RNA–Protein interactions for RNA: ENST00000559825.1

AC023906.3-201, humanhuman

TSL 5 BASIC

Gene AC023906.3, Length 874 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC023906.3-201ENST00000559825 CHIC1Q5VXU3 224 aa27.96■■■□□ 2.07
AC023906.3-201ENST00000559825 AEBP2Q6ZN18 517 aaPredicted RBP27.45■■□□□ 1.98
AC023906.3-201ENST00000559825 PHF23Q9BUL5 403 aaPredicted RBP24.73■■□□□ 1.55
AC023906.3-201ENST00000559825 PLPPR3Q6T4P5 718 aa23.23■■□□□ 1.31
AC023906.3-201ENST00000559825 SENP3Q9H4L4 574 aaPredicted RBP23.07■■□□□ 1.28
AC023906.3-201ENST00000559825 ADRA2BP18089 450 aa21.75■■□□□ 1.07
AC023906.3-201ENST00000559825 KCNA4P22459 653 aa21.52■■□□□ 1.04
AC023906.3-201ENST00000559825 EHMT2Q96KQ7 1210 aa21.51■■□□□ 1.03
AC023906.3-201ENST00000559825 PPP6R1Q9UPN7 881 aa21.44■■□□□ 1.02
AC023906.3-201ENST00000559825 FOXD1Q16676 465 aa21.29■■□□□ 1
AC023906.3-201ENST00000559825 SLC4A1APQ9BWU0 796 aaKnown RBP20.71■□□□□ 0.91
AC023906.3-201ENST00000559825 CSRNP3Q8WYN3 585 aa20.7■□□□□ 0.9
AC023906.3-201ENST00000559825 PPP4R3CPQ6ZMV5 832 aa20.64■□□□□ 0.89
AC023906.3-201ENST00000559825 NCBP3Q53F19 620 aaKnown RBP20.44■□□□□ 0.86
AC023906.3-201ENST00000559825 PIAS4Q8N2W9 510 aaPredicted RBP20.37■□□□□ 0.85
AC023906.3-201ENST00000559825 NPM3O75607 178 aaKnown RBP20.14■□□□□ 0.81
AC023906.3-201ENST00000559825 ZBTB22O15209 634 aa19.82■□□□□ 0.76
AC023906.3-201ENST00000559825 CNKSR2Q8WXI2 1034 aa19.78■□□□□ 0.76
AC023906.3-201ENST00000559825 SCAF1Q9H7N4 1312 aaKnown RBP19.64■□□□□ 0.73
AC023906.3-201ENST00000559825 POTEDQ86YR6 584 aa19.55■□□□□ 0.72
AC023906.3-201ENST00000559825 FOXD4L1Q9NU39 408 aa19.44■□□□□ 0.7
AC023906.3-201ENST00000559825 DNAJC5BQ9UF47 199 aa19.33■□□□□ 0.68
AC023906.3-201ENST00000559825 SLC24A1O60721 1099 aa19.19■□□□□ 0.66
AC023906.3-201ENST00000559825 MSH5O43196 834 aa19.17■□□□□ 0.66
AC023906.3-201ENST00000559825 MAPK8IP2Q13387 824 aaPredicted RBP19.17■□□□□ 0.66
AC023906.3-201ENST00000559825 RNF216Q9NWF9 866 aaPredicted RBP19.1■□□□□ 0.65
AC023906.3-201ENST00000559825 RTN4Q9NQC3 1192 aaKnown RBP19.09■□□□□ 0.65
AC023906.3-201ENST00000559825 AMER1Q5JTC6 1135 aaPredicted RBP19.07■□□□□ 0.64
AC023906.3-201ENST00000559825 SLC4A2P04920 1241 aa18.73■□□□□ 0.59
AC023906.3-201ENST00000559825 HOXD11P31277 338 aaPredicted RBP18.7■□□□□ 0.58
AC023906.3-201ENST00000559825 ATXN8OSP0DMR3 200 aa18.65■□□□□ 0.58
AC023906.3-201ENST00000559825 FKBP8Q14318 412 aa18.65■□□□□ 0.58
AC023906.3-201ENST00000559825 DMRT2Q9Y5R5 561 aa18.61■□□□□ 0.57
AC023906.3-201ENST00000559825 MYCNP04198 464 aaPredicted RBP18.57■□□□□ 0.56
AC023906.3-201ENST00000559825 ATF5Q9Y2D1 282 aaPredicted RBP18.02■□□□□ 0.48
AC023906.3-201ENST00000559825 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.85■□□□□ 0.45
AC023906.3-201ENST00000559825 HNRNPUL2Q1KMD3 747 aaKnown RBP17.85■□□□□ 0.45
AC023906.3-201ENST00000559825 SAMD1Q6SPF0 538 aaPredicted RBP17.85■□□□□ 0.45
AC023906.3-201ENST00000559825 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.85■□□□□ 0.45
AC023906.3-201ENST00000559825 DCAF8L1A6NGE4 600 aa17.79■□□□□ 0.44
AC023906.3-201ENST00000559825 U3KPZ7 1027 aaPredicted RBP17.68■□□□□ 0.42
AC023906.3-201ENST00000559825 FBXO3Q9UK99 471 aa17.64■□□□□ 0.41
AC023906.3-201ENST00000559825 ZNF219Q9P2Y4 722 aaPredicted RBP17.58■□□□□ 0.4
AC023906.3-201ENST00000559825 PLCB2Q00722 1185 aa17.56■□□□□ 0.4
AC023906.3-201ENST00000559825 SPDYE4A6NLX3 237 aa17.48■□□□□ 0.39
AC023906.3-201ENST00000559825 APLP2Q06481 763 aa17.38■□□□□ 0.37
AC023906.3-201ENST00000559825 VASPP50552 380 aaPredicted RBP17.36■□□□□ 0.37
AC023906.3-201ENST00000559825 HAP1P54257 671 aaPredicted RBP17.35■□□□□ 0.37
AC023906.3-201ENST00000559825 PROM2Q8N271 834 aa17.33■□□□□ 0.36
AC023906.3-201ENST00000559825 DCAF8L2P0C7V8 631 aa17.29■□□□□ 0.36
AC023906.3-201ENST00000559825 MKRN4PQ13434 485 aaPredicted RBP17.28■□□□□ 0.36
AC023906.3-201ENST00000559825 IFNLR1Q8IU57 520 aaPredicted RBP17.23■□□□□ 0.35
AC023906.3-201ENST00000559825 BCANQ96GW7 911 aa17.18■□□□□ 0.34
AC023906.3-201ENST00000559825 FBLN2P98095 1184 aa17.17■□□□□ 0.34
AC023906.3-201ENST00000559825 PKD2Q13563 968 aa17.12■□□□□ 0.33
AC023906.3-201ENST00000559825 VSIG10Q8N0Z9 540 aa17.1■□□□□ 0.33
AC023906.3-201ENST00000559825 PRKCSHP14314 528 aaPredicted RBP17.02■□□□□ 0.32
AC023906.3-201ENST00000559825 TAOK2Q9UL54 1235 aa16.97■□□□□ 0.31
AC023906.3-201ENST00000559825 TRHP20396 242 aaPredicted RBP16.94■□□□□ 0.3
AC023906.3-201ENST00000559825 POLA2Q14181 598 aa16.93■□□□□ 0.3
AC023906.3-201ENST00000559825 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.9■□□□□ 0.3
AC023906.3-201ENST00000559825 BBXQ8WY36 941 aaPredicted RBP16.88■□□□□ 0.29
AC023906.3-201ENST00000559825 SPINK5Q9NQ38 1064 aaPredicted RBP16.85■□□□□ 0.29
AC023906.3-201ENST00000559825 KLHL34Q8N239 644 aa16.83■□□□□ 0.28
AC023906.3-201ENST00000559825 SPOCK2Q92563 424 aa16.83■□□□□ 0.28
AC023906.3-201ENST00000559825 KDM2AQ9Y2K7 1162 aa16.81■□□□□ 0.28
AC023906.3-201ENST00000559825 ECM2O94769 699 aaPredicted RBP16.8■□□□□ 0.28
AC023906.3-201ENST00000559825 PAXIP1Q6ZW49 1069 aaPredicted RBP16.79■□□□□ 0.28
AC023906.3-201ENST00000559825 CACNB1Q02641 598 aaPredicted RBP16.78■□□□□ 0.28
AC023906.3-201ENST00000559825 NPM1P06748 294 aaKnown RBP eCLIP16.76■□□□□ 0.27
AC023906.3-201ENST00000559825 CFAP44Q96MT7 982 aa16.75■□□□□ 0.27
AC023906.3-201ENST00000559825 CAPN15O75808 1086 aa16.73■□□□□ 0.27
AC023906.3-201ENST00000559825 TPRNQ4KMQ1 711 aa16.72■□□□□ 0.27
AC023906.3-201ENST00000559825 ZBTB12Q9Y330 459 aaPredicted RBP16.71■□□□□ 0.27
AC023906.3-201ENST00000559825 STAG3Q9UJ98 1225 aa16.62■□□□□ 0.25
AC023906.3-201ENST00000559825 RGL2O15211 777 aa16.6■□□□□ 0.25
AC023906.3-201ENST00000559825 SPRYD3Q8NCJ5 442 aa16.6■□□□□ 0.25
AC023906.3-201ENST00000559825 PLCD3Q8N3E9 789 aa16.57■□□□□ 0.24
AC023906.3-201ENST00000559825 TSHZ2Q9NRE2 1034 aa16.54■□□□□ 0.24
AC023906.3-201ENST00000559825 ABCB7O75027 752 aa16.52■□□□□ 0.24
AC023906.3-201ENST00000559825 ZNF692Q9BU19 519 aaPredicted RBP16.52■□□□□ 0.24
AC023906.3-201ENST00000559825 RNF39Q9H2S5 420 aa16.52■□□□□ 0.24
AC023906.3-201ENST00000559825 MIER1Q8N108 512 aa16.46■□□□□ 0.23
AC023906.3-201ENST00000559825 CHGAP10645 457 aaKnown RBP16.41■□□□□ 0.22
AC023906.3-201ENST00000559825 C1QBPQ07021 282 aaKnown RBP16.39■□□□□ 0.21
AC023906.3-201ENST00000559825 CIZ1Q9ULV3 898 aaPredicted RBP16.38■□□□□ 0.21
AC023906.3-201ENST00000559825 SPDYE2BA6NHP3 402 aa16.36■□□□□ 0.21
AC023906.3-201ENST00000559825 SPDYE6P0CI01 402 aa16.36■□□□□ 0.21
AC023906.3-201ENST00000559825 SPDYE2Q495Y8 402 aa16.36■□□□□ 0.21
AC023906.3-201ENST00000559825 SSUH2Q9Y2M2 353 aa16.36■□□□□ 0.21
AC023906.3-201ENST00000559825 PABPN1Q86U42 306 aaKnown RBP eCLIP16.33■□□□□ 0.2
AC023906.3-201ENST00000559825 NBR1Q14596 966 aa16.29■□□□□ 0.2
AC023906.3-201ENST00000559825 OSCARQ8IYS5 282 aa16.29■□□□□ 0.2
AC023906.3-201ENST00000559825 DNAJC5Q9H3Z4 198 aa16.27■□□□□ 0.2
AC023906.3-201ENST00000559825 ZBTB47Q9UFB7 747 aaPredicted RBP16.27■□□□□ 0.2
AC023906.3-201ENST00000559825 PLEKHG5O94827 1062 aa16.26■□□□□ 0.19
AC023906.3-201ENST00000559825 TRIM41Q8WV44 630 aa16.24■□□□□ 0.19
AC023906.3-201ENST00000559825 HS6ST3Q8IZP7 471 aa16.21■□□□□ 0.19
AC023906.3-201ENST00000559825 DSG3P32926 999 aa16.15■□□□□ 0.18
AC023906.3-201ENST00000559825 GSE1Q14687 1217 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms