RNA–Protein interactions for RNA: ENST00000556283.1

PAPOLA-219, Transcript of poly(A) polymerase alpha, humanhuman

TSL 3

Gene PAPOLA, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPOLA-219ENST00000556283 AEBP2Q6ZN18 517 aaPredicted RBP21.51■■□□□ 1.03
PAPOLA-219ENST00000556283 CHIC1Q5VXU3 224 aa21.45■■□□□ 1.02
PAPOLA-219ENST00000556283 PHF23Q9BUL5 403 aaPredicted RBP19.02■□□□□ 0.64
PAPOLA-219ENST00000556283 SENP3Q9H4L4 574 aaPredicted RBP18.52■□□□□ 0.56
PAPOLA-219ENST00000556283 PLPPR3Q6T4P5 718 aa17.79■□□□□ 0.44
PAPOLA-219ENST00000556283 POTEDQ86YR6 584 aa17.38■□□□□ 0.37
PAPOLA-219ENST00000556283 FOXD1Q16676 465 aa17.32■□□□□ 0.36
PAPOLA-219ENST00000556283 ADRA2BP18089 450 aa16.74■□□□□ 0.27
PAPOLA-219ENST00000556283 MSH5O43196 834 aa16.54■□□□□ 0.24
PAPOLA-219ENST00000556283 KCNA4P22459 653 aa16.53■□□□□ 0.24
PAPOLA-219ENST00000556283 EHMT2Q96KQ7 1210 aa16.51■□□□□ 0.23
PAPOLA-219ENST00000556283 PPP6R1Q9UPN7 881 aa16.51■□□□□ 0.23
PAPOLA-219ENST00000556283 PIAS4Q8N2W9 510 aaPredicted RBP16.03■□□□□ 0.16
PAPOLA-219ENST00000556283 CSRNP3Q8WYN3 585 aa15.89■□□□□ 0.13
PAPOLA-219ENST00000556283 SLC4A1APQ9BWU0 796 aaKnown RBP15.87■□□□□ 0.13
PAPOLA-219ENST00000556283 PPP4R3CPQ6ZMV5 832 aa15.83■□□□□ 0.12
PAPOLA-219ENST00000556283 NCBP3Q53F19 620 aaKnown RBP15.61■□□□□ 0.09
PAPOLA-219ENST00000556283 NPM3O75607 178 aaKnown RBP15.46■□□□□ 0.07
PAPOLA-219ENST00000556283 ZBTB22O15209 634 aa15.25■□□□□ 0.03
PAPOLA-219ENST00000556283 CNKSR2Q8WXI2 1034 aa15.15■□□□□ 0.02
PAPOLA-219ENST00000556283 SCAF1Q9H7N4 1312 aaKnown RBP14.99□□□□□ -0.01
PAPOLA-219ENST00000556283 FOXD4L1Q9NU39 408 aa14.89□□□□□ -0.03
PAPOLA-219ENST00000556283 DNAJC5BQ9UF47 199 aa14.78□□□□□ -0.04
PAPOLA-219ENST00000556283 MAPK8IP2Q13387 824 aaPredicted RBP14.75□□□□□ -0.05
PAPOLA-219ENST00000556283 SLC24A1O60721 1099 aa14.66□□□□□ -0.06
PAPOLA-219ENST00000556283 CACNB1Q02641 598 aaPredicted RBP14.65□□□□□ -0.06
PAPOLA-219ENST00000556283 RTN4Q9NQC3 1192 aaKnown RBP14.65□□□□□ -0.06
PAPOLA-219ENST00000556283 RNF216Q9NWF9 866 aaPredicted RBP14.62□□□□□ -0.07
PAPOLA-219ENST00000556283 AMER1Q5JTC6 1135 aaPredicted RBP14.56□□□□□ -0.08
PAPOLA-219ENST00000556283 DMRT2Q9Y5R5 561 aa14.55□□□□□ -0.08
PAPOLA-219ENST00000556283 SLC4A2P04920 1241 aa14.4□□□□□ -0.1
PAPOLA-219ENST00000556283 HOXD11P31277 338 aaPredicted RBP14.33□□□□□ -0.12
PAPOLA-219ENST00000556283 FKBP8Q14318 412 aa14.29□□□□□ -0.12
PAPOLA-219ENST00000556283 ATXN8OSP0DMR3 200 aa14.25□□□□□ -0.13
PAPOLA-219ENST00000556283 MYCNP04198 464 aaPredicted RBP14.22□□□□□ -0.13
PAPOLA-219ENST00000556283 DCAF8L1A6NGE4 600 aa14.03□□□□□ -0.16
PAPOLA-219ENST00000556283 RNF39Q9H2S5 420 aa14.02□□□□□ -0.17
PAPOLA-219ENST00000556283 ATF5Q9Y2D1 282 aaPredicted RBP13.87□□□□□ -0.19
PAPOLA-219ENST00000556283 C1QBPQ07021 282 aaKnown RBP13.79□□□□□ -0.2
PAPOLA-219ENST00000556283 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.67□□□□□ -0.224e-6■□□□□ 9.1
PAPOLA-219ENST00000556283 SAMD1Q6SPF0 538 aaPredicted RBP13.64□□□□□ -0.23
PAPOLA-219ENST00000556283 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.61□□□□□ -0.23
PAPOLA-219ENST00000556283 HNRNPUL2Q1KMD3 747 aaKnown RBP13.61□□□□□ -0.23
PAPOLA-219ENST00000556283 U3KPZ7 1027 aaPredicted RBP13.59□□□□□ -0.23
PAPOLA-219ENST00000556283 POTEHQ6S545 545 aa13.48□□□□□ -0.25
PAPOLA-219ENST00000556283 ZNF219Q9P2Y4 722 aaPredicted RBP13.47□□□□□ -0.25
PAPOLA-219ENST00000556283 FBXO3Q9UK99 471 aa13.45□□□□□ -0.26
PAPOLA-219ENST00000556283 PLCB2Q00722 1185 aa13.44□□□□□ -0.26
PAPOLA-219ENST00000556283 SPDYE4A6NLX3 237 aa13.39□□□□□ -0.27
PAPOLA-219ENST00000556283 VASPP50552 380 aaPredicted RBP13.3□□□□□ -0.28
PAPOLA-219ENST00000556283 MKRN4PQ13434 485 aaPredicted RBP13.29□□□□□ -0.28
PAPOLA-219ENST00000556283 PROM2Q8N271 834 aa13.29□□□□□ -0.28
PAPOLA-219ENST00000556283 HAP1P54257 671 aaPredicted RBP13.27□□□□□ -0.29
PAPOLA-219ENST00000556283 APLP2Q06481 763 aa13.23□□□□□ -0.29
PAPOLA-219ENST00000556283 DCAF8L2P0C7V8 631 aa13.22□□□□□ -0.29
PAPOLA-219ENST00000556283 IFNLR1Q8IU57 520 aaPredicted RBP13.22□□□□□ -0.29
PAPOLA-219ENST00000556283 PKD2Q13563 968 aa13.13□□□□□ -0.31
PAPOLA-219ENST00000556283 FBLN2P98095 1184 aa13.12□□□□□ -0.31
PAPOLA-219ENST00000556283 BCANQ96GW7 911 aa13.1□□□□□ -0.31
PAPOLA-219ENST00000556283 PRKCSHP14314 528 aaPredicted RBP13.08□□□□□ -0.32
PAPOLA-219ENST00000556283 VSIG10Q8N0Z9 540 aa13.04□□□□□ -0.32
PAPOLA-219ENST00000556283 TRHP20396 242 aaPredicted RBP13□□□□□ -0.33
PAPOLA-219ENST00000556283 TAOK2Q9UL54 1235 aa12.99□□□□□ -0.33
PAPOLA-219ENST00000556283 POLA2Q14181 598 aa12.98□□□□□ -0.33
PAPOLA-219ENST00000556283 SPINK5Q9NQ38 1064 aaPredicted RBP12.97□□□□□ -0.33
PAPOLA-219ENST00000556283 KDM2AQ9Y2K7 1162 aa12.9□□□□□ -0.34
PAPOLA-219ENST00000556283 BBXQ8WY36 941 aaPredicted RBP12.89□□□□□ -0.35
PAPOLA-219ENST00000556283 NPM1P06748 294 aaKnown RBP eCLIP12.88□□□□□ -0.35
PAPOLA-219ENST00000556283 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.88□□□□□ -0.35
PAPOLA-219ENST00000556283 DSG3P32926 999 aa12.87□□□□□ -0.35
PAPOLA-219ENST00000556283 SPOCK2Q92563 424 aa12.87□□□□□ -0.35
PAPOLA-219ENST00000556283 ECM2O94769 699 aaPredicted RBP12.86□□□□□ -0.35
PAPOLA-219ENST00000556283 KLHL34Q8N239 644 aa12.86□□□□□ -0.35
PAPOLA-219ENST00000556283 PAXIP1Q6ZW49 1069 aaPredicted RBP12.85□□□□□ -0.35
PAPOLA-219ENST00000556283 CAPN15O75808 1086 aa12.83□□□□□ -0.36
PAPOLA-219ENST00000556283 CFAP44Q96MT7 982 aa12.82□□□□□ -0.36
PAPOLA-219ENST00000556283 TPRNQ4KMQ1 711 aa12.8□□□□□ -0.36
PAPOLA-219ENST00000556283 ZBTB12Q9Y330 459 aaPredicted RBP12.75□□□□□ -0.37
PAPOLA-219ENST00000556283 RGL2O15211 777 aa12.74□□□□□ -0.37
PAPOLA-219ENST00000556283 ABCB7O75027 752 aa12.71□□□□□ -0.37
PAPOLA-219ENST00000556283 TSHZ2Q9NRE2 1034 aa12.69□□□□□ -0.38
PAPOLA-219ENST00000556283 STAG3Q9UJ98 1225 aa12.69□□□□□ -0.38
PAPOLA-219ENST00000556283 SPRYD3Q8NCJ5 442 aa12.68□□□□□ -0.38
PAPOLA-219ENST00000556283 PLCD3Q8N3E9 789 aa12.67□□□□□ -0.38
PAPOLA-219ENST00000556283 ZNF692Q9BU19 519 aaPredicted RBP12.64□□□□□ -0.39
PAPOLA-219ENST00000556283 MIER1Q8N108 512 aa12.59□□□□□ -0.39
PAPOLA-219ENST00000556283 CHGAP10645 457 aaKnown RBP12.57□□□□□ -0.4
PAPOLA-219ENST00000556283 SSUH2Q9Y2M2 353 aa12.55□□□□□ -0.4
PAPOLA-219ENST00000556283 CIZ1Q9ULV3 898 aaPredicted RBP12.54□□□□□ -0.4
PAPOLA-219ENST00000556283 OSCARQ8IYS5 282 aa12.53□□□□□ -0.4
PAPOLA-219ENST00000556283 SPDYE2BA6NHP3 402 aa12.52□□□□□ -0.41
PAPOLA-219ENST00000556283 SPDYE6P0CI01 402 aa12.52□□□□□ -0.41
PAPOLA-219ENST00000556283 SPDYE2Q495Y8 402 aa12.52□□□□□ -0.41
PAPOLA-219ENST00000556283 PABPN1Q86U42 306 aaKnown RBP eCLIP12.52□□□□□ -0.41
PAPOLA-219ENST00000556283 DNAJC5Q9H3Z4 198 aa12.46□□□□□ -0.41
PAPOLA-219ENST00000556283 NBR1Q14596 966 aa12.43□□□□□ -0.42
PAPOLA-219ENST00000556283 HS6ST3Q8IZP7 471 aa12.41□□□□□ -0.42
PAPOLA-219ENST00000556283 ZBTB47Q9UFB7 747 aaPredicted RBP12.4□□□□□ -0.42
PAPOLA-219ENST00000556283 PLEKHG5O94827 1062 aa12.38□□□□□ -0.43
PAPOLA-219ENST00000556283 TRIM41Q8WV44 630 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms