RNA–Protein interactions for RNA: ENST00000589550.1

PIK3C3-211, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 3

Gene PIK3C3, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-211ENST00000589550 AEBP2Q6ZN18 517 aaPredicted RBP21■□□□□ 0.95
PIK3C3-211ENST00000589550 CHIC1Q5VXU3 224 aa19.77■□□□□ 0.76
PIK3C3-211ENST00000589550 SENP3Q9H4L4 574 aaPredicted RBP18.11■□□□□ 0.49
PIK3C3-211ENST00000589550 PHF23Q9BUL5 403 aaPredicted RBP17.74■□□□□ 0.43
PIK3C3-211ENST00000589550 FOXD1Q16676 465 aa16.81■□□□□ 0.28
PIK3C3-211ENST00000589550 PLPPR3Q6T4P5 718 aa16.11■□□□□ 0.17
PIK3C3-211ENST00000589550 POTEDQ86YR6 584 aa15.99■□□□□ 0.15
PIK3C3-211ENST00000589550 MSH5O43196 834 aa15.97■□□□□ 0.15
PIK3C3-211ENST00000589550 PIAS4Q8N2W9 510 aaPredicted RBP15.66■□□□□ 0.1
PIK3C3-211ENST00000589550 PPP6R1Q9UPN7 881 aa15.42■□□□□ 0.06
PIK3C3-211ENST00000589550 ADRA2BP18089 450 aa15.36■□□□□ 0.05
PIK3C3-211ENST00000589550 KCNA4P22459 653 aa14.76□□□□□ -0.05
PIK3C3-211ENST00000589550 EHMT2Q96KQ7 1210 aa14.66□□□□□ -0.06
PIK3C3-211ENST00000589550 DMRT2Q9Y5R5 561 aa14.29□□□□□ -0.12
PIK3C3-211ENST00000589550 PPP4R3CPQ6ZMV5 832 aa14.25□□□□□ -0.13
PIK3C3-211ENST00000589550 SCAF1Q9H7N4 1312 aaKnown RBP14.23□□□□□ -0.13
PIK3C3-211ENST00000589550 SLC4A1APQ9BWU0 796 aaKnown RBP14.23□□□□□ -0.13
PIK3C3-211ENST00000589550 NCBP3Q53F19 620 aaKnown RBP14.17□□□□□ -0.14
PIK3C3-211ENST00000589550 MAPK8IP2Q13387 824 aaPredicted RBP14.16□□□□□ -0.14
PIK3C3-211ENST00000589550 CSRNP3Q8WYN3 585 aa14.16□□□□□ -0.14
PIK3C3-211ENST00000589550 NPM3O75607 178 aaKnown RBP13.89□□□□□ -0.19
PIK3C3-211ENST00000589550 CACNB1Q02641 598 aaPredicted RBP13.8□□□□□ -0.2
PIK3C3-211ENST00000589550 CNKSR2Q8WXI2 1034 aa13.72□□□□□ -0.21
PIK3C3-211ENST00000589550 HOXD11P31277 338 aaPredicted RBP13.66□□□□□ -0.22
PIK3C3-211ENST00000589550 DCAF8L1A6NGE4 600 aa13.61□□□□□ -0.23
PIK3C3-211ENST00000589550 ZBTB22O15209 634 aa13.58□□□□□ -0.24
PIK3C3-211ENST00000589550 RNF39Q9H2S5 420 aa13.54□□□□□ -0.24
PIK3C3-211ENST00000589550 RNF216Q9NWF9 866 aaPredicted RBP13.48□□□□□ -0.25
PIK3C3-211ENST00000589550 DNAJC5BQ9UF47 199 aa13.48□□□□□ -0.25
PIK3C3-211ENST00000589550 FOXD4L1Q9NU39 408 aa13.43□□□□□ -0.26
PIK3C3-211ENST00000589550 C1QBPQ07021 282 aaKnown RBP13.38□□□□□ -0.27
PIK3C3-211ENST00000589550 AMER1Q5JTC6 1135 aaPredicted RBP13.05□□□□□ -0.32
PIK3C3-211ENST00000589550 SLC24A1O60721 1099 aa13.02□□□□□ -0.33
PIK3C3-211ENST00000589550 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.96□□□□□ -0.336e-7■■□□□ 14.2
PIK3C3-211ENST00000589550 RTN4Q9NQC3 1192 aaKnown RBP12.96□□□□□ -0.33
PIK3C3-211ENST00000589550 ATXN8OSP0DMR3 200 aa12.93□□□□□ -0.34
PIK3C3-211ENST00000589550 SLC4A2P04920 1241 aa12.91□□□□□ -0.34
PIK3C3-211ENST00000589550 MYCNP04198 464 aaPredicted RBP12.87□□□□□ -0.35
PIK3C3-211ENST00000589550 FKBP8Q14318 412 aa12.76□□□□□ -0.37
PIK3C3-211ENST00000589550 U3KPZ7 1027 aaPredicted RBP12.65□□□□□ -0.38
PIK3C3-211ENST00000589550 DSG3P32926 999 aa12.55□□□□□ -0.4
PIK3C3-211ENST00000589550 CAPN15O75808 1086 aa12.53□□□□□ -0.4
PIK3C3-211ENST00000589550 SPINK5Q9NQ38 1064 aaPredicted RBP12.5□□□□□ -0.41
PIK3C3-211ENST00000589550 POTEHQ6S545 545 aa12.49□□□□□ -0.41
PIK3C3-211ENST00000589550 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.45□□□□□ -0.42
PIK3C3-211ENST00000589550 HNRNPUL2Q1KMD3 747 aaKnown RBP12.45□□□□□ -0.42
PIK3C3-211ENST00000589550 APLP2Q06481 763 aa12.43□□□□□ -0.42
PIK3C3-211ENST00000589550 SAMD1Q6SPF0 538 aaPredicted RBP12.41□□□□□ -0.42
PIK3C3-211ENST00000589550 ATF5Q9Y2D1 282 aaPredicted RBP12.37□□□□□ -0.43
PIK3C3-211ENST00000589550 ZNF219Q9P2Y4 722 aaPredicted RBP12.33□□□□□ -0.44
PIK3C3-211ENST00000589550 TRHP20396 242 aaPredicted RBP12.24□□□□□ -0.45
PIK3C3-211ENST00000589550 FBXO3Q9UK99 471 aa12.18□□□□□ -0.46
PIK3C3-211ENST00000589550 ABCB7O75027 752 aa12.16□□□□□ -0.46
PIK3C3-211ENST00000589550 RBM42Q9BTD8 480 aaKnown RBP12.1□□□□□ -0.47
PIK3C3-211ENST00000589550 SPDYE4A6NLX3 237 aa12.04□□□□□ -0.48
PIK3C3-211ENST00000589550 PLCB2Q00722 1185 aa11.99□□□□□ -0.49
PIK3C3-211ENST00000589550 PROM2Q8N271 834 aa11.98□□□□□ -0.49
PIK3C3-211ENST00000589550 VASPP50552 380 aaPredicted RBP11.94□□□□□ -0.5
PIK3C3-211ENST00000589550 FBLN2P98095 1184 aa11.9□□□□□ -0.5
PIK3C3-211ENST00000589550 MKRN4PQ13434 485 aaPredicted RBP11.9□□□□□ -0.5
PIK3C3-211ENST00000589550 POLA2Q14181 598 aa11.86□□□□□ -0.51
PIK3C3-211ENST00000589550 CHRDL2Q6WN34 429 aa11.86□□□□□ -0.51
PIK3C3-211ENST00000589550 IFNLR1Q8IU57 520 aaPredicted RBP11.8□□□□□ -0.52
PIK3C3-211ENST00000589550 HAP1P54257 671 aaPredicted RBP11.79□□□□□ -0.52
PIK3C3-211ENST00000589550 DCAF8L2P0C7V8 631 aa11.77□□□□□ -0.53
PIK3C3-211ENST00000589550 ZBTB12Q9Y330 459 aaPredicted RBP11.74□□□□□ -0.53
PIK3C3-211ENST00000589550 PKD2Q13563 968 aa11.71□□□□□ -0.53
PIK3C3-211ENST00000589550 AKT1S1Q96B36 256 aa11.71□□□□□ -0.53
PIK3C3-211ENST00000589550 BCANQ96GW7 911 aa11.71□□□□□ -0.53
PIK3C3-211ENST00000589550 VSIG10Q8N0Z9 540 aa11.69□□□□□ -0.54
PIK3C3-211ENST00000589550 SP7Q8TDD2 431 aaPredicted RBP11.59□□□□□ -0.55
PIK3C3-211ENST00000589550 SPOCK2Q92563 424 aa11.59□□□□□ -0.55
PIK3C3-211ENST00000589550 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.59□□□□□ -0.55
PIK3C3-211ENST00000589550 BBXQ8WY36 941 aaPredicted RBP11.57□□□□□ -0.56
PIK3C3-211ENST00000589550 REM2Q8IYK8 340 aaPredicted RBP11.54□□□□□ -0.56
PIK3C3-211ENST00000589550 KLHL34Q8N239 644 aa11.54□□□□□ -0.56
PIK3C3-211ENST00000589550 ECM2O94769 699 aaPredicted RBP11.52□□□□□ -0.57
PIK3C3-211ENST00000589550 STAG3Q9UJ98 1225 aa11.52□□□□□ -0.57
PIK3C3-211ENST00000589550 TAOK2Q9UL54 1235 aa11.51□□□□□ -0.57
PIK3C3-211ENST00000589550 PIP4P2Q8N4L2 257 aa11.49□□□□□ -0.57
PIK3C3-211ENST00000589550 OSCARQ8IYS5 282 aa11.48□□□□□ -0.57
PIK3C3-211ENST00000589550 PAXIP1Q6ZW49 1069 aaPredicted RBP11.43□□□□□ -0.58
PIK3C3-211ENST00000589550 PRKCSHP14314 528 aaPredicted RBP11.42□□□□□ -0.58
PIK3C3-211ENST00000589550 PITPNM1O00562 1244 aa11.41□□□□□ -0.58
PIK3C3-211ENST00000589550 NPM1P06748 294 aaKnown RBP eCLIP11.41□□□□□ -0.58
PIK3C3-211ENST00000589550 FXR2P51116 673 aaKnown RBP eCLIP11.41□□□□□ -0.58
PIK3C3-211ENST00000589550 PLCD3Q8N3E9 789 aa11.41□□□□□ -0.58
PIK3C3-211ENST00000589550 CFAP44Q96MT7 982 aa11.4□□□□□ -0.58
PIK3C3-211ENST00000589550 ZNF692Q9BU19 519 aaPredicted RBP11.4□□□□□ -0.58
PIK3C3-211ENST00000589550 KDM2AQ9Y2K7 1162 aa11.4□□□□□ -0.58
PIK3C3-211ENST00000589550 SPDYE2BA6NHP3 402 aa11.38□□□□□ -0.59
PIK3C3-211ENST00000589550 SPDYE6P0CI01 402 aa11.38□□□□□ -0.59
PIK3C3-211ENST00000589550 SPDYE2Q495Y8 402 aa11.38□□□□□ -0.59
PIK3C3-211ENST00000589550 RGL2O15211 777 aa11.36□□□□□ -0.59
PIK3C3-211ENST00000589550 SPRYD3Q8NCJ5 442 aa11.36□□□□□ -0.59
PIK3C3-211ENST00000589550 HAX1O00165 279 aa11.35□□□□□ -0.59
PIK3C3-211ENST00000589550 SSUH2Q9Y2M2 353 aa11.35□□□□□ -0.59
PIK3C3-211ENST00000589550 TPRNQ4KMQ1 711 aa11.31□□□□□ -0.6
PIK3C3-211ENST00000589550 MIER1Q8N108 512 aa11.31□□□□□ -0.6
PIK3C3-211ENST00000589550 ZBTB47Q9UFB7 747 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms