RNA–Protein interactions for RNA: ENST00000583705.1

MSI2-217, Transcript of musashi RNA binding protein 2, humanhuman

Gene MSI2, Length 7,612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-217ENST00000583705 DCAF8L2P0C7V8 631 aa19.91■□□□□ 0.78
MSI2-217ENST00000583705 EHMT2Q96KQ7 1210 aa18.67■□□□□ 0.58
MSI2-217ENST00000583705 SUPT5HO00267 1087 aaKnown RBP18.32■□□□□ 0.52
MSI2-217ENST00000583705 PELP1Q8IZL8 1130 aaKnown RBP18.01■□□□□ 0.47
MSI2-217ENST00000583705 TTBK1Q5TCY1 1321 aaPredicted RBP17.96■□□□□ 0.47
MSI2-217ENST00000583705 SHROOM4Q9ULL8 1493 aa17.9■□□□□ 0.46
MSI2-217ENST00000583705 APLP2Q06481 763 aa17.86■□□□□ 0.45
MSI2-217ENST00000583705 FAM9AQ8IZU1 332 aaPredicted RBP17.77■□□□□ 0.44
MSI2-217ENST00000583705 RANGAP1P46060 587 aaPredicted RBP17.77■□□□□ 0.43
MSI2-217ENST00000583705 ATP1B4Q9UN42 357 aaPredicted RBP17.67■□□□□ 0.42
MSI2-217ENST00000583705 ERICH6Q7L0X2 663 aa17.66■□□□□ 0.42
MSI2-217ENST00000583705 PCGF6Q9BYE7 350 aa17.34■□□□□ 0.37
MSI2-217ENST00000583705 CCER1Q8TC90 406 aaPredicted RBP17.27■□□□□ 0.36
MSI2-217ENST00000583705 MYT1LQ9UL68 1186 aa17.27■□□□□ 0.36
MSI2-217ENST00000583705 CHIC1Q5VXU3 224 aa17.26■□□□□ 0.35
MSI2-217ENST00000583705 MYT1Q01538 1121 aa17.23■□□□□ 0.35
MSI2-217ENST00000583705 YTHDC1Q96MU7 727 aaKnown RBP17.07■□□□□ 0.32
MSI2-217ENST00000583705 POLR3GLQ9BT43 218 aa17.06■□□□□ 0.32
MSI2-217ENST00000583705 CNGB1Q14028 1251 aaPredicted RBP17.04■□□□□ 0.32
MSI2-217ENST00000583705 NEFLP07196 543 aa16.98■□□□□ 0.31
MSI2-217ENST00000583705 SLC4A1APQ9BWU0 796 aaKnown RBP16.96■□□□□ 0.31
MSI2-217ENST00000583705 CENPBP07199 599 aaPredicted RBP16.93■□□□□ 0.3
MSI2-217ENST00000583705 UBTFP17480 764 aaKnown RBP16.92■□□□□ 0.3
MSI2-217ENST00000583705 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.9■□□□□ 0.3
MSI2-217ENST00000583705 HNRNPUL2Q1KMD3 747 aaKnown RBP16.9■□□□□ 0.3
MSI2-217ENST00000583705 DAXXQ9UER7 740 aaPredicted RBP16.87■□□□□ 0.29
MSI2-217ENST00000583705 PPARGC1BQ86YN6 1023 aaKnown RBP16.84■□□□□ 0.29
MSI2-217ENST00000583705 ITGAEP38570 1179 aa16.75■□□□□ 0.27
MSI2-217ENST00000583705 TRIM41Q8WV44 630 aa16.73■□□□□ 0.27
MSI2-217ENST00000583705 SLC24A1O60721 1099 aa16.57■□□□□ 0.24
MSI2-217ENST00000583705 BCL11AQ9H165 835 aa16.57■□□□□ 0.24
MSI2-217ENST00000583705 CLSPNQ9HAW4 1339 aa16.52■□□□□ 0.24
MSI2-217ENST00000583705 ZEB1P37275 1124 aaPredicted RBP16.45■□□□□ 0.22
MSI2-217ENST00000583705 ZNF316A6NFI3 1004 aaPredicted RBP16.43■□□□□ 0.22
MSI2-217ENST00000583705 NISCHQ9Y2I1 1504 aa16.4■□□□□ 0.22
MSI2-217ENST00000583705 BCANQ96GW7 911 aa16.33■□□□□ 0.2
MSI2-217ENST00000583705 PLPPR3Q6T4P5 718 aa16.28■□□□□ 0.2
MSI2-217ENST00000583705 ZBTB47Q9UFB7 747 aaPredicted RBP16.19■□□□□ 0.18
MSI2-217ENST00000583705 RTL5Q5HYW3 569 aaPredicted RBP16.16■□□□□ 0.18
MSI2-217ENST00000583705 ZNF326Q5BKZ1 582 aaKnown RBP16.12■□□□□ 0.17
MSI2-217ENST00000583705 TRIM52Q96A61 297 aa16.11■□□□□ 0.17
MSI2-217ENST00000583705 FAM50AQ14320 339 aaKnown RBP16.08■□□□□ 0.17
MSI2-217ENST00000583705 FBLN2P98095 1184 aa16.06■□□□□ 0.16
MSI2-217ENST00000583705 NEUROD1Q13562 356 aa16.01■□□□□ 0.15
MSI2-217ENST00000583705 CANXP27824 592 aaKnown RBP16■□□□□ 0.15
MSI2-217ENST00000583705 A0A0G2JS52 829 aa15.94■□□□□ 0.14
MSI2-217ENST00000583705 ARID3CA6NKF2 412 aa15.89■□□□□ 0.13
MSI2-217ENST00000583705 NEFMP07197 916 aa15.88■□□□□ 0.13
MSI2-217ENST00000583705 SCAF1Q9H7N4 1312 aaKnown RBP15.88■□□□□ 0.13
MSI2-217ENST00000583705 TRIM26Q12899 539 aaPredicted RBP15.86■□□□□ 0.13
MSI2-217ENST00000583705 PLEKHG5O94827 1062 aa15.84■□□□□ 0.13
MSI2-217ENST00000583705 LOC105371045A0A1W2PR82 267 aa15.83■□□□□ 0.12
MSI2-217ENST00000583705 HRCP23327 699 aa15.81■□□□□ 0.12
MSI2-217ENST00000583705 ESF1Q9H501 851 aaKnown RBP15.81■□□□□ 0.12
MSI2-217ENST00000583705 STAG3Q9UJ98 1225 aa15.75■□□□□ 0.11
MSI2-217ENST00000583705 CHGAP10645 457 aaKnown RBP15.73■□□□□ 0.11
MSI2-217ENST00000583705 NPM2Q86SE8 214 aaKnown RBP15.71■□□□□ 0.1
MSI2-217ENST00000583705 SENP3Q9H4L4 574 aaPredicted RBP15.7■□□□□ 0.1
MSI2-217ENST00000583705 TULP1O00294 542 aaPredicted RBP15.67■□□□□ 0.1
MSI2-217ENST00000583705 ZNF777Q9ULD5 760 aaPredicted RBP15.67■□□□□ 0.1
MSI2-217ENST00000583705 ZBTB7CA1YPR0 619 aa15.66■□□□□ 0.1
MSI2-217ENST00000583705 DIEXFQ68CQ4 756 aaKnown RBP15.64■□□□□ 0.09
MSI2-217ENST00000583705 PABPN1Q86U42 306 aaKnown RBP eCLIP15.64■□□□□ 0.09
MSI2-217ENST00000583705 CDK11AQ9UQ88 783 aaPredicted RBP15.63■□□□□ 0.09
MSI2-217ENST00000583705 HSP90AA1P07900 732 aaKnown RBP15.63■□□□□ 0.09
MSI2-217ENST00000583705 ANP32CO43423 234 aa15.63■□□□□ 0.09
MSI2-217ENST00000583705 P3H3Q8IVL6 736 aa15.61■□□□□ 0.09
MSI2-217ENST00000583705 ARXQ96QS3 562 aa15.56■□□□□ 0.08
MSI2-217ENST00000583705 CDK11BP21127 795 aaKnown RBP15.54■□□□□ 0.08
MSI2-217ENST00000583705 SALL2Q9Y467 1007 aaPredicted RBP15.53■□□□□ 0.08
MSI2-217ENST00000583705 EIF5BO60841 1220 aaKnown RBP15.51■□□□□ 0.07
MSI2-217ENST00000583705 NCBP3Q53F19 620 aaKnown RBP15.51■□□□□ 0.07
MSI2-217ENST00000583705 ANP32BQ92688 251 aaKnown RBP15.5■□□□□ 0.07
MSI2-217ENST00000583705 C14orf37Q86TY3 774 aa15.49■□□□□ 0.07
MSI2-217ENST00000583705 ANP32AP39687 249 aaKnown RBP15.43■□□□□ 0.06
MSI2-217ENST00000583705 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.39■□□□□ 0.05
MSI2-217ENST00000583705 HAP1P54257 671 aaPredicted RBP15.39■□□□□ 0.05
MSI2-217ENST00000583705 TAOK2Q9UL54 1235 aa15.38■□□□□ 0.05
MSI2-217ENST00000583705 NPM1P06748 294 aaKnown RBP eCLIP15.37■□□□□ 0.05
MSI2-217ENST00000583705 TPRNQ4KMQ1 711 aa15.35■□□□□ 0.05
MSI2-217ENST00000583705 GTF3C3Q9Y5Q9 886 aa15.34■□□□□ 0.05
MSI2-217ENST00000583705 UPF2Q9HAU5 1272 aaKnown RBP15.32■□□□□ 0.04
MSI2-217ENST00000583705 NPHP1O15259 732 aa15.29■□□□□ 0.04
MSI2-217ENST00000583705 FAM9BQ8IZU0 186 aa15.26■□□□□ 0.03
MSI2-217ENST00000583705 ABCC9O60706 1549 aa15.24■□□□□ 0.03
MSI2-217ENST00000583705 NBR1Q14596 966 aa15.21■□□□□ 0.03
MSI2-217ENST00000583705 KDM2AQ9Y2K7 1162 aa15.21■□□□□ 0.03
MSI2-217ENST00000583705 ARID4BQ4LE39 1312 aaPredicted RBP15.19■□□□□ 0.02
MSI2-217ENST00000583705 LMOD2Q6P5Q4 547 aa15.17■□□□□ 0.02
MSI2-217ENST00000583705 PPP1R15AO75807 674 aaPredicted RBP15.15■□□□□ 0.02
MSI2-217ENST00000583705 CLSTN1O94985 981 aa15.14■□□□□ 0.01
MSI2-217ENST00000583705 MYH16Q9H6N6 1097 aa15.14■□□□□ 0.01
MSI2-217ENST00000583705 WDR43Q15061 677 aaKnown RBP eCLIP15.14■□□□□ 0.01
MSI2-217ENST00000583705 FKBP8Q14318 412 aa15.13■□□□□ 0.01
MSI2-217ENST00000583705 CHIC2Q9UKJ5 165 aa15.13■□□□□ 0.01
MSI2-217ENST00000583705 HNRNPUQ00839 825 aaKnown RBP eCLIP15.11■□□□□ 0.01
MSI2-217ENST00000583705 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.1■□□□□ 0.01
MSI2-217ENST00000583705 PPM1GO15355 546 aaPredicted RBP15.1■□□□□ 0.01
MSI2-217ENST00000583705 SENP3-EIF4A1A0A087X0R7 540 aa15.1■□□□□ 0.01
MSI2-217ENST00000583705 TMC1Q8TDI8 760 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 208.7 ms