPINK5Q9NQ38 1064 aaPredicted RBP14.66□□□□□ -0.06
SCARB2-224ENST00000640880 PKD2Q13563 968 aa14.64□□□□□ -0.07
SCARB2-224ENST00000640880 CAPN15O75808 1086 aa14.55□□□□□ -0.08
SCARB2-224ENST00000640880 BCANQ96GW7 911 aa14.53□□□□□ -0.08
SCARB2-224ENST00000640880 VSIG10Q8N0Z9 540 aa14.49□□□□□ -0.09
SCARB2-224ENST00000640880 ZBTB12Q9Y330 459 aaPredicted RBP14.46□□□□□ -0.09
SCARB2-224ENST00000640880 KLHL34Q8N239 644 aa14.45□□□□□ -0.1
SCARB2-224ENST00000640880 SPOCK2Q92563 424 aa14.44□□□□□ -0.1
SCARB2-224ENST00000640880 ECM2O94769 699 aaPredicted RBP14.4□□□□□ -0.1
SCARB2-224ENST00000640880 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.4□□□□□ -0.1
SCARB2-224ENST00000640880 ABCB7O75027 752 aa14.38□□□□□ -0.11
SCARB2-224ENST00000640880 PRKCSHP14314 528 aaPredicted RBP14.38□□□□□ -0.11
SCARB2-224ENST00000640880 BBXQ8WY36 941 aaPredicted RBP14.38□□□□□ -0.11
SCARB2-224ENST00000640880 TAOK2Q9UL54 1235 aa14.34□□□□□ -0.11
SCARB2-224ENST00000640880 NPM1P06748 294 aaKnown RBP eCLIP14.32□□□□□ -0.12
SCARB2-224ENST00000640880 PAXIP1Q6ZW49 1069 aaPredicted RBP14.31□□□□□ -0.12
SCARB2-224ENST00000640880 STAG3Q9UJ98 1225 aa14.3□□□□□ -0.12
SCARB2-224ENST00000640880 KDM2AQ9Y2K7 1162 aa14.29□□□□□ -0.12
SCARB2-224ENST00000640880 CFAP44Q96MT7 982 aa14.28□□□□□ -0.12
SCARB2-224ENST00000640880 PLCD3Q8N3E9 789 aa14.27□□□□□ -0.13
SCARB2-224ENST00000640880 ZNF692Q9BU19 519 aaPredicted RBP14.27□□□□□ -0.13
SCARB2-224ENST00000640880 RGL2O15211 777 aa14.23□□□□□ -0.13
SCARB2-224ENST00000640880 DSG3P32926 999 aa14.21□□□□□ -0.13
SCARB2-224ENST00000640880 MIER1Q8N108 512 aa14.17□□□□□ -0.14
SCARB2-224ENST00000640880 SPDYE2BA6NHP3 402 aa14.16□□□□□ -0.14
SCARB2-224ENST00000640880 SPDYE6P0CI01 402 aa14.16□□□□□ -0.14
SCARB2-224ENST00000640880 SPDYE2Q495Y8 402 aa14.16□□□□□ -0.14
SCARB2-224ENST00000640880 OSCARQ8IYS5 282 aa14.16□□□□□ -0.14
SCARB2-224ENST00000640880 TPRNQ4KMQ1 711 aa14.15□□□□□ -0.14
SCARB2-224ENST00000640880 SSUH2Q9Y2M2 353 aa14.15□□□□□ -0.14
SCARB2-224ENST00000640880 SPRYD3Q8NCJ5 442 aa14.14□□□□□ -0.15
SCARB2-224ENST00000640880 PABPN1Q86U42 306 aaKnown RBP eCLIP14.13□□□□□ -0.15
SCARB2-224ENST00000640880 TSHZ2Q9NRE2 1034 aa14.09□□□□□ -0.15
SCARB2-224ENST00000640880 CIZ1Q9ULV3 898 aaPredicted RBP14.08□□□□□ -0.16
SCARB2-224ENST00000640880 CHGAP10645 457 aaKnown RBP14.06□□□□□ -0.16
SCARB2-224ENST00000640880 PLEKHG5O94827 1062 aa14□□□□□ -0.17
SCARB2-224ENST00000640880 ZBTB47Q9UFB7 747 aaPredicted RBP14□□□□□ -0.17
SCARB2-224ENST00000640880 TRIM41Q8WV44 630 aa13.92□□□□□ -0.18
SCARB2-224ENST00000640880 HS6ST3Q8IZP7 471 aa13.89□□□□□ -0.19
SCARB2-224ENST00000640880 NBR1Q14596 966 aa13.86□□□□□ -0.19
SCARB2-224ENST00000640880 DNAJC5Q9H3Z4 198 aa13.85□□□□□ -0.19
SCARB2-224ENST00000640880 RNF25Q96BH1 459 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms