RNA–Protein interactions for RNA: ENST00000559915.1

LINC02490-201, Transcript of long intergenic non-protein coding RNA 2490, humanhuman

TSL 3 BASIC

Gene LINC02490, Length 601 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02490-201ENST00000559915 CHIC1Q5VXU3 224 aa14.68□□□□□ -0.06
LINC02490-201ENST00000559915 AEBP2Q6ZN18 517 aaPredicted RBP14.43□□□□□ -0.1
LINC02490-201ENST00000559915 PHF23Q9BUL5 403 aaPredicted RBP13.07□□□□□ -0.32
LINC02490-201ENST00000559915 PLPPR3Q6T4P5 718 aa12.16□□□□□ -0.46
LINC02490-201ENST00000559915 SENP3Q9H4L4 574 aaPredicted RBP12□□□□□ -0.49
LINC02490-201ENST00000559915 ADRA2BP18089 450 aa11.49□□□□□ -0.57
LINC02490-201ENST00000559915 KCNA4P22459 653 aa11.38□□□□□ -0.59
LINC02490-201ENST00000559915 EHMT2Q96KQ7 1210 aa11.35□□□□□ -0.59
LINC02490-201ENST00000559915 PPP6R1Q9UPN7 881 aa11.32□□□□□ -0.6
LINC02490-201ENST00000559915 POTEDQ86YR6 584 aa11.24□□□□□ -0.61
LINC02490-201ENST00000559915 FOXD1Q16676 465 aa11.15□□□□□ -0.62
LINC02490-201ENST00000559915 CSRNP3Q8WYN3 585 aa11.02□□□□□ -0.65
LINC02490-201ENST00000559915 SLC4A1APQ9BWU0 796 aaKnown RBP10.9□□□□□ -0.66
LINC02490-201ENST00000559915 PPP4R3CPQ6ZMV5 832 aa10.85□□□□□ -0.67
LINC02490-201ENST00000559915 NCBP3Q53F19 620 aaKnown RBP10.67□□□□□ -0.7
LINC02490-201ENST00000559915 NPM3O75607 178 aaKnown RBP10.61□□□□□ -0.71
LINC02490-201ENST00000559915 PIAS4Q8N2W9 510 aaPredicted RBP10.59□□□□□ -0.71
LINC02490-201ENST00000559915 ZBTB22O15209 634 aa10.54□□□□□ -0.72
LINC02490-201ENST00000559915 CNKSR2Q8WXI2 1034 aa10.37□□□□□ -0.75
LINC02490-201ENST00000559915 MSH5O43196 834 aa10.29□□□□□ -0.76
LINC02490-201ENST00000559915 DNAJC5BQ9UF47 199 aa10.25□□□□□ -0.77
LINC02490-201ENST00000559915 SLC24A1O60721 1099 aa10.23□□□□□ -0.77
LINC02490-201ENST00000559915 FOXD4L1Q9NU39 408 aa10.22□□□□□ -0.77
LINC02490-201ENST00000559915 SCAF1Q9H7N4 1312 aaKnown RBP10.2□□□□□ -0.78
LINC02490-201ENST00000559915 RTN4Q9NQC3 1192 aaKnown RBP10.19□□□□□ -0.78
LINC02490-201ENST00000559915 AMER1Q5JTC6 1135 aaPredicted RBP10.1□□□□□ -0.79
LINC02490-201ENST00000559915 MAPK8IP2Q13387 824 aaPredicted RBP10.08□□□□□ -0.8
LINC02490-201ENST00000559915 RNF216Q9NWF9 866 aaPredicted RBP10□□□□□ -0.81
LINC02490-201ENST00000559915 SLC4A2P04920 1241 aa9.91□□□□□ -0.82
LINC02490-201ENST00000559915 HOXD11P31277 338 aaPredicted RBP9.83□□□□□ -0.84
LINC02490-201ENST00000559915 ATXN8OSP0DMR3 200 aa9.82□□□□□ -0.84
LINC02490-201ENST00000559915 FKBP8Q14318 412 aa9.82□□□□□ -0.84
LINC02490-201ENST00000559915 DMRT2Q9Y5R5 561 aa9.74□□□□□ -0.85
LINC02490-201ENST00000559915 MYCNP04198 464 aaPredicted RBP9.72□□□□□ -0.85
LINC02490-201ENST00000559915 ATF5Q9Y2D1 282 aaPredicted RBP9.54□□□□□ -0.88
LINC02490-201ENST00000559915 PLCB2Q00722 1185 aa9.34□□□□□ -0.91
LINC02490-201ENST00000559915 SAMD1Q6SPF0 538 aaPredicted RBP9.29□□□□□ -0.92
LINC02490-201ENST00000559915 U3KPZ7 1027 aaPredicted RBP9.28□□□□□ -0.92
LINC02490-201ENST00000559915 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.27□□□□□ -0.93
LINC02490-201ENST00000559915 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.26□□□□□ -0.93
LINC02490-201ENST00000559915 HNRNPUL2Q1KMD3 747 aaKnown RBP9.26□□□□□ -0.93
LINC02490-201ENST00000559915 CACNB1Q02641 598 aaPredicted RBP9.25□□□□□ -0.93
LINC02490-201ENST00000559915 FBXO3Q9UK99 471 aa9.24□□□□□ -0.93
LINC02490-201ENST00000559915 ZNF219Q9P2Y4 722 aaPredicted RBP9.22□□□□□ -0.93
LINC02490-201ENST00000559915 PROM2Q8N271 834 aa9.21□□□□□ -0.94
LINC02490-201ENST00000559915 SPDYE4A6NLX3 237 aa9.18□□□□□ -0.94
LINC02490-201ENST00000559915 DCAF8L1A6NGE4 600 aa9.17□□□□□ -0.94
LINC02490-201ENST00000559915 VASPP50552 380 aaPredicted RBP9.15□□□□□ -0.94
LINC02490-201ENST00000559915 HAP1P54257 671 aaPredicted RBP9.15□□□□□ -0.94
LINC02490-201ENST00000559915 MKRN4PQ13434 485 aaPredicted RBP9.15□□□□□ -0.94
LINC02490-201ENST00000559915 PRKCSHP14314 528 aaPredicted RBP9.14□□□□□ -0.95
LINC02490-201ENST00000559915 IFNLR1Q8IU57 520 aaPredicted RBP9.14□□□□□ -0.95
LINC02490-201ENST00000559915 BCANQ96GW7 911 aa9.11□□□□□ -0.95
LINC02490-201ENST00000559915 PKD2Q13563 968 aa9.1□□□□□ -0.95
LINC02490-201ENST00000559915 VSIG10Q8N0Z9 540 aa9.09□□□□□ -0.95
LINC02490-201ENST00000559915 TAOK2Q9UL54 1235 aa9.07□□□□□ -0.96
LINC02490-201ENST00000559915 KDM2AQ9Y2K7 1162 aa9.01□□□□□ -0.97
LINC02490-201ENST00000559915 DCAF8L2P0C7V8 631 aa9□□□□□ -0.97
LINC02490-201ENST00000559915 APLP2Q06481 763 aa8.96□□□□□ -0.98
LINC02490-201ENST00000559915 NPM1P06748 294 aaKnown RBP eCLIP8.95□□□□□ -0.98
LINC02490-201ENST00000559915 FBLN2P98095 1184 aa8.93□□□□□ -0.98
LINC02490-201ENST00000559915 BBXQ8WY36 941 aaPredicted RBP8.93□□□□□ -0.98
LINC02490-201ENST00000559915 TPRNQ4KMQ1 711 aa8.9□□□□□ -0.98
LINC02490-201ENST00000559915 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.87□□□□□ -0.99
LINC02490-201ENST00000559915 POLA2Q14181 598 aa8.86□□□□□ -0.99
LINC02490-201ENST00000559915 PAXIP1Q6ZW49 1069 aaPredicted RBP8.86□□□□□ -0.99
LINC02490-201ENST00000559915 SPOCK2Q92563 424 aa8.84□□□□□ -0.99
LINC02490-201ENST00000559915 ECM2O94769 699 aaPredicted RBP8.83□□□□□ -1
LINC02490-201ENST00000559915 SPINK5Q9NQ38 1064 aaPredicted RBP8.83□□□□□ -1
LINC02490-201ENST00000559915 CFAP44Q96MT7 982 aa8.81□□□□□ -1
LINC02490-201ENST00000559915 TRHP20396 242 aaPredicted RBP8.8□□□□□ -1
LINC02490-201ENST00000559915 TSHZ2Q9NRE2 1034 aa8.8□□□□□ -1
LINC02490-201ENST00000559915 RGL2O15211 777 aa8.79□□□□□ -1
LINC02490-201ENST00000559915 KLHL34Q8N239 644 aa8.78□□□□□ -1
LINC02490-201ENST00000559915 SPRYD3Q8NCJ5 442 aa8.76□□□□□ -1.01
LINC02490-201ENST00000559915 RNF39Q9H2S5 420 aa8.74□□□□□ -1.01
LINC02490-201ENST00000559915 DNAJC5Q9H3Z4 198 aa8.72□□□□□ -1.01
LINC02490-201ENST00000559915 STAG3Q9UJ98 1225 aa8.71□□□□□ -1.02
LINC02490-201ENST00000559915 CAPN15O75808 1086 aa8.67□□□□□ -1.02
LINC02490-201ENST00000559915 POTEHQ6S545 545 aa8.67□□□□□ -1.02
LINC02490-201ENST00000559915 ZBTB12Q9Y330 459 aaPredicted RBP8.66□□□□□ -1.02
LINC02490-201ENST00000559915 CHGAP10645 457 aaKnown RBP8.63□□□□□ -1.03
LINC02490-201ENST00000559915 PLCD3Q8N3E9 789 aa8.63□□□□□ -1.03
LINC02490-201ENST00000559915 MIER1Q8N108 512 aa8.62□□□□□ -1.03
LINC02490-201ENST00000559915 ZNF692Q9BU19 519 aaPredicted RBP8.62□□□□□ -1.03
LINC02490-201ENST00000559915 SSUH2Q9Y2M2 353 aa8.6□□□□□ -1.03
LINC02490-201ENST00000559915 ABCB7O75027 752 aa8.59□□□□□ -1.03
LINC02490-201ENST00000559915 TIMELESSQ9UNS1 1208 aa8.57□□□□□ -1.04
LINC02490-201ENST00000559915 C1QBPQ07021 282 aaKnown RBP8.56□□□□□ -1.04
LINC02490-201ENST00000559915 HS6ST3Q8IZP7 471 aa8.56□□□□□ -1.04
LINC02490-201ENST00000559915 CIZ1Q9ULV3 898 aaPredicted RBP8.56□□□□□ -1.04
LINC02490-201ENST00000559915 SPDYE2BA6NHP3 402 aa8.55□□□□□ -1.04
LINC02490-201ENST00000559915 SPDYE6P0CI01 402 aa8.55□□□□□ -1.04
LINC02490-201ENST00000559915 NBR1Q14596 966 aa8.55□□□□□ -1.04
LINC02490-201ENST00000559915 SPDYE2Q495Y8 402 aa8.55□□□□□ -1.04
LINC02490-201ENST00000559915 PABPN1Q86U42 306 aaKnown RBP eCLIP8.54□□□□□ -1.04
LINC02490-201ENST00000559915 TULP1O00294 542 aaPredicted RBP8.51□□□□□ -1.05
LINC02490-201ENST00000559915 NKX1-1Q15270 411 aaPredicted RBP8.5□□□□□ -1.05
LINC02490-201ENST00000559915 OSCARQ8IYS5 282 aa8.5□□□□□ -1.05
LINC02490-201ENST00000559915 TRIM41Q8WV44 630 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms