RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 STK26Q9P289 416 aa16.19■□□□□ 0.18
TNFAIP3-206ENST00000612899 ATAD2BQ9ULI0 1458 aa16.19■□□□□ 0.18
TNFAIP3-206ENST00000612899 HNRNPMP52272 730 aaKnown RBP eCLIP16.17■□□□□ 0.18
TNFAIP3-206ENST00000612899 ANKRD30AQ9BXX3 1397 aa16.16■□□□□ 0.18
TNFAIP3-206ENST00000612899 ROCK2O75116 1388 aaKnown RBP16.14■□□□□ 0.17
TNFAIP3-206ENST00000612899 GOLGA6L22H0YM25 854 aa16.13■□□□□ 0.17
TNFAIP3-206ENST00000612899 JPH4Q96JJ6 628 aa16.13■□□□□ 0.17
TNFAIP3-206ENST00000612899 KTN1Q86UP2 1357 aaKnown RBP16.13■□□□□ 0.17
TNFAIP3-206ENST00000612899 KIF3BO15066 747 aa16.13■□□□□ 0.17
TNFAIP3-206ENST00000612899 NCLP19338 710 aaKnown RBP16.12■□□□□ 0.17
TNFAIP3-206ENST00000612899 TRHP20396 242 aaPredicted RBP16.11■□□□□ 0.17
TNFAIP3-206ENST00000612899 MS4A1P11836 297 aa16.1■□□□□ 0.17
TNFAIP3-206ENST00000612899 CASC1Q6TDU7 716 aa16.1■□□□□ 0.17
TNFAIP3-206ENST00000612899 PNNQ9H307 717 aaKnown RBP16.1■□□□□ 0.17
TNFAIP3-206ENST00000612899 DEKP35659 375 aaKnown RBP16.09■□□□□ 0.17
TNFAIP3-206ENST00000612899 HDGFP51858 240 aaKnown RBP16.09■□□□□ 0.17
TNFAIP3-206ENST00000612899 TPRNQ4KMQ1 711 aa16.08■□□□□ 0.17
TNFAIP3-206ENST00000612899 NOP58Q9Y2X3 529 aaKnown RBP16.08■□□□□ 0.17
TNFAIP3-206ENST00000612899 U2AF1L5P0DN76 240 aaPredicted RBP16.06■□□□□ 0.16
TNFAIP3-206ENST00000612899 U2AF1Q01081 240 aaKnown RBP eCLIP16.06■□□□□ 0.167e-7■■■■□ 23.3
TNFAIP3-206ENST00000612899 CHMP4BQ9H444 224 aaKnown RBP16.06■□□□□ 0.16
TNFAIP3-206ENST00000612899 SMARCA4P51532 1647 aa16.06■□□□□ 0.16
TNFAIP3-206ENST00000612899 RALBP1Q15311 655 aa16.06■□□□□ 0.16
TNFAIP3-206ENST00000612899 TRIM44Q96DX7 344 aaPredicted RBP16.06■□□□□ 0.16
TNFAIP3-206ENST00000612899 DHX57Q6P158 1386 aaKnown RBP16.06■□□□□ 0.16
TNFAIP3-206ENST00000612899 RCAN3Q9UKA8 241 aa16.05■□□□□ 0.16
TNFAIP3-206ENST00000612899 RBM19Q9Y4C8 960 aaKnown RBP16.04■□□□□ 0.16
TNFAIP3-206ENST00000612899 HDGFL2Q7Z4V5 671 aaPredicted RBP16.03■□□□□ 0.16
TNFAIP3-206ENST00000612899 SPAG9O60271 1321 aaKnown RBP16.03■□□□□ 0.16
TNFAIP3-206ENST00000612899 OS9Q13438 667 aaPredicted RBP16.03■□□□□ 0.16
TNFAIP3-206ENST00000612899 CCDC18Q5T9S5 1454 aa16.02■□□□□ 0.16
TNFAIP3-206ENST00000612899 NUTM2DQ5VT03 806 aaPredicted RBP16.02■□□□□ 0.16
TNFAIP3-206ENST00000612899 RSPH4AQ5TD94 716 aa16.02■□□□□ 0.15
TNFAIP3-206ENST00000612899 FANCD2Q9BXW9 1451 aa16■□□□□ 0.15
TNFAIP3-206ENST00000612899 ST20-MTHFSA0A0A6YYL1 179 aa16■□□□□ 0.15
TNFAIP3-206ENST00000612899 RTN4Q9NQC3 1192 aaKnown RBP15.99■□□□□ 0.15
TNFAIP3-206ENST00000612899 NLRP13Q86W25 1043 aa15.98■□□□□ 0.15
TNFAIP3-206ENST00000612899 HSP90AB1P08238 724 aaKnown RBP15.98■□□□□ 0.15
TNFAIP3-206ENST00000612899 RTF1Q92541 710 aaKnown RBP15.97■□□□□ 0.15
TNFAIP3-206ENST00000612899 WASHC2CQ9Y4E1 1318 aa15.97■□□□□ 0.15
TNFAIP3-206ENST00000612899 APBB1O00213 710 aa15.96■□□□□ 0.15
TNFAIP3-206ENST00000612899 IGF1RP08069 1367 aa15.96■□□□□ 0.14
TNFAIP3-206ENST00000612899 TAOK2Q9UL54 1235 aa15.96■□□□□ 0.14
TNFAIP3-206ENST00000612899 KCNJ4P48050 445 aa15.95■□□□□ 0.14
TNFAIP3-206ENST00000612899 PAK3O75914 559 aaPredicted RBP15.95■□□□□ 0.14
TNFAIP3-206ENST00000612899 CCDC146Q8IYE0 955 aa15.94■□□□□ 0.14
TNFAIP3-206ENST00000612899 PTMAP06454 111 aaKnown RBP15.94■□□□□ 0.14
TNFAIP3-206ENST00000612899 TRAK1Q9UPV9 953 aa15.94■□□□□ 0.14
TNFAIP3-206ENST00000612899 SPRYD3Q8NCJ5 442 aa15.94■□□□□ 0.14
TNFAIP3-206ENST00000612899 IPO8O15397 1037 aaKnown RBP15.93■□□□□ 0.14
TNFAIP3-206ENST00000612899 FGD1P98174 961 aa15.93■□□□□ 0.14
TNFAIP3-206ENST00000612899 ZRSR1Q15695 479 aaKnown RBP15.92■□□□□ 0.14
TNFAIP3-206ENST00000612899 GOLGA2Q08379 1002 aa15.92■□□□□ 0.14
TNFAIP3-206ENST00000612899 CLUAP1Q96AJ1 413 aa15.91■□□□□ 0.14
TNFAIP3-206ENST00000612899 EIF3AQ14152 1382 aaKnown RBP15.91■□□□□ 0.14
TNFAIP3-206ENST00000612899 ITPRIPQ8IWB1 547 aa15.91■□□□□ 0.14
TNFAIP3-206ENST00000612899 HSCBQ8IWL3 235 aa15.9■□□□□ 0.14
TNFAIP3-206ENST00000612899 TERF2IPQ9NYB0 399 aa15.9■□□□□ 0.14
TNFAIP3-206ENST00000612899 PTPRGP23470 1445 aa15.89■□□□□ 0.13
TNFAIP3-206ENST00000612899 PLCB2Q00722 1185 aa15.89■□□□□ 0.13
TNFAIP3-206ENST00000612899 PANK3Q9H999 370 aa15.89■□□□□ 0.13
TNFAIP3-206ENST00000612899 PRKRIP1Q9H875 184 aaPredicted RBP15.89■□□□□ 0.13
TNFAIP3-206ENST00000612899 CCDC144AA2RUR9 1427 aa15.89■□□□□ 0.13
TNFAIP3-206ENST00000612899 PODXL2Q9NZ53 605 aa15.89■□□□□ 0.13
TNFAIP3-206ENST00000612899 NUTM2FA1L443 756 aa15.89■□□□□ 0.13
TNFAIP3-206ENST00000612899 PKNOX2Q96KN3 472 aa15.89■□□□□ 0.13
TNFAIP3-206ENST00000612899 NPHP1O15259 732 aa15.88■□□□□ 0.13
TNFAIP3-206ENST00000612899 FGD5Q6ZNL6 1462 aa15.88■□□□□ 0.13
TNFAIP3-206ENST00000612899 NAP1L2Q9ULW6 460 aaPredicted RBP15.87■□□□□ 0.13
TNFAIP3-206ENST00000612899 RAD54L2Q9Y4B4 1467 aa15.87■□□□□ 0.13
TNFAIP3-206ENST00000612899 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.87■□□□□ 0.13
TNFAIP3-206ENST00000612899 RWDD1Q9H446 243 aaPredicted RBP15.87■□□□□ 0.13
TNFAIP3-206ENST00000612899 TSHZ2Q9NRE2 1034 aa15.87■□□□□ 0.13
TNFAIP3-206ENST00000612899 SMC4Q9NTJ3 1288 aa15.86■□□□□ 0.13
TNFAIP3-206ENST00000612899 CALD1Q05682 793 aaKnown RBP15.86■□□□□ 0.13
TNFAIP3-206ENST00000612899 ZNF644Q9H582 1327 aaPredicted RBP15.86■□□□□ 0.13
TNFAIP3-206ENST00000612899 TCERG1O14776 1098 aaKnown RBP15.86■□□□□ 0.13
TNFAIP3-206ENST00000612899 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.85■□□□□ 0.13
TNFAIP3-206ENST00000612899 PDE3BQ13370 1112 aa15.85■□□□□ 0.13
TNFAIP3-206ENST00000612899 DNTTIP2Q5QJE6 756 aaKnown RBP15.85■□□□□ 0.13
TNFAIP3-206ENST00000612899 RRP7AQ9Y3A4 280 aaKnown RBP15.84■□□□□ 0.13
TNFAIP3-206ENST00000612899 KIF15Q9NS87 1388 aa15.84■□□□□ 0.13
TNFAIP3-206ENST00000612899 MYBBP1AQ9BQG0 1328 aaKnown RBP15.83■□□□□ 0.13
TNFAIP3-206ENST00000612899 GAPVD1Q14C86 1478 aa15.83■□□□□ 0.13
TNFAIP3-206ENST00000612899 CDK11BP21127 795 aaKnown RBP15.83■□□□□ 0.12
TNFAIP3-206ENST00000612899 USP47Q96K76 1375 aa15.82■□□□□ 0.12
TNFAIP3-206ENST00000612899 SLKQ9H2G2 1235 aaPredicted RBP15.82■□□□□ 0.12
TNFAIP3-206ENST00000612899 CSB-PGBD3P0DP91 1061 aa15.81■□□□□ 0.12
TNFAIP3-206ENST00000612899 NGDNQ8NEJ9 315 aaKnown RBP15.81■□□□□ 0.12
TNFAIP3-206ENST00000612899 NAP1L5Q96NT1 182 aaPredicted RBP15.81■□□□□ 0.12
TNFAIP3-206ENST00000612899 CENPJQ9HC77 1338 aaPredicted RBP15.81■□□□□ 0.12
TNFAIP3-206ENST00000612899 PHLDB1Q86UU1 1377 aa15.8■□□□□ 0.12
TNFAIP3-206ENST00000612899 MCCP23508 829 aa15.8■□□□□ 0.12
TNFAIP3-206ENST00000612899 ZNF330Q9Y3S2 320 aaPredicted RBP15.79■□□□□ 0.12
TNFAIP3-206ENST00000612899 EID1Q9Y6B2 187 aa15.79■□□□□ 0.12
TNFAIP3-206ENST00000612899 STK31Q9BXU1 1019 aa15.79■□□□□ 0.12
TNFAIP3-206ENST00000612899 CYB5RLQ6IPT4 315 aa15.78■□□□□ 0.12
TNFAIP3-206ENST00000612899 GOLGA6L4A6NEF3 574 aa15.78■□□□□ 0.12
TNFAIP3-206ENST00000612899 PLIN1O60240 522 aa15.78■□□□□ 0.12
TNFAIP3-206ENST00000612899 PMFBP1Q8TBY8 1022 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms