RNA–Protein interactions for RNA: ENST00000630211.2

LINC02246-206, Transcript of long intergenic non-protein coding RNA 2246, humanhuman

TSL 5 BASIC

Gene LINC02246, Length 712 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02246-206ENST00000630211 CHIC1Q5VXU3 224 aa25.76■■□□□ 1.71
LINC02246-206ENST00000630211 AEBP2Q6ZN18 517 aaPredicted RBP25.7■■□□□ 1.7
LINC02246-206ENST00000630211 PHF23Q9BUL5 403 aaPredicted RBP22.9■■□□□ 1.26
LINC02246-206ENST00000630211 SENP3Q9H4L4 574 aaPredicted RBP21.43■■□□□ 1.02
LINC02246-206ENST00000630211 PLPPR3Q6T4P5 718 aa21.21■□□□□ 0.99
LINC02246-206ENST00000630211 ADRA2BP18089 450 aa20.08■□□□□ 0.81
LINC02246-206ENST00000630211 FOXD1Q16676 465 aa19.95■□□□□ 0.78
LINC02246-206ENST00000630211 PPP6R1Q9UPN7 881 aa19.95■□□□□ 0.78
LINC02246-206ENST00000630211 KCNA4P22459 653 aa19.47■□□□□ 0.71
LINC02246-206ENST00000630211 EHMT2Q96KQ7 1210 aa19.1■□□□□ 0.65
LINC02246-206ENST00000630211 PIAS4Q8N2W9 510 aaPredicted RBP18.93■□□□□ 0.62
LINC02246-206ENST00000630211 PPP4R3CPQ6ZMV5 832 aa18.88■□□□□ 0.61
LINC02246-206ENST00000630211 SLC4A1APQ9BWU0 796 aaKnown RBP18.59■□□□□ 0.57
LINC02246-206ENST00000630211 CSRNP3Q8WYN3 585 aa18.55■□□□□ 0.56
LINC02246-206ENST00000630211 NCBP3Q53F19 620 aaKnown RBP18.47■□□□□ 0.55
LINC02246-206ENST00000630211 NPM3O75607 178 aaKnown RBP18.39■□□□□ 0.53
LINC02246-206ENST00000630211 CNKSR2Q8WXI2 1034 aa18.09■□□□□ 0.49
LINC02246-206ENST00000630211 ZBTB22O15209 634 aa18.01■□□□□ 0.47
LINC02246-206ENST00000630211 SCAF1Q9H7N4 1312 aaKnown RBP17.96■□□□□ 0.46
LINC02246-206ENST00000630211 MAPK8IP2Q13387 824 aaPredicted RBP17.89■□□□□ 0.45
LINC02246-206ENST00000630211 MSH5O43196 834 aa17.87■□□□□ 0.45
LINC02246-206ENST00000630211 DNAJC5BQ9UF47 199 aa17.6■□□□□ 0.41
LINC02246-206ENST00000630211 FOXD4L1Q9NU39 408 aa17.55■□□□□ 0.4
LINC02246-206ENST00000630211 RNF216Q9NWF9 866 aaPredicted RBP17.54■□□□□ 0.4
LINC02246-206ENST00000630211 DMRT2Q9Y5R5 561 aa17.31■□□□□ 0.36
LINC02246-206ENST00000630211 HOXD11P31277 338 aaPredicted RBP17.28■□□□□ 0.36
LINC02246-206ENST00000630211 SLC4A2P04920 1241 aa17.22■□□□□ 0.35
LINC02246-206ENST00000630211 MYCNP04198 464 aaPredicted RBP16.85■□□□□ 0.29
LINC02246-206ENST00000630211 ATXN8OSP0DMR3 200 aa16.79■□□□□ 0.28
LINC02246-206ENST00000630211 RTN4Q9NQC3 1192 aaKnown RBP16.7■□□□□ 0.26
LINC02246-206ENST00000630211 FKBP8Q14318 412 aa16.64■□□□□ 0.25
LINC02246-206ENST00000630211 ATF5Q9Y2D1 282 aaPredicted RBP16.57■□□□□ 0.24
LINC02246-206ENST00000630211 AMER1Q5JTC6 1135 aaPredicted RBP16.52■□□□□ 0.24
LINC02246-206ENST00000630211 DCAF8L1A6NGE4 600 aa16.5■□□□□ 0.23
LINC02246-206ENST00000630211 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.42■□□□□ 0.22
LINC02246-206ENST00000630211 U3KPZ7 1027 aaPredicted RBP16.35■□□□□ 0.21
LINC02246-206ENST00000630211 SLC24A1O60721 1099 aa16.34■□□□□ 0.21
LINC02246-206ENST00000630211 SAMD1Q6SPF0 538 aaPredicted RBP16.23■□□□□ 0.19
LINC02246-206ENST00000630211 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.19■□□□□ 0.18
LINC02246-206ENST00000630211 HNRNPUL2Q1KMD3 747 aaKnown RBP16.19■□□□□ 0.18
LINC02246-206ENST00000630211 ZNF219Q9P2Y4 722 aaPredicted RBP16.05■□□□□ 0.16
LINC02246-206ENST00000630211 MKRN4PQ13434 485 aaPredicted RBP15.85■□□□□ 0.13
LINC02246-206ENST00000630211 SPDYE4A6NLX3 237 aa15.78■□□□□ 0.12
LINC02246-206ENST00000630211 APLP2Q06481 763 aa15.76■□□□□ 0.11
LINC02246-206ENST00000630211 SPINK5Q9NQ38 1064 aaPredicted RBP15.7■□□□□ 0.1
LINC02246-206ENST00000630211 PROM2Q8N271 834 aa15.67■□□□□ 0.1
LINC02246-206ENST00000630211 TRHP20396 242 aaPredicted RBP15.64■□□□□ 0.09
LINC02246-206ENST00000630211 FBXO3Q9UK99 471 aa15.64■□□□□ 0.09
LINC02246-206ENST00000630211 POLA2Q14181 598 aa15.59■□□□□ 0.09
LINC02246-206ENST00000630211 FBLN2P98095 1184 aa15.54■□□□□ 0.08
LINC02246-206ENST00000630211 VASPP50552 380 aaPredicted RBP15.53■□□□□ 0.08
LINC02246-206ENST00000630211 RNF39Q9H2S5 420 aa15.51■□□□□ 0.07
LINC02246-206ENST00000630211 IFNLR1Q8IU57 520 aaPredicted RBP15.48■□□□□ 0.07
LINC02246-206ENST00000630211 CAPN15O75808 1086 aa15.47■□□□□ 0.07
LINC02246-206ENST00000630211 ABCB7O75027 752 aa15.34■□□□□ 0.05
LINC02246-206ENST00000630211 PLCB2Q00722 1185 aa15.32■□□□□ 0.04
LINC02246-206ENST00000630211 PKD2Q13563 968 aa15.29■□□□□ 0.04
LINC02246-206ENST00000630211 C1QBPQ07021 282 aaKnown RBP15.28■□□□□ 0.04
LINC02246-206ENST00000630211 DCAF8L2P0C7V8 631 aa15.18■□□□□ 0.02
LINC02246-206ENST00000630211 ZBTB12Q9Y330 459 aaPredicted RBP15.18■□□□□ 0.02
LINC02246-206ENST00000630211 HAP1P54257 671 aaPredicted RBP15.1■□□□□ 0.01
LINC02246-206ENST00000630211 DSG3P32926 999 aa15.08■□□□□ 0
LINC02246-206ENST00000630211 ZNF692Q9BU19 519 aaPredicted RBP15.07■□□□□ 0
LINC02246-206ENST00000630211 OSCARQ8IYS5 282 aa15.03■□□□□ -0
LINC02246-206ENST00000630211 KLHL34Q8N239 644 aa15.03■□□□□ -0
LINC02246-206ENST00000630211 SPOCK2Q92563 424 aa15.03■□□□□ -0
LINC02246-206ENST00000630211 SSUH2Q9Y2M2 353 aa14.99□□□□□ -0.01
LINC02246-206ENST00000630211 NPM1P06748 294 aaKnown RBP eCLIP14.97□□□□□ -0.01
LINC02246-206ENST00000630211 POTEDQ86YR6 584 aa14.96□□□□□ -0.01
LINC02246-206ENST00000630211 ECM2O94769 699 aaPredicted RBP14.95□□□□□ -0.02
LINC02246-206ENST00000630211 STAG3Q9UJ98 1225 aa14.95□□□□□ -0.02
LINC02246-206ENST00000630211 SPDYE2BA6NHP3 402 aa14.94□□□□□ -0.02
LINC02246-206ENST00000630211 SPDYE6P0CI01 402 aa14.94□□□□□ -0.02
LINC02246-206ENST00000630211 SPDYE2Q495Y8 402 aa14.94□□□□□ -0.02
LINC02246-206ENST00000630211 PABPN1Q86U42 306 aaKnown RBP eCLIP14.93□□□□□ -0.02
LINC02246-206ENST00000630211 PLCD3Q8N3E9 789 aa14.89□□□□□ -0.03
LINC02246-206ENST00000630211 RGL2O15211 777 aa14.87□□□□□ -0.03
LINC02246-206ENST00000630211 MIER1Q8N108 512 aa14.85□□□□□ -0.03
LINC02246-206ENST00000630211 BBXQ8WY36 941 aaPredicted RBP14.85□□□□□ -0.03
LINC02246-206ENST00000630211 VSIG10Q8N0Z9 540 aa14.84□□□□□ -0.03
LINC02246-206ENST00000630211 KDM2AQ9Y2K7 1162 aa14.81□□□□□ -0.04
LINC02246-206ENST00000630211 PAXIP1Q6ZW49 1069 aaPredicted RBP14.78□□□□□ -0.04
LINC02246-206ENST00000630211 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.76□□□□□ -0.05
LINC02246-206ENST00000630211 PRKCSHP14314 528 aaPredicted RBP14.74□□□□□ -0.05
LINC02246-206ENST00000630211 BCANQ96GW7 911 aa14.74□□□□□ -0.05
LINC02246-206ENST00000630211 CFAP44Q96MT7 982 aa14.74□□□□□ -0.05
LINC02246-206ENST00000630211 CIZ1Q9ULV3 898 aaPredicted RBP14.68□□□□□ -0.06
LINC02246-206ENST00000630211 TSHZ2Q9NRE2 1034 aa14.63□□□□□ -0.07
LINC02246-206ENST00000630211 TAOK2Q9UL54 1235 aa14.62□□□□□ -0.07
LINC02246-206ENST00000630211 CHGAP10645 457 aaKnown RBP14.6□□□□□ -0.07
LINC02246-206ENST00000630211 SPRYD3Q8NCJ5 442 aa14.6□□□□□ -0.07
LINC02246-206ENST00000630211 ZBTB47Q9UFB7 747 aaPredicted RBP14.54□□□□□ -0.08
LINC02246-206ENST00000630211 PLEKHG5O94827 1062 aa14.53□□□□□ -0.08
LINC02246-206ENST00000630211 RNF25Q96BH1 459 aaPredicted RBP14.51□□□□□ -0.09
LINC02246-206ENST00000630211 NUBP1P53384 320 aa14.46□□□□□ -0.09
LINC02246-206ENST00000630211 CACNB1Q02641 598 aaPredicted RBP14.45□□□□□ -0.1
LINC02246-206ENST00000630211 TPRNQ4KMQ1 711 aa14.43□□□□□ -0.1
LINC02246-206ENST00000630211 HS6ST3Q8IZP7 471 aa14.43□□□□□ -0.1
LINC02246-206ENST00000630211 TRIM41Q8WV44 630 aa14.43□□□□□ -0.1
LINC02246-206ENST00000630211 GSE1Q14687 1217 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms