RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 HMCN2Q8NDA2 5059 aa4.09□□□□□ -1.76
TNFAIP3-206ENST00000612899 LCE3DQ9BYE3 92 aa4.05□□□□□ -1.76
TNFAIP3-206ENST00000612899 KRTAP19-6Q3LI70 58 aa3.97□□□□□ -1.77
TNFAIP3-206ENST00000612899 LCE3EQ5T5B0 92 aa3.97□□□□□ -1.77
TNFAIP3-206ENST00000612899 OBSCNQ5VST9 7968 aa3.96□□□□□ -1.77
TNFAIP3-206ENST00000612899 MT1MQ8N339 61 aa3.96□□□□□ -1.78
TNFAIP3-206ENST00000612899 LCE2AQ5TA79 106 aaPredicted RBP3.95□□□□□ -1.78
TNFAIP3-206ENST00000612899 KRTAP4-3Q9BYR4 195 aa3.93□□□□□ -1.78
TNFAIP3-206ENST00000612899 LOC100996750A0A140TA64 210 aa3.92□□□□□ -1.78
TNFAIP3-206ENST00000612899 KRTAP19-7Q3SYF9 63 aa3.89□□□□□ -1.79
TNFAIP3-206ENST00000612899 KRTAP9-2Q9BYQ4 174 aa3.89□□□□□ -1.79
TNFAIP3-206ENST00000612899 LCE2DQ5TA82 110 aaPredicted RBP3.84□□□□□ -1.79
TNFAIP3-206ENST00000612899 KRTAP2-3P0C7H8 128 aa3.78□□□□□ -1.81
TNFAIP3-206ENST00000612899 KRTAP2-4Q9BYR9 128 aa3.78□□□□□ -1.81
TNFAIP3-206ENST00000612899 KRTAP2-1Q9BYU5 128 aa3.78□□□□□ -1.81
TNFAIP3-206ENST00000612899 MT3P25713 68 aa3.77□□□□□ -1.81
TNFAIP3-206ENST00000612899 PRM1P04553 51 aa3.77□□□□□ -1.81
TNFAIP3-206ENST00000612899 MT4P47944 62 aa3.77□□□□□ -1.81
TNFAIP3-206ENST00000612899 FCGBPQ9Y6R7 5405 aaPredicted RBP3.76□□□□□ -1.81
TNFAIP3-206ENST00000612899 SYNE2Q8WXH0 6885 aaKnown RBP3.74□□□□□ -1.81
TNFAIP3-206ENST00000612899 DSTQ03001 7570 aaKnown RBP3.7□□□□□ -1.82
TNFAIP3-206ENST00000612899 USH2AO75445 5202 aa3.69□□□□□ -1.82
TNFAIP3-206ENST00000612899 KRTAP4-9Q9BYQ8 210 aa3.65□□□□□ -1.83
TNFAIP3-206ENST00000612899 MT1AP04731 61 aa3.64□□□□□ -1.83
TNFAIP3-206ENST00000612899 KRTAP9-6A8MVA2 160 aa3.61□□□□□ -1.83
TNFAIP3-206ENST00000612899 LCE1DQ5T752 114 aa3.59□□□□□ -1.83
TNFAIP3-206ENST00000612899 KRTAP9-6A0A140TA67 174 aa3.59□□□□□ -1.83
TNFAIP3-206ENST00000612899 LCE1BQ5T7P3 118 aa3.59□□□□□ -1.83
TNFAIP3-206ENST00000612899 MACF1Q9UPN3 7388 aaKnown RBP3.5□□□□□ -1.85
TNFAIP3-206ENST00000612899 KMT2DO14686 5537 aa3.5□□□□□ -1.85
TNFAIP3-206ENST00000612899 LCE5AQ5TCM9 118 aa3.49□□□□□ -1.85
TNFAIP3-206ENST00000612899 KRTAP6-1Q3LI64 71 aa3.49□□□□□ -1.85
TNFAIP3-206ENST00000612899 LCE1AQ5T7P2 110 aa3.48□□□□□ -1.85
TNFAIP3-206ENST00000612899 KRTAP9-7A8MTY7 169 aa3.44□□□□□ -1.86
TNFAIP3-206ENST00000612899 KRTAP6-3Q3LI67 103 aa3.42□□□□□ -1.86
TNFAIP3-206ENST00000612899 KRTAP6-2Q3LI66 62 aa3.4□□□□□ -1.86
TNFAIP3-206ENST00000612899 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.37□□□□□ -1.87
TNFAIP3-206ENST00000612899 SSPOA2VEC9 5147 aa3.37□□□□□ -1.87
TNFAIP3-206ENST00000612899 MUC12Q9UKN1 5478 aa3.34□□□□□ -1.87
TNFAIP3-206ENST00000612899 KRTAP20-1Q3LI63 56 aa3.34□□□□□ -1.87
TNFAIP3-206ENST00000612899 KRTAP9-4Q9BYQ2 154 aa3.34□□□□□ -1.88
TNFAIP3-206ENST00000612899 MDN1Q9NU22 5596 aa3.23□□□□□ -1.89
TNFAIP3-206ENST00000612899 LCE4AQ5TA78 99 aa3.22□□□□□ -1.89
TNFAIP3-206ENST00000612899 KRTAP2-2Q9BYT5 123 aa3.21□□□□□ -1.9
TNFAIP3-206ENST00000612899 MUC19Q7Z5P9 8384 aa3.16□□□□□ -1.9
TNFAIP3-206ENST00000612899 NEBP20929 6669 aa3.05□□□□□ -1.92
TNFAIP3-206ENST00000612899 KRTAP5-9P26371 169 aa3.03□□□□□ -1.92
TNFAIP3-206ENST00000612899 LCE1EQ5T753 118 aa3.02□□□□□ -1.93
TNFAIP3-206ENST00000612899 LCE1CQ5T751 118 aa2.96□□□□□ -1.94
TNFAIP3-206ENST00000612899 LCE1FQ5T754 118 aa2.96□□□□□ -1.94
TNFAIP3-206ENST00000612899 KRTAP4-6Q9BYQ5 205 aa2.94□□□□□ -1.94
TNFAIP3-206ENST00000612899 GPR98Q8WXG9 6306 aa2.85□□□□□ -1.95
TNFAIP3-206ENST00000612899 KRTAP20-2Q3LI61 65 aa2.83□□□□□ -1.96
TNFAIP3-206ENST00000612899 KRTAP9-9Q9BYP9 154 aa2.76□□□□□ -1.97
TNFAIP3-206ENST00000612899 KRTAP4-11Q9BYQ6 195 aa2.74□□□□□ -1.97
TNFAIP3-206ENST00000612899 KRTAP5-5Q701N2 237 aaPredicted RBP2.74□□□□□ -1.97
TNFAIP3-206ENST00000612899 MUC5ACP98088 5654 aa2.66□□□□□ -1.98
TNFAIP3-206ENST00000612899 HMCN1Q96RW7 5635 aa2.58□□□□□ -2
TNFAIP3-206ENST00000612899 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
TNFAIP3-206ENST00000612899 KRTAP5-4Q6L8H1 288 aa2.56□□□□□ -2
TNFAIP3-206ENST00000612899 KRTAP4-12Q9BQ66 201 aa2.54□□□□□ -2
TNFAIP3-206ENST00000612899 KRTAP4-2Q9BYR5 136 aa2.54□□□□□ -2
TNFAIP3-206ENST00000612899 AHNAK2Q8IVF2 5795 aa2.41□□□□□ -2.02
TNFAIP3-206ENST00000612899 KRTAP5-3Q6L8H2 238 aa2.32□□□□□ -2.04
TNFAIP3-206ENST00000612899 KRTAP5-8O75690 187 aa2.15□□□□□ -2.07
TNFAIP3-206ENST00000612899 KRTAP5-2Q701N4 177 aa2.12□□□□□ -2.07
TNFAIP3-206ENST00000612899 KRTAP5-10Q6L8G5 202 aa2.11□□□□□ -2.07
TNFAIP3-206ENST00000612899 AHNAKQ09666 5890 aaKnown RBP2.02□□□□□ -2.09
TNFAIP3-206ENST00000612899 MUC5BQ9HC84 5762 aaPredicted RBP1.98□□□□□ -2.09
TNFAIP3-206ENST00000612899 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
TNFAIP3-206ENST00000612899 KRTAP5-1Q6L8H4 278 aa1.89□□□□□ -2.11
TNFAIP3-206ENST00000612899 KRTAP5-11Q6L8G4 156 aa1.87□□□□□ -2.11
TNFAIP3-206ENST00000612899 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
TNFAIP3-206ENST00000612899 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
TNFAIP3-206ENST00000612899 KRTAP5-7Q6L8G8 165 aa1.74□□□□□ -2.13
TNFAIP3-206ENST00000612899 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.69□□□□□ -2.14
TNFAIP3-206ENST00000612899 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 13.8 ms