RNA–Protein interactions for RNA: ENST00000601762.5

FARP1-236, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-236ENST00000601762 AEBP2Q6ZN18 517 aaPredicted RBP11.63□□□□□ -0.55
FARP1-236ENST00000601762 CHIC1Q5VXU3 224 aa11.51□□□□□ -0.57
FARP1-236ENST00000601762 PHF23Q9BUL5 403 aaPredicted RBP10.16□□□□□ -0.78
FARP1-236ENST00000601762 SENP3Q9H4L4 574 aaPredicted RBP9.83□□□□□ -0.84
FARP1-236ENST00000601762 PLPPR3Q6T4P5 718 aa9.43□□□□□ -0.9
FARP1-236ENST00000601762 POTEDQ86YR6 584 aa9.2□□□□□ -0.94
FARP1-236ENST00000601762 FOXD1Q16676 465 aa9.12□□□□□ -0.95
FARP1-236ENST00000601762 ADRA2BP18089 450 aa8.92□□□□□ -0.98
FARP1-236ENST00000601762 PPP6R1Q9UPN7 881 aa8.92□□□□□ -0.98
FARP1-236ENST00000601762 PIAS4Q8N2W9 510 aaPredicted RBP8.63□□□□□ -1.03
FARP1-236ENST00000601762 KCNA4P22459 653 aa8.56□□□□□ -1.04
FARP1-236ENST00000601762 EHMT2Q96KQ7 1210 aa8.52□□□□□ -1.05
FARP1-236ENST00000601762 MSH5O43196 834 aa8.44□□□□□ -1.06
FARP1-236ENST00000601762 PPP4R3CPQ6ZMV5 832 aa8.34□□□□□ -1.07
FARP1-236ENST00000601762 SLC4A1APQ9BWU0 796 aaKnown RBP8.28□□□□□ -1.08
FARP1-236ENST00000601762 NCBP3Q53F19 620 aaKnown RBP8.25□□□□□ -1.09
FARP1-236ENST00000601762 CSRNP3Q8WYN3 585 aa8.22□□□□□ -1.09
FARP1-236ENST00000601762 SCAF1Q9H7N4 1312 aaKnown RBP8.15□□□□□ -1.1
FARP1-236ENST00000601762 MAPK8IP2Q13387 824 aaPredicted RBP8.06□□□□□ -1.12
FARP1-236ENST00000601762 CNKSR2Q8WXI2 1034 aa8.06□□□□□ -1.12
FARP1-236ENST00000601762 NPM3O75607 178 aaKnown RBP8.05□□□□□ -1.12
FARP1-236ENST00000601762 DMRT2Q9Y5R5 561 aa7.87□□□□□ -1.15
FARP1-236ENST00000601762 RNF216Q9NWF9 866 aaPredicted RBP7.86□□□□□ -1.15
FARP1-236ENST00000601762 ZBTB22O15209 634 aa7.85□□□□□ -1.15
FARP1-236ENST00000601762 DNAJC5BQ9UF47 199 aa7.83□□□□□ -1.16
FARP1-236ENST00000601762 FOXD4L1Q9NU39 408 aa7.79□□□□□ -1.16
FARP1-236ENST00000601762 HOXD11P31277 338 aaPredicted RBP7.77□□□□□ -1.17
FARP1-236ENST00000601762 AMER1Q5JTC6 1135 aaPredicted RBP7.65□□□□□ -1.18
FARP1-236ENST00000601762 CACNB1Q02641 598 aaPredicted RBP7.64□□□□□ -1.19
FARP1-236ENST00000601762 SLC24A1O60721 1099 aa7.63□□□□□ -1.19
FARP1-236ENST00000601762 DCAF8L1A6NGE4 600 aa7.56□□□□□ -1.2
FARP1-236ENST00000601762 SLC4A2P04920 1241 aa7.55□□□□□ -1.2
FARP1-236ENST00000601762 RTN4Q9NQC3 1192 aaKnown RBP7.55□□□□□ -1.2
FARP1-236ENST00000601762 ATXN8OSP0DMR3 200 aa7.54□□□□□ -1.2
FARP1-236ENST00000601762 MYCNP04198 464 aaPredicted RBP7.47□□□□□ -1.21
FARP1-236ENST00000601762 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.43□□□□□ -1.22
FARP1-236ENST00000601762 FKBP8Q14318 412 aa7.41□□□□□ -1.22
FARP1-236ENST00000601762 U3KPZ7 1027 aaPredicted RBP7.31□□□□□ -1.24
FARP1-236ENST00000601762 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.27□□□□□ -1.25
FARP1-236ENST00000601762 HNRNPUL2Q1KMD3 747 aaKnown RBP7.27□□□□□ -1.25
FARP1-236ENST00000601762 SAMD1Q6SPF0 538 aaPredicted RBP7.25□□□□□ -1.25
FARP1-236ENST00000601762 ATF5Q9Y2D1 282 aaPredicted RBP7.23□□□□□ -1.25
FARP1-236ENST00000601762 APLP2Q06481 763 aa7.15□□□□□ -1.26
FARP1-236ENST00000601762 RNF39Q9H2S5 420 aa7.15□□□□□ -1.26
FARP1-236ENST00000601762 FBXO3Q9UK99 471 aa7.12□□□□□ -1.27
FARP1-236ENST00000601762 POTEHQ6S545 545 aa7.11□□□□□ -1.27
FARP1-236ENST00000601762 ZNF219Q9P2Y4 722 aaPredicted RBP7.09□□□□□ -1.27
FARP1-236ENST00000601762 C1QBPQ07021 282 aaKnown RBP7.08□□□□□ -1.28
FARP1-236ENST00000601762 SPINK5Q9NQ38 1064 aaPredicted RBP7.08□□□□□ -1.28
FARP1-236ENST00000601762 TRHP20396 242 aaPredicted RBP7.06□□□□□ -1.28
FARP1-236ENST00000601762 CAPN15O75808 1086 aa7.04□□□□□ -1.28
FARP1-236ENST00000601762 PLCB2Q00722 1185 aa7□□□□□ -1.29
FARP1-236ENST00000601762 SPDYE4A6NLX3 237 aa6.99□□□□□ -1.29
FARP1-236ENST00000601762 POLA2Q14181 598 aa6.98□□□□□ -1.29
FARP1-236ENST00000601762 PROM2Q8N271 834 aa6.95□□□□□ -1.3
FARP1-236ENST00000601762 VASPP50552 380 aaPredicted RBP6.94□□□□□ -1.3
FARP1-236ENST00000601762 ABCB7O75027 752 aa6.92□□□□□ -1.3
FARP1-236ENST00000601762 FBLN2P98095 1184 aa6.92□□□□□ -1.3
FARP1-236ENST00000601762 MKRN4PQ13434 485 aaPredicted RBP6.91□□□□□ -1.3
FARP1-236ENST00000601762 DSG3P32926 999 aa6.88□□□□□ -1.31
FARP1-236ENST00000601762 HAP1P54257 671 aaPredicted RBP6.88□□□□□ -1.31
FARP1-236ENST00000601762 DCAF8L2P0C7V8 631 aa6.87□□□□□ -1.31
FARP1-236ENST00000601762 BCANQ96GW7 911 aa6.87□□□□□ -1.31
FARP1-236ENST00000601762 IFNLR1Q8IU57 520 aaPredicted RBP6.85□□□□□ -1.31
FARP1-236ENST00000601762 VSIG10Q8N0Z9 540 aa6.84□□□□□ -1.31
FARP1-236ENST00000601762 ZBTB12Q9Y330 459 aaPredicted RBP6.84□□□□□ -1.31
FARP1-236ENST00000601762 PKD2Q13563 968 aa6.8□□□□□ -1.32
FARP1-236ENST00000601762 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.79□□□□□ -1.32
FARP1-236ENST00000601762 BBXQ8WY36 941 aaPredicted RBP6.76□□□□□ -1.33
FARP1-236ENST00000601762 SPOCK2Q92563 424 aa6.74□□□□□ -1.33
FARP1-236ENST00000601762 TAOK2Q9UL54 1235 aa6.74□□□□□ -1.33
FARP1-236ENST00000601762 KLHL34Q8N239 644 aa6.73□□□□□ -1.33
FARP1-236ENST00000601762 ECM2O94769 699 aaPredicted RBP6.71□□□□□ -1.34
FARP1-236ENST00000601762 OSCARQ8IYS5 282 aa6.71□□□□□ -1.34
FARP1-236ENST00000601762 ZNF692Q9BU19 519 aaPredicted RBP6.71□□□□□ -1.34
FARP1-236ENST00000601762 STAG3Q9UJ98 1225 aa6.71□□□□□ -1.34
FARP1-236ENST00000601762 SPDYE2BA6NHP3 402 aa6.68□□□□□ -1.34
FARP1-236ENST00000601762 SPDYE6P0CI01 402 aa6.68□□□□□ -1.34
FARP1-236ENST00000601762 SPDYE2Q495Y8 402 aa6.68□□□□□ -1.34
FARP1-236ENST00000601762 PAXIP1Q6ZW49 1069 aaPredicted RBP6.67□□□□□ -1.34
FARP1-236ENST00000601762 PRKCSHP14314 528 aaPredicted RBP6.66□□□□□ -1.34
FARP1-236ENST00000601762 PLCD3Q8N3E9 789 aa6.64□□□□□ -1.35
FARP1-236ENST00000601762 SPRYD3Q8NCJ5 442 aa6.64□□□□□ -1.35
FARP1-236ENST00000601762 CFAP44Q96MT7 982 aa6.64□□□□□ -1.35
FARP1-236ENST00000601762 KDM2AQ9Y2K7 1162 aa6.64□□□□□ -1.35
FARP1-236ENST00000601762 SSUH2Q9Y2M2 353 aa6.63□□□□□ -1.35
FARP1-236ENST00000601762 NPM1P06748 294 aaKnown RBP eCLIP6.62□□□□□ -1.35
FARP1-236ENST00000601762 PABPN1Q86U42 306 aaKnown RBP eCLIP6.62□□□□□ -1.35
FARP1-236ENST00000601762 TPRNQ4KMQ1 711 aa6.61□□□□□ -1.35
FARP1-236ENST00000601762 PLEKHG5O94827 1062 aa6.6□□□□□ -1.35
FARP1-236ENST00000601762 ZBTB47Q9UFB7 747 aaPredicted RBP6.6□□□□□ -1.35
FARP1-236ENST00000601762 RGL2O15211 777 aa6.59□□□□□ -1.35
FARP1-236ENST00000601762 MIER1Q8N108 512 aa6.59□□□□□ -1.35
FARP1-236ENST00000601762 TRIM41Q8WV44 630 aa6.58□□□□□ -1.36
FARP1-236ENST00000601762 CHGAP10645 457 aaKnown RBP6.54□□□□□ -1.36
FARP1-236ENST00000601762 TSHZ2Q9NRE2 1034 aa6.54□□□□□ -1.36
FARP1-236ENST00000601762 RBM42Q9BTD8 480 aaKnown RBP6.53□□□□□ -1.36
FARP1-236ENST00000601762 CIZ1Q9ULV3 898 aaPredicted RBP6.53□□□□□ -1.36
FARP1-236ENST00000601762 NBR1Q14596 966 aa6.52□□□□□ -1.37
FARP1-236ENST00000601762 DNAJC5Q9H3Z4 198 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms