RNA–Protein interactions for RNA: ENST00000550910.1

PCBP2-220, Transcript of poly(rC) binding protein 2, humanhuman

TSL 3

Gene PCBP2, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP2-220ENST00000550910 AEBP2Q6ZN18 517 aaPredicted RBP18.22■□□□□ 0.51
PCBP2-220ENST00000550910 CHIC1Q5VXU3 224 aa17.55■□□□□ 0.4
PCBP2-220ENST00000550910 SENP3Q9H4L4 574 aaPredicted RBP15.68■□□□□ 0.1
PCBP2-220ENST00000550910 POTEDQ86YR6 584 aa15.67■□□□□ 0.1
PCBP2-220ENST00000550910 PHF23Q9BUL5 403 aaPredicted RBP15.43■□□□□ 0.06
PCBP2-220ENST00000550910 FOXD1Q16676 465 aa14.77□□□□□ -0.05
PCBP2-220ENST00000550910 PLPPR3Q6T4P5 718 aa14.57□□□□□ -0.08
PCBP2-220ENST00000550910 MSH5O43196 834 aa14.19□□□□□ -0.14
PCBP2-220ENST00000550910 PIAS4Q8N2W9 510 aaPredicted RBP13.59□□□□□ -0.23
PCBP2-220ENST00000550910 ADRA2BP18089 450 aa13.48□□□□□ -0.25
PCBP2-220ENST00000550910 PPP6R1Q9UPN7 881 aa13.38□□□□□ -0.27
PCBP2-220ENST00000550910 KCNA4P22459 653 aa13.23□□□□□ -0.29
PCBP2-220ENST00000550910 EHMT2Q96KQ7 1210 aa13.03□□□□□ -0.32
PCBP2-220ENST00000550910 CACNB1Q02641 598 aaPredicted RBP12.88□□□□□ -0.35
PCBP2-220ENST00000550910 PPP4R3CPQ6ZMV5 832 aa12.86□□□□□ -0.35
PCBP2-220ENST00000550910 NCBP3Q53F19 620 aaKnown RBP12.79□□□□□ -0.36
PCBP2-220ENST00000550910 SLC4A1APQ9BWU0 796 aaKnown RBP12.75□□□□□ -0.37
PCBP2-220ENST00000550910 CSRNP3Q8WYN3 585 aa12.63□□□□□ -0.39
PCBP2-220ENST00000550910 NPM3O75607 178 aaKnown RBP12.51□□□□□ -0.41
PCBP2-220ENST00000550910 SCAF1Q9H7N4 1312 aaKnown RBP12.42□□□□□ -0.42
PCBP2-220ENST00000550910 CNKSR2Q8WXI2 1034 aa12.42□□□□□ -0.42
PCBP2-220ENST00000550910 DMRT2Q9Y5R5 561 aa12.26□□□□□ -0.45
PCBP2-220ENST00000550910 MAPK8IP2Q13387 824 aaPredicted RBP12.22□□□□□ -0.45
PCBP2-220ENST00000550910 DNAJC5BQ9UF47 199 aa12.2□□□□□ -0.46
PCBP2-220ENST00000550910 ZBTB22O15209 634 aa12.15□□□□□ -0.46
PCBP2-220ENST00000550910 POTEHQ6S545 545 aa12.07□□□□□ -0.48
PCBP2-220ENST00000550910 FOXD4L1Q9NU39 408 aa12.07□□□□□ -0.48
PCBP2-220ENST00000550910 RNF216Q9NWF9 866 aaPredicted RBP12.03□□□□□ -0.48
PCBP2-220ENST00000550910 RNF39Q9H2S5 420 aa12.01□□□□□ -0.49
PCBP2-220ENST00000550910 DCAF8L1A6NGE4 600 aa11.98□□□□□ -0.49
PCBP2-220ENST00000550910 HOXD11P31277 338 aaPredicted RBP11.8□□□□□ -0.52
PCBP2-220ENST00000550910 C1QBPQ07021 282 aaKnown RBP11.76□□□□□ -0.53
PCBP2-220ENST00000550910 ATXN8OSP0DMR3 200 aa11.66□□□□□ -0.54
PCBP2-220ENST00000550910 SLC4A2P04920 1241 aa11.64□□□□□ -0.55
PCBP2-220ENST00000550910 MYCNP04198 464 aaPredicted RBP11.61□□□□□ -0.55
PCBP2-220ENST00000550910 AMER1Q5JTC6 1135 aaPredicted RBP11.56□□□□□ -0.56
PCBP2-220ENST00000550910 RTN4Q9NQC3 1192 aaKnown RBP11.43□□□□□ -0.58
PCBP2-220ENST00000550910 SLC24A1O60721 1099 aa11.4□□□□□ -0.58
PCBP2-220ENST00000550910 FKBP8Q14318 412 aa11.38□□□□□ -0.59
PCBP2-220ENST00000550910 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.29□□□□□ -0.6
PCBP2-220ENST00000550910 HNRNPUL2Q1KMD3 747 aaKnown RBP11.29□□□□□ -0.6
PCBP2-220ENST00000550910 SAMD1Q6SPF0 538 aaPredicted RBP11.24□□□□□ -0.61
PCBP2-220ENST00000550910 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.21□□□□□ -0.616e-13■□□□□ 11
PCBP2-220ENST00000550910 ATF5Q9Y2D1 282 aaPredicted RBP11.12□□□□□ -0.63
PCBP2-220ENST00000550910 U3KPZ7 1027 aaPredicted RBP11.09□□□□□ -0.63
PCBP2-220ENST00000550910 APLP2Q06481 763 aa11.04□□□□□ -0.64
PCBP2-220ENST00000550910 ZNF219Q9P2Y4 722 aaPredicted RBP10.96□□□□□ -0.65
PCBP2-220ENST00000550910 DSG3P32926 999 aa10.92□□□□□ -0.66
PCBP2-220ENST00000550910 FBXO3Q9UK99 471 aa10.92□□□□□ -0.66
PCBP2-220ENST00000550910 SPDYE4A6NLX3 237 aa10.82□□□□□ -0.68
PCBP2-220ENST00000550910 SP7Q8TDD2 431 aaPredicted RBP10.82□□□□□ -0.68
PCBP2-220ENST00000550910 CAPN15O75808 1086 aa10.81□□□□□ -0.68
PCBP2-220ENST00000550910 PROM2Q8N271 834 aa10.77□□□□□ -0.69
PCBP2-220ENST00000550910 SPINK5Q9NQ38 1064 aaPredicted RBP10.76□□□□□ -0.69
PCBP2-220ENST00000550910 FBLN2P98095 1184 aa10.75□□□□□ -0.69
PCBP2-220ENST00000550910 MKRN4PQ13434 485 aaPredicted RBP10.71□□□□□ -0.69
PCBP2-220ENST00000550910 VASPP50552 380 aaPredicted RBP10.69□□□□□ -0.7
PCBP2-220ENST00000550910 CHRDL2Q6WN34 429 aa10.65□□□□□ -0.7
PCBP2-220ENST00000550910 PLCB2Q00722 1185 aa10.6□□□□□ -0.71
PCBP2-220ENST00000550910 TRHP20396 242 aaPredicted RBP10.59□□□□□ -0.71
PCBP2-220ENST00000550910 ZBTB12Q9Y330 459 aaPredicted RBP10.59□□□□□ -0.71
PCBP2-220ENST00000550910 POLA2Q14181 598 aa10.58□□□□□ -0.72
PCBP2-220ENST00000550910 IFNLR1Q8IU57 520 aaPredicted RBP10.54□□□□□ -0.72
PCBP2-220ENST00000550910 ABCB7O75027 752 aa10.49□□□□□ -0.73
PCBP2-220ENST00000550910 PLSCR2Q9NRY7 297 aa10.49□□□□□ -0.73
PCBP2-220ENST00000550910 DCAF8L2P0C7V8 631 aa10.44□□□□□ -0.74
PCBP2-220ENST00000550910 PKD2Q13563 968 aa10.44□□□□□ -0.74
PCBP2-220ENST00000550910 RBM42Q9BTD8 480 aaKnown RBP10.43□□□□□ -0.74
PCBP2-220ENST00000550910 HAP1P54257 671 aaPredicted RBP10.4□□□□□ -0.74
PCBP2-220ENST00000550910 STAG3Q9UJ98 1225 aa10.39□□□□□ -0.75
PCBP2-220ENST00000550910 SPOCK2Q92563 424 aa10.38□□□□□ -0.75
PCBP2-220ENST00000550910 VSIG10Q8N0Z9 540 aa10.34□□□□□ -0.75
PCBP2-220ENST00000550910 KLHL34Q8N239 644 aa10.34□□□□□ -0.75
PCBP2-220ENST00000550910 HAX1O00165 279 aa10.32□□□□□ -0.76
PCBP2-220ENST00000550910 BCANQ96GW7 911 aa10.32□□□□□ -0.76
PCBP2-220ENST00000550910 SPDYE2BA6NHP3 402 aa10.31□□□□□ -0.76
PCBP2-220ENST00000550910 SPDYE6P0CI01 402 aa10.31□□□□□ -0.76
PCBP2-220ENST00000550910 SPDYE2Q495Y8 402 aa10.31□□□□□ -0.76
PCBP2-220ENST00000550910 ZNF692Q9BU19 519 aaPredicted RBP10.31□□□□□ -0.76
PCBP2-220ENST00000550910 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.31□□□□□ -0.76
PCBP2-220ENST00000550910 BBXQ8WY36 941 aaPredicted RBP10.3□□□□□ -0.76
PCBP2-220ENST00000550910 ECM2O94769 699 aaPredicted RBP10.28□□□□□ -0.76
PCBP2-220ENST00000550910 SSUH2Q9Y2M2 353 aa10.27□□□□□ -0.77
PCBP2-220ENST00000550910 PLCD3Q8N3E9 789 aa10.25□□□□□ -0.77
PCBP2-220ENST00000550910 OSCARQ8IYS5 282 aa10.19□□□□□ -0.78
PCBP2-220ENST00000550910 ZBTB47Q9UFB7 747 aaPredicted RBP10.19□□□□□ -0.78
PCBP2-220ENST00000550910 PLEKHG5O94827 1062 aa10.17□□□□□ -0.78
PCBP2-220ENST00000550910 PABPN1Q86U42 306 aaKnown RBP eCLIP10.17□□□□□ -0.78
PCBP2-220ENST00000550910 MIER1Q8N108 512 aa10.17□□□□□ -0.78
PCBP2-220ENST00000550910 PIP4P2Q8N4L2 257 aa10.17□□□□□ -0.78
PCBP2-220ENST00000550910 LHX8Q68G74 356 aa10.15□□□□□ -0.78
PCBP2-220ENST00000550910 PAXIP1Q6ZW49 1069 aaPredicted RBP10.15□□□□□ -0.78
PCBP2-220ENST00000550910 NPM1P06748 294 aaKnown RBP eCLIP10.14□□□□□ -0.79
PCBP2-220ENST00000550910 RGL2O15211 777 aa10.13□□□□□ -0.79
PCBP2-220ENST00000550910 TRIM41Q8WV44 630 aa10.13□□□□□ -0.79
PCBP2-220ENST00000550910 SPRYD3Q8NCJ5 442 aa10.11□□□□□ -0.79
PCBP2-220ENST00000550910 CFAP44Q96MT7 982 aa10.11□□□□□ -0.79
PCBP2-220ENST00000550910 TAOK2Q9UL54 1235 aa10.11□□□□□ -0.79
PCBP2-220ENST00000550910 EVX2Q03828 476 aa10.08□□□□□ -0.8
PCBP2-220ENST00000550910 KDM2AQ9Y2K7 1162 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms